RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 COPS6Q7L5N1 327 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 TMC4Q7Z404 712 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
CSTF1-203ENST00000428552 ZNF296Q8WUU4 475 aaPredicted RBP10.65□□□□□ -0.7
CSTF1-203ENST00000428552 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.7
CSTF1-203ENST00000428552 EIF2S2P20042 333 aaKnown RBP10.64□□□□□ -0.71
CSTF1-203ENST00000428552 ZNF280AP59817 542 aaPredicted RBP10.64□□□□□ -0.71
CSTF1-203ENST00000428552 SF3B3Q15393 1217 aaKnown RBP10.64□□□□□ -0.71
CSTF1-203ENST00000428552 MOB2Q70IA6 237 aa10.64□□□□□ -0.71
CSTF1-203ENST00000428552 NSFL1CQ9UNZ2 370 aaKnown RBP10.64□□□□□ -0.71
CSTF1-203ENST00000428552 PSME4Q14997 1843 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 TBC1D8O95759 1140 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 ANGEL2Q5VTE6 544 aaKnown RBP10.63□□□□□ -0.71
CSTF1-203ENST00000428552 SULF1Q8IWU6 871 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 TBC1D16Q8TBP0 767 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 GMLQ99445 158 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 R3HDMLQ9H3Y0 253 aa10.63□□□□□ -0.71
CSTF1-203ENST00000428552 ZNF646O15015 1829 aaPredicted RBP10.63□□□□□ -0.71
CSTF1-203ENST00000428552 BRCA2P51587 3418 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 C6orf229H3BNL8 230 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 AIMP1Q12904 312 aaKnown RBP10.62□□□□□ -0.71
CSTF1-203ENST00000428552 SCARF1Q14162 830 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 PKN2Q16513 984 aaKnown RBP10.62□□□□□ -0.71
CSTF1-203ENST00000428552 TPRNQ4KMQ1 711 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 HSP90AB3PQ58FF7 597 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 PPP4R3CPQ6ZMV5 832 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 ERICH6Q7L0X2 663 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 REM2Q8IYK8 340 aaPredicted RBP10.62□□□□□ -0.71
CSTF1-203ENST00000428552 NECTIN2Q92692 538 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 FAM89AQ96GI7 184 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 ISCA1Q9BUE6 129 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 TSPYL4Q9UJ04 414 aa10.62□□□□□ -0.71
CSTF1-203ENST00000428552 SCAF8Q9UPN6 1271 aaKnown RBP10.62□□□□□ -0.71
CSTF1-203ENST00000428552 GPR25O00155 361 aa10.61□□□□□ -0.71
CSTF1-203ENST00000428552 TM4SF4P48230 202 aa10.61□□□□□ -0.71
CSTF1-203ENST00000428552 FKBP1BP68106 108 aa10.61□□□□□ -0.71
CSTF1-203ENST00000428552 KRT24Q2M2I5 525 aa10.61□□□□□ -0.71
CSTF1-203ENST00000428552 NOM1Q5C9Z4 860 aaKnown RBP10.61□□□□□ -0.71
CSTF1-203ENST00000428552 HABP4Q5JVS0 413 aaKnown RBP10.61□□□□□ -0.71
CSTF1-203ENST00000428552 PODXL2Q9NZ53 605 aa10.61□□□□□ -0.71
CSTF1-203ENST00000428552 UBE2Q2LH0YL09 131 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 PRAMEF18Q5VWM3 479 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 RSBN1LQ6PCB5 846 aaPredicted RBP10.6□□□□□ -0.71
CSTF1-203ENST00000428552 FBXO46Q6PJ61 603 aaPredicted RBP10.6□□□□□ -0.71
CSTF1-203ENST00000428552 HOMEZQ8IX15 550 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 EYA3Q99504 573 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 CFHR5Q9BXR6 569 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 CENPFP49454 3210 aa10.6□□□□□ -0.71
CSTF1-203ENST00000428552 PITPNM2Q9BZ72 1349 aa10.59□□□□□ -0.71
CSTF1-203ENST00000428552 RPS8P62241 208 aaKnown RBP10.59□□□□□ -0.71
CSTF1-203ENST00000428552 AGBL3Q8NEM8 1001 aa10.59□□□□□ -0.71
CSTF1-203ENST00000428552 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
CSTF1-203ENST00000428552 SEC31BQ9NQW1 1179 aa10.59□□□□□ -0.71
CSTF1-203ENST00000428552 HDAC9Q9UKV0 1011 aa10.59□□□□□ -0.71
CSTF1-203ENST00000428552 POTEFA5A3E0 1075 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 WTIPA6NIX2 430 aaPredicted RBP10.58□□□□□ -0.72
CSTF1-203ENST00000428552 ATP5J2-PTCD1G3V325 749 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 PLBD2Q8NHP8 589 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 MYOZ2Q9NPC6 264 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 BABAM1Q9NWV8 329 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 CHPF2Q9P2E5 772 aa10.58□□□□□ -0.72
CSTF1-203ENST00000428552 RBBP6Q7Z6E9 1792 aaKnown RBP10.57□□□□□ -0.72
CSTF1-203ENST00000428552 TULP1O00294 542 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-203ENST00000428552 UFL1O94874 794 aa10.57□□□□□ -0.72
CSTF1-203ENST00000428552 USP17L8P0C7I0 530 aa10.57□□□□□ -0.72
CSTF1-203ENST00000428552 NBPF9Q3BBW0 867 aa10.57□□□□□ -0.72
CSTF1-203ENST00000428552 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
CSTF1-203ENST00000428552 GCC1Q96CN9 775 aa10.57□□□□□ -0.72
CSTF1-203ENST00000428552 ZC3H12CQ9C0D7 883 aaKnown RBP10.57□□□□□ -0.72
CSTF1-203ENST00000428552 IRS4O14654 1257 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-203ENST00000428552 FKTNO75072 461 aa10.56□□□□□ -0.72
CSTF1-203ENST00000428552 NEFMP07197 916 aa10.56□□□□□ -0.72
CSTF1-203ENST00000428552 FXR1P51114 621 aaKnown RBP eCLIP10.56□□□□□ -0.72
CSTF1-203ENST00000428552 MKRN3Q13064 507 aaKnown RBP10.56□□□□□ -0.72
CSTF1-203ENST00000428552 TRIM28Q13263 835 aaKnown RBP10.56□□□□□ -0.72
CSTF1-203ENST00000428552 ANKRD13DQ6ZTN6 518 aa10.56□□□□□ -0.72
CSTF1-203ENST00000428552 MXD3Q9BW11 206 aa10.56□□□□□ -0.72
CSTF1-203ENST00000428552 LAMB1P07942 1786 aa10.56□□□□□ -0.72
CSTF1-203ENST00000428552 SZT2Q5T011 3432 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 CHL1O00533 1208 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 RIPK4P57078 832 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 CAP1Q01518 475 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 PTPN12Q05209 780 aaKnown RBP10.55□□□□□ -0.72
CSTF1-203ENST00000428552 GGA1Q9UJY5 639 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 MAPK8IP3Q9UPT6 1336 aa10.55□□□□□ -0.72
CSTF1-203ENST00000428552 USP17L3A6NCW0 530 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 USP17L4A6NCW7 530 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 WNT10BO00744 389 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 TMPOP42166 694 aaKnown RBP10.54□□□□□ -0.72
CSTF1-203ENST00000428552 DACT2Q5SW24 774 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 LDLRAD1Q5T700 205 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 OTOP1Q7RTM1 612 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 USP17L1Q7RTZ2 530 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 ANKIB1Q9P2G1 1089 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
CSTF1-203ENST00000428552 SSC5DA1L4H1 1573 aa10.53□□□□□ -0.72
CSTF1-203ENST00000428552 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
CSTF1-203ENST00000428552 SREBF2Q12772 1141 aa10.53□□□□□ -0.72
CSTF1-203ENST00000428552 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
CSTF1-203ENST00000428552 SPRYD7Q5W111 196 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms