RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 KDM3BQ7LBC6 1761 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 H3BM21 787 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
COL17A1-204ENST00000433822 GNAI3P08754 354 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 PTMSP20962 102 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 DDIT3P35638 169 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
COL17A1-204ENST00000433822 SH3BP2P78314 561 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 MCM10Q7L590 875 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 PLEKHM2Q8IWE5 1019 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 HSCBQ8IWL3 235 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 STK31Q9BXU1 1019 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 FAM217BQ9NTX9 383 aaPredicted RBP9.19□□□□□ -0.94
COL17A1-204ENST00000433822 DCCP43146 1447 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 BCL9LQ86UU0 1499 aa9.19□□□□□ -0.94
COL17A1-204ENST00000433822 ELL2O00472 640 aaPredicted RBP9.18□□□□□ -0.94
COL17A1-204ENST00000433822 CCNYL3P0C7X3 344 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 LORP23490 312 aaPredicted RBP9.18□□□□□ -0.94
COL17A1-204ENST00000433822 AOX1Q06278 1338 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 TAF7Q15545 349 aaPredicted RBP9.18□□□□□ -0.94
COL17A1-204ENST00000433822 TTC22Q5TAA0 569 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 BRINP3Q76B58 766 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 DEFB132Q7Z7B7 95 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 ABTB2Q8N961 1025 aa9.18□□□□□ -0.94
COL17A1-204ENST00000433822 TRPM3Q9HCF6 1732 aaPredicted RBP9.18□□□□□ -0.94
COL17A1-204ENST00000433822 TUBGCP6Q96RT7 1819 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 C6orf229H3BNL8 230 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 FDX1P10109 184 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 VEGFBP49765 207 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 AMOTQ4VCS5 1084 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 TBC1D9Q6ZT07 1266 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
COL17A1-204ENST00000433822 CCDC102AQ96A19 550 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 BCL11AQ9H165 835 aa9.17□□□□□ -0.94
COL17A1-204ENST00000433822 ISY1Q9ULR0 285 aaKnown RBP9.17□□□□□ -0.94
COL17A1-204ENST00000433822 ATRNO75882 1429 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 FRAT2O75474 233 aaPredicted RBP9.16□□□□□ -0.94
COL17A1-204ENST00000433822 ADAMTS2O95450 1211 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 GNAI2P04899 355 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 RABEP1Q15276 862 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 CASC1Q6TDU7 716 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 CLEC17AQ6ZS10 378 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 KRI1Q8N9T8 703 aaKnown RBP9.16□□□□□ -0.94
COL17A1-204ENST00000433822 IL17RAQ96F46 866 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 ZFP42Q96MM3 310 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 KIF2CQ99661 725 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 SRCIN1Q9C0H9 1055 aa9.16□□□□□ -0.94
COL17A1-204ENST00000433822 SALL3Q9BXA9 1300 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 GSPT1P15170 499 aaKnown RBP9.15□□□□□ -0.94
COL17A1-204ENST00000433822 FLIIQ13045 1269 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 PTPRNQ16849 979 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 IL17REQ8NFR9 667 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 MEIS3Q99687 375 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 UNC93B1Q9H1C4 597 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 C1orf115Q9H7X2 142 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
COL17A1-204ENST00000433822 ALS2Q96Q42 1657 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 FOXO3O43524 673 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 REC8O95072 547 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 YY1P25490 414 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 MCM4P33991 863 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 ATP8B2P98198 1209 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 KRT24Q2M2I5 525 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 ARHGEF25Q86VW2 580 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 MPNDQ8N594 471 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 PCDHGC3Q9UN70 934 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 HDAC5Q9UQL6 1122 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 GLI3P10071 1580 aa9.14□□□□□ -0.95
COL17A1-204ENST00000433822 SIPA1L3O60292 1781 aaPredicted RBP9.14□□□□□ -0.95
COL17A1-204ENST00000433822 HEG1Q9ULI3 1381 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 ERBB4Q15303 1308 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 K7ELQ4 463 aaPredicted RBP9.13□□□□□ -0.95
COL17A1-204ENST00000433822 RAB11FIP3O75154 756 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 VARSP26640 1264 aaKnown RBP9.13□□□□□ -0.95
COL17A1-204ENST00000433822 PLEKHO1Q53GL0 409 aaPredicted RBP9.13□□□□□ -0.95
COL17A1-204ENST00000433822 BAP1Q92560 729 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 NGLY1Q96IV0 654 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 STAP2Q9UGK3 403 aa9.13□□□□□ -0.95
COL17A1-204ENST00000433822 KCNH2Q12809 1159 aa9.12□□□□□ -0.95
COL17A1-204ENST00000433822 SCARF1Q14162 830 aa9.12□□□□□ -0.95
COL17A1-204ENST00000433822 L1TD1Q5T7N2 865 aaKnown RBP9.12□□□□□ -0.95
COL17A1-204ENST00000433822 C14orf37Q86TY3 774 aa9.12□□□□□ -0.95
COL17A1-204ENST00000433822 USP26Q9BXU7 913 aa9.12□□□□□ -0.95
COL17A1-204ENST00000433822 SLKQ9H2G2 1235 aaPredicted RBP9.12□□□□□ -0.95
COL17A1-204ENST00000433822 USP21Q9UK80 565 aa9.12□□□□□ -0.95
COL17A1-204ENST00000433822 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 PDE1AP54750 535 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 ANAPC15P60006 121 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 EIF4A1P60842 406 aaKnown RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 PSME1Q06323 249 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 NNTQ13423 1086 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 FKBP5Q13451 457 aaPredicted RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 MTX1Q13505 466 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 RAB3GAP1Q15042 981 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 SKOR2Q2VWA4 1001 aaPredicted RBP9.11□□□□□ -0.95
COL17A1-204ENST00000433822 LINC01559Q495D7 138 aa9.11□□□□□ -0.95
COL17A1-204ENST00000433822 HSP90AB4PQ58FF6 505 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms