RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 CDCA5Q96FF9 252 aa11.36□□□□□ -0.59
VNN3-208ENST00000427187 CSRNP1Q96S65 589 aa11.36□□□□□ -0.59
VNN3-208ENST00000427187 SAGE1Q9NXZ1 904 aa11.36□□□□□ -0.59
VNN3-208ENST00000427187 LAS1LQ9Y4W2 734 aaKnown RBP11.36□□□□□ -0.59
VNN3-208ENST00000427187 TMC4Q7Z404 712 aa11.35□□□□□ -0.59
VNN3-208ENST00000427187 SULF1Q8IWU6 871 aa11.35□□□□□ -0.59
VNN3-208ENST00000427187 TBC1D16Q8TBP0 767 aa11.35□□□□□ -0.59
VNN3-208ENST00000427187 RPS12P25398 132 aaKnown RBP11.34□□□□□ -0.59
VNN3-208ENST00000427187 TMPOP42166 694 aaKnown RBP11.34□□□□□ -0.59
VNN3-208ENST00000427187 ANGEL2Q5VTE6 544 aaKnown RBP11.34□□□□□ -0.59
VNN3-208ENST00000427187 MOB2Q70IA6 237 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 RASAL3Q86YV0 1011 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 CCDC146Q8IYE0 955 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 PLBD2Q8NHP8 589 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 ISCA1Q9BUE6 129 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 PNNQ9H307 717 aaKnown RBP11.34□□□□□ -0.59
VNN3-208ENST00000427187 SEC31BQ9NQW1 1179 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 PCDH10Q9P2E7 1040 aa11.34□□□□□ -0.59
VNN3-208ENST00000427187 IRS4O14654 1257 aaPredicted RBP11.33□□□□□ -0.6
VNN3-208ENST00000427187 UFL1O94874 794 aa11.33□□□□□ -0.6
VNN3-208ENST00000427187 SCARF1Q14162 830 aa11.33□□□□□ -0.6
VNN3-208ENST00000427187 SF3B3Q15393 1217 aaKnown RBP11.33□□□□□ -0.6
VNN3-208ENST00000427187 HDGFL1Q5TGJ6 251 aa11.33□□□□□ -0.6
VNN3-208ENST00000427187 CTU1Q7Z7A3 348 aaKnown RBP11.33□□□□□ -0.6
VNN3-208ENST00000427187 CCDC85AQ96PX6 553 aaPredicted RBP11.33□□□□□ -0.6
VNN3-208ENST00000427187 EYA3Q99504 573 aa11.33□□□□□ -0.6
VNN3-208ENST00000427187 G3V3G9 751 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 VIL1P09327 827 aaKnown RBP11.32□□□□□ -0.6
VNN3-208ENST00000427187 RPS8P62241 208 aaKnown RBP11.32□□□□□ -0.6
VNN3-208ENST00000427187 DCAF8Q5TAQ9 597 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 PRAMEF18Q5VWM3 479 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 ANKRD13DQ6ZTN6 518 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
VNN3-208ENST00000427187 ZC3H12CQ9C0D7 883 aaKnown RBP11.32□□□□□ -0.6
VNN3-208ENST00000427187 ANKIB1Q9P2G1 1089 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 HPS5Q9UPZ3 1129 aa11.32□□□□□ -0.6
VNN3-208ENST00000427187 CHL1O00533 1208 aa11.31□□□□□ -0.6
VNN3-208ENST00000427187 TBC1D8O95759 1140 aa11.31□□□□□ -0.6
VNN3-208ENST00000427187 MKRN3Q13064 507 aaKnown RBP11.31□□□□□ -0.6
VNN3-208ENST00000427187 BABAM1Q9NWV8 329 aa11.31□□□□□ -0.6
VNN3-208ENST00000427187 PAPPA2Q9BXP8 1791 aa11.31□□□□□ -0.6
VNN3-208ENST00000427187 PSME4Q14997 1843 aa11.3□□□□□ -0.6
VNN3-208ENST00000427187 WTIPA6NIX2 430 aaPredicted RBP11.3□□□□□ -0.6
VNN3-208ENST00000427187 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
VNN3-208ENST00000427187 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
VNN3-208ENST00000427187 RSBN1LQ6PCB5 846 aaPredicted RBP11.3□□□□□ -0.6
VNN3-208ENST00000427187 ZNF296Q8WUU4 475 aaPredicted RBP11.3□□□□□ -0.6
VNN3-208ENST00000427187 MXD3Q9BW11 206 aa11.3□□□□□ -0.6
VNN3-208ENST00000427187 GGA1Q9UJY5 639 aa11.3□□□□□ -0.6
VNN3-208ENST00000427187 ZNF280AP59817 542 aaPredicted RBP11.29□□□□□ -0.6
VNN3-208ENST00000427187 PRPF38BQ5VTL8 546 aaKnown RBP11.29□□□□□ -0.6
VNN3-208ENST00000427187 PHAXQ9H814 394 aaKnown RBP11.29□□□□□ -0.6
VNN3-208ENST00000427187 MYOZ2Q9NPC6 264 aa11.29□□□□□ -0.6
VNN3-208ENST00000427187 PODXL2Q9NZ53 605 aa11.29□□□□□ -0.6
VNN3-208ENST00000427187 DBF4Q9UBU7 674 aaPredicted RBP11.29□□□□□ -0.6
VNN3-208ENST00000427187 HDAC9Q9UKV0 1011 aa11.29□□□□□ -0.6
VNN3-208ENST00000427187 TRIM35Q9UPQ4 493 aa11.29□□□□□ -0.6
VNN3-208ENST00000427187 SPEF2Q9C093 1822 aa11.29□□□□□ -0.6
VNN3-208ENST00000427187 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 TTLL12Q14166 644 aaPredicted RBP11.28□□□□□ -0.6
VNN3-208ENST00000427187 NBPF9Q3BBW0 867 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 DUSP27Q5VZP5 1158 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 RIC3Q7Z5B4 369 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 MYD88Q99836 296 aa11.28□□□□□ -0.6
VNN3-208ENST00000427187 PRKG1Q13976 671 aa11.27□□□□□ -0.61
VNN3-208ENST00000427187 ZBTB38Q8NAP3 1195 aaPredicted RBP11.27□□□□□ -0.61
VNN3-208ENST00000427187 FBXW7Q969H0 707 aa11.27□□□□□ -0.61
VNN3-208ENST00000427187 GMLQ99445 158 aa11.27□□□□□ -0.61
VNN3-208ENST00000427187 HYPKQ9NX55 129 aa11.27□□□□□ -0.61
VNN3-208ENST00000427187 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.27□□□□□ -0.61
VNN3-208ENST00000427187 ZNF646O15015 1829 aaPredicted RBP11.26□□□□□ -0.61
VNN3-208ENST00000427187 USP17L3A6NCW0 530 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 USP17L4A6NCW7 530 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 ELL2O00472 640 aaPredicted RBP11.26□□□□□ -0.61
VNN3-208ENST00000427187 FKBP1BP68106 108 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 GOLGA2Q08379 1002 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 TRIM28Q13263 835 aaKnown RBP11.26□□□□□ -0.61
VNN3-208ENST00000427187 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 USP17L1Q7RTZ2 530 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 R3HDMLQ9H3Y0 253 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 MBIPQ9NS73 344 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 FZD1Q9UP38 647 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 XDHP47989 1333 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 ZNF609O15014 1411 aa11.26□□□□□ -0.61
VNN3-208ENST00000427187 MKI67P46013 3256 aaKnown RBP11.26□□□□□ -0.61
VNN3-208ENST00000427187 GPR25O00155 361 aa11.25□□□□□ -0.61
VNN3-208ENST00000427187 SASH1O94885 1247 aa11.25□□□□□ -0.61
VNN3-208ENST00000427187 HOXB7P09629 217 aa11.25□□□□□ -0.61
VNN3-208ENST00000427187 ANKRD18AQ8IVF6 992 aa11.25□□□□□ -0.61
VNN3-208ENST00000427187 REM2Q8IYK8 340 aaPredicted RBP11.25□□□□□ -0.61
VNN3-208ENST00000427187 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
VNN3-208ENST00000427187 CENPFP49454 3210 aa11.24□□□□□ -0.61
VNN3-208ENST00000427187 BRCA2P51587 3418 aa11.24□□□□□ -0.61
VNN3-208ENST00000427187 PDE8AO60658 829 aa11.24□□□□□ -0.61
VNN3-208ENST00000427187 PCCAP05165 728 aaPredicted RBP11.24□□□□□ -0.61
VNN3-208ENST00000427187 RUNDC1Q96C34 613 aa11.24□□□□□ -0.61
VNN3-208ENST00000427187 HTTP42858 3142 aa11.24□□□□□ -0.61
VNN3-208ENST00000427187 WNT10BO00744 389 aa11.23□□□□□ -0.61
VNN3-208ENST00000427187 ATP2B4P23634 1241 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms