RNA–Protein interactions for RNA: ENST00000428240.1

ITSN1-216, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 213 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-216ENST00000428240 ANGEL2Q5VTE6 544 aaKnown RBP10.76□□□□□ -0.69
ITSN1-216ENST00000428240 MOB2Q70IA6 237 aa10.76□□□□□ -0.69
ITSN1-216ENST00000428240 FAM89AQ96GI7 184 aa10.76□□□□□ -0.69
ITSN1-216ENST00000428240 HDAC9Q9UKV0 1011 aa10.76□□□□□ -0.69
ITSN1-216ENST00000428240 SCAF8Q9UPN6 1271 aaKnown RBP10.76□□□□□ -0.69
ITSN1-216ENST00000428240 SCARF1Q14162 830 aa10.75□□□□□ -0.69
ITSN1-216ENST00000428240 PKN2Q16513 984 aaKnown RBP10.75□□□□□ -0.69
ITSN1-216ENST00000428240 TBC1D16Q8TBP0 767 aa10.75□□□□□ -0.69
ITSN1-216ENST00000428240 MKI67P46013 3256 aaKnown RBP10.75□□□□□ -0.69
ITSN1-216ENST00000428240 SF3B3Q15393 1217 aaKnown RBP10.74□□□□□ -0.69
ITSN1-216ENST00000428240 KRT24Q2M2I5 525 aa10.74□□□□□ -0.69
ITSN1-216ENST00000428240 RTL5Q5HYW3 569 aaPredicted RBP10.74□□□□□ -0.69
ITSN1-216ENST00000428240 REM2Q8IYK8 340 aaPredicted RBP10.74□□□□□ -0.69
ITSN1-216ENST00000428240 EYA3Q99504 573 aa10.74□□□□□ -0.69
ITSN1-216ENST00000428240 AKAP11Q9UKA4 1901 aa10.74□□□□□ -0.69
ITSN1-216ENST00000428240 POLR2AP24928 1970 aaKnown RBP10.74□□□□□ -0.69
ITSN1-216ENST00000428240 DDX60Q8IY21 1712 aaKnown RBP10.73□□□□□ -0.69
ITSN1-216ENST00000428240 ATP5J2-PTCD1G3V325 749 aa10.73□□□□□ -0.69
ITSN1-216ENST00000428240 UBE2Q2LH0YL09 131 aa10.73□□□□□ -0.69
ITSN1-216ENST00000428240 ZNF280AP59817 542 aaPredicted RBP10.73□□□□□ -0.69
ITSN1-216ENST00000428240 FKBP1BP68106 108 aa10.73□□□□□ -0.69
ITSN1-216ENST00000428240 PRAMEF18Q5VWM3 479 aa10.73□□□□□ -0.69
ITSN1-216ENST00000428240 ZC3H12CQ9C0D7 883 aaKnown RBP10.73□□□□□ -0.69
ITSN1-216ENST00000428240 GPR25O00155 361 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 RPS8P62241 208 aaKnown RBP10.72□□□□□ -0.69
ITSN1-216ENST00000428240 MKRN3Q13064 507 aaKnown RBP10.72□□□□□ -0.69
ITSN1-216ENST00000428240 RSBN1LQ6PCB5 846 aaPredicted RBP10.72□□□□□ -0.69
ITSN1-216ENST00000428240 ISCA1Q9BUE6 129 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 R3HDMLQ9H3Y0 253 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 PODXL2Q9NZ53 605 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 CHPF2Q9P2E5 772 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 MAPK8IP3Q9UPT6 1336 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 BRCA2P51587 3418 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 PAPPA2Q9BXP8 1791 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 SCN9AQ15858 1988 aa10.72□□□□□ -0.69
ITSN1-216ENST00000428240 TM4SF4P48230 202 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 RIPK4P57078 832 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 HABP4Q5JVS0 413 aaKnown RBP10.71□□□□□ -0.69
ITSN1-216ENST00000428240 FBXO46Q6PJ61 603 aaPredicted RBP10.71□□□□□ -0.69
ITSN1-216ENST00000428240 AGBL3Q8NEM8 1001 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 PLBD2Q8NHP8 589 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 GMLQ99445 158 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 MYOZ2Q9NPC6 264 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 SEC31BQ9NQW1 1179 aa10.71□□□□□ -0.69
ITSN1-216ENST00000428240 HTTP42858 3142 aa10.71□□□□□ -0.7
ITSN1-216ENST00000428240 ZNF609O15014 1411 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 PITPNM2Q9BZ72 1349 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 G3V3G9 751 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 UFL1O94874 794 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 USP17L8P0C7I0 530 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 NBPF9Q3BBW0 867 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 NOM1Q5C9Z4 860 aaKnown RBP10.7□□□□□ -0.7
ITSN1-216ENST00000428240 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 ANKRD13DQ6ZTN6 518 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 GCC1Q96CN9 775 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 BABAM1Q9NWV8 329 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 ANKIB1Q9P2G1 1089 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 CENPFP49454 3210 aa10.7□□□□□ -0.7
ITSN1-216ENST00000428240 WTIPA6NIX2 430 aaPredicted RBP10.69□□□□□ -0.7
ITSN1-216ENST00000428240 IRS4O14654 1257 aaPredicted RBP10.69□□□□□ -0.7
ITSN1-216ENST00000428240 GGA1Q9UJY5 639 aa10.69□□□□□ -0.7
ITSN1-216ENST00000428240 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
ITSN1-216ENST00000428240 FKTNO75072 461 aa10.68□□□□□ -0.7
ITSN1-216ENST00000428240 TTLL12Q14166 644 aaPredicted RBP10.68□□□□□ -0.7
ITSN1-216ENST00000428240 MXD3Q9BW11 206 aa10.68□□□□□ -0.7
ITSN1-216ENST00000428240 CFHR5Q9BXR6 569 aa10.68□□□□□ -0.7
ITSN1-216ENST00000428240 PNNQ9H307 717 aaKnown RBP10.68□□□□□ -0.7
ITSN1-216ENST00000428240 USP17L3A6NCW0 530 aa10.67□□□□□ -0.7
ITSN1-216ENST00000428240 USP17L4A6NCW7 530 aa10.67□□□□□ -0.7
ITSN1-216ENST00000428240 TMPOP42166 694 aaKnown RBP10.67□□□□□ -0.7
ITSN1-216ENST00000428240 PTPN12Q05209 780 aaKnown RBP10.67□□□□□ -0.7
ITSN1-216ENST00000428240 PRKG1Q13976 671 aa10.67□□□□□ -0.7
ITSN1-216ENST00000428240 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
ITSN1-216ENST00000428240 USP17L1Q7RTZ2 530 aa10.67□□□□□ -0.7
ITSN1-216ENST00000428240 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
ITSN1-216ENST00000428240 CHL1O00533 1208 aa10.66□□□□□ -0.7
ITSN1-216ENST00000428240 WNT10BO00744 389 aa10.66□□□□□ -0.7
ITSN1-216ENST00000428240 SREBF2Q12772 1141 aa10.66□□□□□ -0.7
ITSN1-216ENST00000428240 TRIM28Q13263 835 aaKnown RBP10.66□□□□□ -0.7
ITSN1-216ENST00000428240 PODNQ7Z5L7 613 aa10.66□□□□□ -0.7
ITSN1-216ENST00000428240 ZBTB38Q8NAP3 1195 aaPredicted RBP10.66□□□□□ -0.7
ITSN1-216ENST00000428240 JARID2Q92833 1246 aaPredicted RBP10.66□□□□□ -0.7
ITSN1-216ENST00000428240 DBF4Q9UBU7 674 aaPredicted RBP10.66□□□□□ -0.7
ITSN1-216ENST00000428240 FZD1Q9UP38 647 aa10.66□□□□□ -0.7
ITSN1-216ENST00000428240 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
ITSN1-216ENST00000428240 XDHP47989 1333 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 SASH1O94885 1247 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 NEUROD2Q15784 382 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 SPRYD7Q5W111 196 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 OTOP1Q7RTM1 612 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 TRIM17Q9Y577 477 aa10.65□□□□□ -0.7
ITSN1-216ENST00000428240 ATP2B4P23634 1241 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 NF2P35240 595 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
ITSN1-216ENST00000428240 LMOD3Q0VAK6 560 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 CCDC152Q4G0S7 254 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 DACT2Q5SW24 774 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 LDLRAD1Q5T700 205 aa10.64□□□□□ -0.71
ITSN1-216ENST00000428240 PSME4Q14997 1843 aa10.63□□□□□ -0.71
ITSN1-216ENST00000428240 INTS3Q68E01 1043 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms