RNA–Protein interactions for RNA: ENST00000428012.1

KDM5C-206, Transcript of lysine demethylase 5C, humanhuman

TSL 3

Gene KDM5C, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-206ENST00000428012 GGA3Q9NZ52 723 aa18.5■□□□□ 0.55
KDM5C-206ENST00000428012 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
KDM5C-206ENST00000428012 ATP5J2-PTCD1G3V325 749 aa18.49■□□□□ 0.55
KDM5C-206ENST00000428012 VIL1P09327 827 aaKnown RBP18.49■□□□□ 0.55
KDM5C-206ENST00000428012 RPS12P25398 132 aaKnown RBP18.49■□□□□ 0.55
KDM5C-206ENST00000428012 TMPOP42166 694 aaKnown RBP18.49■□□□□ 0.55
KDM5C-206ENST00000428012 RTL5Q5HYW3 569 aaPredicted RBP18.49■□□□□ 0.55
KDM5C-206ENST00000428012 TBC1D16Q8TBP0 767 aa18.49■□□□□ 0.55
KDM5C-206ENST00000428012 CDCA5Q96FF9 252 aa18.48■□□□□ 0.55
KDM5C-206ENST00000428012 CHL1O00533 1208 aa18.47■□□□□ 0.55
KDM5C-206ENST00000428012 RASAL3Q86YV0 1011 aa18.47■□□□□ 0.55
KDM5C-206ENST00000428012 PLBD2Q8NHP8 589 aa18.47■□□□□ 0.55
KDM5C-206ENST00000428012 PNNQ9H307 717 aaKnown RBP18.46■□□□□ 0.55
KDM5C-206ENST00000428012 SEC31BQ9NQW1 1179 aa18.46■□□□□ 0.55
KDM5C-206ENST00000428012 SCAF8Q9UPN6 1271 aaKnown RBP18.46■□□□□ 0.55
KDM5C-206ENST00000428012 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
KDM5C-206ENST00000428012 ANKRD13DQ6ZTN6 518 aa18.45■□□□□ 0.54
KDM5C-206ENST00000428012 MOB2Q70IA6 237 aa18.45■□□□□ 0.54
KDM5C-206ENST00000428012 CTU1Q7Z7A3 348 aaKnown RBP18.45■□□□□ 0.54
KDM5C-206ENST00000428012 SULF1Q8IWU6 871 aa18.45■□□□□ 0.54
KDM5C-206ENST00000428012 IRS4O14654 1257 aaPredicted RBP18.44■□□□□ 0.54
KDM5C-206ENST00000428012 ZNF280AP59817 542 aaPredicted RBP18.44■□□□□ 0.54
KDM5C-206ENST00000428012 SCARF1Q14162 830 aa18.44■□□□□ 0.54
KDM5C-206ENST00000428012 ANGEL2Q5VTE6 544 aaKnown RBP18.44■□□□□ 0.54
KDM5C-206ENST00000428012 EYA3Q99504 573 aa18.44■□□□□ 0.54
KDM5C-206ENST00000428012 PODXL2Q9NZ53 605 aa18.44■□□□□ 0.54
KDM5C-206ENST00000428012 GMLQ99445 158 aa18.43■□□□□ 0.54
KDM5C-206ENST00000428012 TRIM35Q9UPQ4 493 aa18.43■□□□□ 0.54
KDM5C-206ENST00000428012 HPS5Q9UPZ3 1129 aa18.43■□□□□ 0.54
KDM5C-206ENST00000428012 PSME4Q14997 1843 aa18.43■□□□□ 0.54
KDM5C-206ENST00000428012 WTIPA6NIX2 430 aaPredicted RBP18.42■□□□□ 0.54
KDM5C-206ENST00000428012 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
KDM5C-206ENST00000428012 HDGFL1Q5TGJ6 251 aa18.42■□□□□ 0.54
KDM5C-206ENST00000428012 ZC3H12CQ9C0D7 883 aaKnown RBP18.42■□□□□ 0.54
KDM5C-206ENST00000428012 LAS1LQ9Y4W2 734 aaKnown RBP18.42■□□□□ 0.54
KDM5C-206ENST00000428012 MKI67P46013 3256 aaKnown RBP18.41■□□□□ 0.54
KDM5C-206ENST00000428012 UFL1O94874 794 aa18.41■□□□□ 0.54
KDM5C-206ENST00000428012 TRIM28Q13263 835 aaKnown RBP18.41■□□□□ 0.54
KDM5C-206ENST00000428012 PRAMEF18Q5VWM3 479 aa18.41■□□□□ 0.54
KDM5C-206ENST00000428012 RSBN1LQ6PCB5 846 aaPredicted RBP18.41■□□□□ 0.54
KDM5C-206ENST00000428012 CCDC146Q8IYE0 955 aa18.41■□□□□ 0.54
KDM5C-206ENST00000428012 ZNF609O15014 1411 aa18.4■□□□□ 0.54
KDM5C-206ENST00000428012 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
KDM5C-206ENST00000428012 TBC1D8O95759 1140 aa18.4■□□□□ 0.54
KDM5C-206ENST00000428012 PRPF38BQ5VTL8 546 aaKnown RBP18.4■□□□□ 0.54
KDM5C-206ENST00000428012 JARID2Q92833 1246 aaPredicted RBP18.4■□□□□ 0.54
KDM5C-206ENST00000428012 UBE2Q2LH0YL09 131 aa18.39■□□□□ 0.53
KDM5C-206ENST00000428012 LMOD3Q0VAK6 560 aa18.39■□□□□ 0.53
KDM5C-206ENST00000428012 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
KDM5C-206ENST00000428012 ZNF296Q8WUU4 475 aaPredicted RBP18.39■□□□□ 0.53
KDM5C-206ENST00000428012 DBF4Q9UBU7 674 aaPredicted RBP18.39■□□□□ 0.53
KDM5C-206ENST00000428012 GGA1Q9UJY5 639 aa18.39■□□□□ 0.53
KDM5C-206ENST00000428012 ZBTB38Q8NAP3 1195 aaPredicted RBP18.38■□□□□ 0.53
KDM5C-206ENST00000428012 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
KDM5C-206ENST00000428012 MYOZ2Q9NPC6 264 aa18.38■□□□□ 0.53
KDM5C-206ENST00000428012 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
KDM5C-206ENST00000428012 HTTP42858 3142 aa18.38■□□□□ 0.53
KDM5C-206ENST00000428012 ZNF646O15015 1829 aaPredicted RBP18.37■□□□□ 0.53
KDM5C-206ENST00000428012 DUSP27Q5VZP5 1158 aa18.37■□□□□ 0.53
KDM5C-206ENST00000428012 MXD3Q9BW11 206 aa18.37■□□□□ 0.53
KDM5C-206ENST00000428012 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
KDM5C-206ENST00000428012 PHAXQ9H814 394 aaKnown RBP18.37■□□□□ 0.53
KDM5C-206ENST00000428012 HOXB7P09629 217 aa18.36■□□□□ 0.53
KDM5C-206ENST00000428012 USP17L8P0C7I0 530 aa18.36■□□□□ 0.53
KDM5C-206ENST00000428012 FKBP1BP68106 108 aa18.36■□□□□ 0.53
KDM5C-206ENST00000428012 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
KDM5C-206ENST00000428012 REM2Q8IYK8 340 aaPredicted RBP18.36■□□□□ 0.53
KDM5C-206ENST00000428012 HYPKQ9NX55 129 aa18.36■□□□□ 0.53
KDM5C-206ENST00000428012 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
KDM5C-206ENST00000428012 G3V3G9 751 aa18.35■□□□□ 0.53
KDM5C-206ENST00000428012 DCAF8Q5TAQ9 597 aa18.35■□□□□ 0.53
KDM5C-206ENST00000428012 CENPFP49454 3210 aa18.34■□□□□ 0.53
KDM5C-206ENST00000428012 USP17L3A6NCW0 530 aa18.34■□□□□ 0.53
KDM5C-206ENST00000428012 USP17L4A6NCW7 530 aa18.34■□□□□ 0.53
KDM5C-206ENST00000428012 TM4SF4P48230 202 aa18.34■□□□□ 0.53
KDM5C-206ENST00000428012 MKRN3Q13064 507 aaKnown RBP18.34■□□□□ 0.53
KDM5C-206ENST00000428012 USP17L1Q7RTZ2 530 aa18.34■□□□□ 0.53
KDM5C-206ENST00000428012 GPR25O00155 361 aa18.33■□□□□ 0.52
KDM5C-206ENST00000428012 RIC3Q7Z5B4 369 aa18.33■□□□□ 0.52
KDM5C-206ENST00000428012 MYD88Q99836 296 aa18.33■□□□□ 0.52
KDM5C-206ENST00000428012 MBIPQ9NS73 344 aa18.33■□□□□ 0.52
KDM5C-206ENST00000428012 HDAC9Q9UKV0 1011 aa18.33■□□□□ 0.52
KDM5C-206ENST00000428012 XDHP47989 1333 aa18.32■□□□□ 0.52
KDM5C-206ENST00000428012 PDE8AO60658 829 aa18.32■□□□□ 0.52
KDM5C-206ENST00000428012 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
KDM5C-206ENST00000428012 PKN2Q16513 984 aaKnown RBP18.32■□□□□ 0.52
KDM5C-206ENST00000428012 CCDC152Q4G0S7 254 aa18.32■□□□□ 0.52
KDM5C-206ENST00000428012 BRCA2P51587 3418 aa18.32■□□□□ 0.52
KDM5C-206ENST00000428012 DACT2Q5SW24 774 aa18.31■□□□□ 0.52
KDM5C-206ENST00000428012 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
KDM5C-206ENST00000428012 RUNDC1Q96C34 613 aa18.31■□□□□ 0.52
KDM5C-206ENST00000428012 WNT10BO00744 389 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 ATP2B4P23634 1241 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
KDM5C-206ENST00000428012 TXNRD3Q86VQ6 643 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 CCDC191Q8NCU4 936 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 SPEF2Q9C093 1822 aa18.3■□□□□ 0.52
KDM5C-206ENST00000428012 ELL2O00472 640 aaPredicted RBP18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms