RNA–Protein interactions for RNA: ENST00000434583.5

TRNT1-208, Transcript of tRNA nucleotidyl transferase 1, human

TSL 2

Gene TRNT1, Length 1,871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRNT1-208	ENST00000434583	PDIA6	Q15084	440 aa		12.82	□□□□□ -0.36
TRNT1-208	ENST00000434583	AGBL3	Q8NEM8	1001 aa		12.82	□□□□□ -0.36
TRNT1-208	ENST00000434583	THUMPD2	Q9BTF0	503 aa	Known RBP	12.82	□□□□□ -0.36
TRNT1-208	ENST00000434583	PCGF6	Q9BYE7	350 aa		12.82	□□□□□ -0.36
TRNT1-208	ENST00000434583	PPP2R1A	P30153	589 aa		12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583	SF3B3	Q15393	1217 aa	Known RBP	12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583	INTS3	Q68E01	1043 aa	Known RBP	12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583	ZC3H12C	Q9C0D7	883 aa	Known RBP	12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583	POLL	Q9UGP5	575 aa		12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583	RBBP6	Q7Z6E9	1792 aa	Known RBP	12.81	□□□□□ -0.36
TRNT1-208	ENST00000434583		G3V3G9	751 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	FKTN	O75072	461 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	SCARF1	Q14162	830 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	DOK7	Q18PE1	504 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	DCAF8	Q5TAQ9	597 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	ANGEL2	Q5VTE6	544 aa	Known RBP	12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	EIF2S2	P20042	333 aa	Known RBP	12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	GPSM2	P81274	684 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	SREBF2	Q12772	1141 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	COPS6	Q7L5N1	327 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	PNN	Q9H307	717 aa	Known RBP	12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	KCNQ5	Q9NR82	932 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	BABAM1	Q9NWV8	329 aa		12.8	□□□□□ -0.36
TRNT1-208	ENST00000434583	NFE2L2	Q16236	605 aa		12.79	□□□□□ -0.36
TRNT1-208	ENST00000434583	TBC1D16	Q8TBP0	767 aa		12.79	□□□□□ -0.36
TRNT1-208	ENST00000434583	CELF1	Q92879	486 aa	Known RBP	12.79	□□□□□ -0.36
TRNT1-208	ENST00000434583	PODXL2	Q9NZ53	605 aa		12.79	□□□□□ -0.36
TRNT1-208	ENST00000434583	RSBN1L	Q6PCB5	846 aa	Predicted RBP	12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	TSPYL4	Q9UJ04	414 aa		12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	ASTN2	O75129	1339 aa	Predicted RBP	12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	ALDH1A1	P00352	501 aa		12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	NF2	P35240	595 aa		12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	XAGE3	Q8WTP9	111 aa		12.78	□□□□□ -0.36
TRNT1-208	ENST00000434583	UBE2Q2L	H0YL09	131 aa		12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	USP17L8	P0C7I0	530 aa		12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	RPS8	P62241	208 aa	Known RBP	12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	AIMP1	Q12904	312 aa	Known RBP	12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	PROSER3	Q2NL68	480 aa		12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	MYOZ2	Q9NPC6	264 aa		12.77	□□□□□ -0.37
TRNT1-208	ENST00000434583	ANXA1	P04083	346 aa		12.76	□□□□□ -0.37
TRNT1-208	ENST00000434583	PLEKHF1	Q96S99	279 aa		12.76	□□□□□ -0.37
TRNT1-208	ENST00000434583	INHBE	P58166	350 aa		12.76	□□□□□ -0.37
TRNT1-208	ENST00000434583	TTLL12	Q14166	644 aa	Predicted RBP	12.76	□□□□□ -0.37
TRNT1-208	ENST00000434583	GML	Q99445	158 aa		12.76	□□□□□ -0.37
TRNT1-208	ENST00000434583	HSP90B1	P14625	803 aa	Known RBP	12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	MMP14	P50281	582 aa		12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	MOB2	Q70IA6	237 aa		12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	PLBD2	Q8NHP8	589 aa		12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	GGA1	Q9UJY5	639 aa		12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	MAPK8IP3	Q9UPT6	1336 aa		12.75	□□□□□ -0.37
TRNT1-208	ENST00000434583	UFL1	O94874	794 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	FXR1	P51114	621 aa	Known RBP eCLIP	12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	ARMC9	Q7Z3E5	817 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	ISCA1	Q9BUE6	129 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	LAMB1	P07942	1786 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	PODN	Q7Z5L7	613 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	FAM89A	Q96GI7	184 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	ANKIB1	Q9P2G1	1089 aa		12.74	□□□□□ -0.37
TRNT1-208	ENST00000434583	USP17L3	A6NCW0	530 aa		12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	USP17L4	A6NCW7	530 aa		12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	TRIM28	Q13263	835 aa	Known RBP	12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	ANKRD13D	Q6ZTN6	518 aa		12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	USP17L1	Q7RTZ2	530 aa		12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	TRIM17	Q9Y577	477 aa		12.73	□□□□□ -0.37
TRNT1-208	ENST00000434583	POTEF	A5A3E0	1075 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	MANSC4	A6NHS7	340 aa	Predicted RBP	12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	IRS4	O14654	1257 aa	Predicted RBP	12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	COL4A1	P02462	1669 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	SPRYD7	Q5W111	196 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	OTOP1	Q7RTM1	612 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	OGFOD1	Q8N543	542 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	ERO1A	Q96HE7	468 aa		12.72	□□□□□ -0.37
TRNT1-208	ENST00000434583	MYO3B	Q8WXR4	1341 aa		12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	ATP2B4	P23634	1241 aa		12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	PTPN12	Q05209	780 aa	Known RBP	12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	LMOD3	Q0VAK6	560 aa		12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	LDLRAD1	Q5T700	205 aa		12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	R3HDML	Q9H3Y0	253 aa		12.71	□□□□□ -0.37
TRNT1-208	ENST00000434583	XDH	P47989	1333 aa		12.71	□□□□□ -0.38
TRNT1-208	ENST00000434583	MKRN3	Q13064	507 aa	Known RBP	12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	NBPF9	Q3BBW0	867 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	PTPN22	Q9Y2R2	807 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	UNCX	A6NJT0	531 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	PRAMEF18	Q5VWM3	479 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	IFNL1	Q8IU54	200 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	APOBEC3F	Q8IUX4	373 aa	Known RBP	12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	CCER1	Q8TC90	406 aa	Predicted RBP	12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	ARMC5	Q96C12	935 aa		12.7	□□□□□ -0.38
TRNT1-208	ENST00000434583	ATP5J2-PTCD1	G3V325	749 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	WNT10B	O00744	389 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	ZBTB48	P10074	688 aa	Predicted RBP	12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	RIPK4	P57078	832 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	CCDC152	Q4G0S7	254 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	TMEM106C	Q9BVX2	250 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	CHPF2	Q9P2E5	772 aa		12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	DBF4	Q9UBU7	674 aa	Predicted RBP	12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	KIAA0100	Q14667	2235 aa	Known RBP	12.69	□□□□□ -0.38
TRNT1-208	ENST00000434583	COL1A1	P02452	1464 aa	Predicted RBP	12.68	□□□□□ -0.38
TRNT1-208	ENST00000434583	ZNF646	O15015	1829 aa	Predicted RBP	12.68	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms