RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 SPEF2Q9C093 1822 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 SCN9AQ15858 1988 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 RTL9Q8NET4 1388 aa13.2□□□□□ -0.3
HDLBP-213ENST00000427007 EGFRP00533 1210 aa13.19□□□□□ -0.3
HDLBP-213ENST00000427007 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
HDLBP-213ENST00000427007 USP48Q86UV5 1035 aa13.19□□□□□ -0.3
HDLBP-213ENST00000427007 TSPYL6Q8N831 410 aa13.19□□□□□ -0.3
HDLBP-213ENST00000427007 BEGAINQ9BUH8 593 aa13.19□□□□□ -0.3
HDLBP-213ENST00000427007 TSKSQ9UJT2 592 aa13.19□□□□□ -0.3
HDLBP-213ENST00000427007 PDE8AO60658 829 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 UFL1O94874 794 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 PCCAP05165 728 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-213ENST00000427007 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 CCDC191Q8NCU4 936 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 DPF2Q92785 391 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 TSR2Q969E8 191 aaKnown RBP13.18□□□□□ -0.3
HDLBP-213ENST00000427007 ZC3H12CQ9C0D7 883 aaKnown RBP13.18□□□□□ -0.3
HDLBP-213ENST00000427007 CWC25Q9NXE8 425 aaPredicted RBP13.18□□□□□ -0.3
HDLBP-213ENST00000427007 ANKIB1Q9P2G1 1089 aa13.18□□□□□ -0.3
HDLBP-213ENST00000427007 G3V3G9 751 aa13.17□□□□□ -0.3
HDLBP-213ENST00000427007 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
HDLBP-213ENST00000427007 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
HDLBP-213ENST00000427007 DCAF8Q5TAQ9 597 aa13.17□□□□□ -0.3
HDLBP-213ENST00000427007 METTL22Q9BUU2 404 aaPredicted RBP13.17□□□□□ -0.3
HDLBP-213ENST00000427007 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
HDLBP-213ENST00000427007 MAP3K2Q9Y2U5 619 aa13.17□□□□□ -0.3
HDLBP-213ENST00000427007 POLR2AP24928 1970 aaKnown RBP13.17□□□□□ -0.3
HDLBP-213ENST00000427007 PSME4Q14997 1843 aa13.16□□□□□ -0.3
HDLBP-213ENST00000427007 MYH3P11055 1940 aa13.16□□□□□ -0.3
HDLBP-213ENST00000427007 HSP90B1P14625 803 aaKnown RBP13.16□□□□□ -0.3
HDLBP-213ENST00000427007 RPS12P25398 132 aaKnown RBP13.16□□□□□ -0.3
HDLBP-213ENST00000427007 MAP2K2P36507 400 aa13.16□□□□□ -0.3
HDLBP-213ENST00000427007 GGA1Q9UJY5 639 aa13.16□□□□□ -0.3
HDLBP-213ENST00000427007 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 KIF4BQ2VIQ3 1234 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
HDLBP-213ENST00000427007 HHIPL1Q96JK4 782 aa13.15□□□□□ -0.3
HDLBP-213ENST00000427007 IGKV5-2P06315 115 aa13.14□□□□□ -0.31
HDLBP-213ENST00000427007 VIL1P09327 827 aaKnown RBP13.14□□□□□ -0.31
HDLBP-213ENST00000427007 HUNKP57058 714 aa13.14□□□□□ -0.31
HDLBP-213ENST00000427007 KSR2Q6VAB6 950 aa13.14□□□□□ -0.31
HDLBP-213ENST00000427007 ABHD8Q96I13 439 aa13.14□□□□□ -0.31
HDLBP-213ENST00000427007 STK31Q9BXU1 1019 aa13.14□□□□□ -0.31
HDLBP-213ENST00000427007 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-213ENST00000427007 XDHP47989 1333 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 WTIPA6NIX2 430 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-213ENST00000427007 BRPF1P55201 1214 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-213ENST00000427007 CTSWP56202 376 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 CWF19L2Q2TBE0 894 aaKnown RBP13.13□□□□□ -0.31
HDLBP-213ENST00000427007 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
HDLBP-213ENST00000427007 G2E3Q7L622 706 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 ZIC5Q96T25 663 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 CHMP4AQ9BY43 222 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
HDLBP-213ENST00000427007 NEXNQ0ZGT2 675 aa13.12□□□□□ -0.31
HDLBP-213ENST00000427007 RSBN1LQ6PCB5 846 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-213ENST00000427007 WWC1Q8IX03 1113 aa13.12□□□□□ -0.31
HDLBP-213ENST00000427007 CDC5LQ99459 802 aaKnown RBP13.12□□□□□ -0.31
HDLBP-213ENST00000427007 GREM2Q9H772 168 aa13.12□□□□□ -0.31
HDLBP-213ENST00000427007 GBA2Q9HCG7 927 aaPredicted RBP13.12□□□□□ -0.31
HDLBP-213ENST00000427007 ZNF646O15015 1829 aaPredicted RBP13.11□□□□□ -0.31
HDLBP-213ENST00000427007 NEURL1BA8MQ27 555 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 SLC4A2P04920 1241 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 ATP2B4P23634 1241 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 NOGQ13253 232 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 RGMBQ6NW40 437 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 SULF1Q8IWU6 871 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 C2orf69Q8N8R5 385 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 TTLL11Q8NHH1 800 aa13.11□□□□□ -0.31
HDLBP-213ENST00000427007 CA12O43570 354 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 SCARF1Q14162 830 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 CCDC27Q2M243 656 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 ANGEL2Q5VTE6 544 aaKnown RBP13.1□□□□□ -0.31
HDLBP-213ENST00000427007 UBE3BQ7Z3V4 1068 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 AGBL3Q8NEM8 1001 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 CASP8AP2Q9UKL3 1982 aa13.1□□□□□ -0.31
HDLBP-213ENST00000427007 MED23Q9ULK4 1368 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 USP17L3A6NCW0 530 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 USP17L4A6NCW7 530 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 CCDC85CA6NKD9 419 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 FAM155AB1AL88 458 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 ZNF609O15014 1411 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 ZNF157P51786 506 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 ZNF280AP59817 542 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 USP17L1Q7RTZ2 530 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 FBXW7Q969H0 707 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 MYOZ2Q9NPC6 264 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 BSDC1Q9NW68 430 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 MINPP1Q9UNW1 487 aa13.09□□□□□ -0.31
HDLBP-213ENST00000427007 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 SALL2Q9Y467 1007 aaPredicted RBP13.09□□□□□ -0.31
HDLBP-213ENST00000427007 H7C1W4 665 aa13.08□□□□□ -0.32
HDLBP-213ENST00000427007 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
HDLBP-213ENST00000427007 CCT4P50991 539 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms