RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 MIS18AQ9NYP9 233 aa8.04□□□□□ -1.12
CPS1-203ENST00000430249 ARHGEF10O15013 1369 aa8.04□□□□□ -1.12
CPS1-203ENST00000430249 SNW1Q13573 536 aaKnown RBP8.04□□□□□ -1.12
CPS1-203ENST00000430249 IFIT1BQ5T764 474 aaKnown RBP8.04□□□□□ -1.12
CPS1-203ENST00000430249 CCDC174Q6PII3 467 aa8.04□□□□□ -1.12
CPS1-203ENST00000430249 CEP112Q8N8E3 955 aa8.04□□□□□ -1.12
CPS1-203ENST00000430249 MSANTD4Q8NCY6 345 aa8.04□□□□□ -1.12
CPS1-203ENST00000430249 PI4KAP2A4QPH2 592 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 NDC80O14777 642 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TNNT1P13805 278 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 SSFA2P28290 1259 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 SSR1P43307 286 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 SYKP43405 635 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 BMS1Q14692 1282 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 PI4KAP1Q8N8J0 262 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TSNARE1Q96NA8 513 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 NSRP1Q9H0G5 558 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 MAST3O60307 1309 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TSPY3P0CV98 308 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TSPY8P0CW00 308 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 KRT13P13646 458 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 PARP10Q53GL7 1025 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 THUMPD2Q9BTF0 503 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 CLUL1Q15846 466 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TDRD12Q587J7 1177 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 FBXO31Q5XUX0 539 aaPredicted RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 FAM200AQ8TCP9 573 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 IQCDQ96DY2 449 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 F6X3S4 739 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 PSMA7O14818 248 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 IL2RBP14784 551 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TRIM14Q14142 442 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 NBPF6Q5VWK0 638 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 NBPF5PQ86XG9 351 aaPredicted RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 STK11IPQ8N1F8 1099 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 PPM1EQ8WY54 764 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 NBPF4Q96M43 638 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 SLC26A6Q9BXS9 759 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 DCTPP1Q9H773 170 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 USP25Q9UHP3 1055 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 BRPF3Q9ULD4 1205 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 SAMD9Q5K651 1589 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 TOM1O60784 492 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 SETDB2Q96T68 719 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 LLPHQ9BRT6 129 aaKnown RBP8.03□□□□□ -1.12
CPS1-203ENST00000430249 TBX22Q9Y458 520 aa8.03□□□□□ -1.12
CPS1-203ENST00000430249 URI1O94763 535 aaPredicted RBP8.02□□□□□ -1.13
CPS1-203ENST00000430249 XPCQ01831 940 aaPredicted RBP8.02□□□□□ -1.13
CPS1-203ENST00000430249 TMC6Q7Z403 805 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 SMC5Q8IY18 1101 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 USHBP1Q8N6Y0 703 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 RRP36Q96EU6 259 aaKnown RBP8.02□□□□□ -1.13
CPS1-203ENST00000430249 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 NLRP3Q96P20 1036 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 GNA11P29992 359 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 KRT2P35908 639 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 STAT6P42226 847 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 PIP4K2BP78356 416 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 CENPHQ9H3R5 247 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 MAGEB6P1A0A0J9YX57 407 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 ZNF165P49910 485 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 UBE3BQ7Z3V4 1068 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.02□□□□□ -1.13
CPS1-203ENST00000430249 SYCP3Q8IZU3 236 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 HOOK2Q96ED9 719 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 ALG1Q9BT22 464 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 PAG1Q9NWQ8 432 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 KLF18A0A0U1RQI7 1052 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 HSF2BPO75031 334 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 ADCY5O95622 1261 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 F13A1P00488 732 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 NGLY1Q96IV0 654 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 TRIM47Q96LD4 638 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 DENND2AQ9ULE3 1009 aa8.02□□□□□ -1.13
CPS1-203ENST00000430249 OPA1O60313 960 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 SDSP20132 328 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 ZSCAN23Q3MJ62 389 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 C6orf163Q5TEZ5 329 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 FERMT3Q86UX7 667 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 FAM177A1Q8N128 213 aaPredicted RBP8.01□□□□□ -1.13
CPS1-203ENST00000430249 SLC4A4Q9Y6R1 1079 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 KDM5AP29375 1690 aaKnown RBP8.01□□□□□ -1.13
CPS1-203ENST00000430249 C6orf229H3BNL8 230 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 FOXO3O43524 673 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 CTNNA2P26232 953 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 ACTN2P35609 894 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 FAM193AP78312 1265 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 SKIDA1Q1XH10 827 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 CEP135Q66GS9 1140 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 NAA16Q6N069 864 aaPredicted RBP8.01□□□□□ -1.13
CPS1-203ENST00000430249 IP6K1Q92551 441 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPS1-203ENST00000430249 ZBTB3Q9H5J0 574 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 C19orf44Q9H6X5 657 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 RBM8AQ9Y5S9 174 aaKnown RBP8.01□□□□□ -1.13
CPS1-203ENST00000430249 GSTTP1A0A1W2PQM5 241 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 CYP7A1P22680 504 aa8.01□□□□□ -1.13
CPS1-203ENST00000430249 EIF4A2Q14240 407 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms