RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FBXO46Q6PJ61 603 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-206ENST00000426196 KCNQ5Q9NR82 932 aa18.66■□□□□ 0.58
HDAC6-206ENST00000426196 ASTN2O75129 1339 aaPredicted RBP18.66■□□□□ 0.58
HDAC6-206ENST00000426196 TBC1D8O95759 1140 aa18.65■□□□□ 0.58
HDAC6-206ENST00000426196 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
HDAC6-206ENST00000426196 AIMP1Q12904 312 aaKnown RBP18.65■□□□□ 0.58
HDAC6-206ENST00000426196 ANGEL2Q5VTE6 544 aaKnown RBP18.65■□□□□ 0.58
HDAC6-206ENST00000426196 COPS6Q7L5N1 327 aa18.65■□□□□ 0.58
HDAC6-206ENST00000426196 PSME4Q14997 1843 aa18.65■□□□□ 0.58
HDAC6-206ENST00000426196 KIAA0100Q14667 2235 aaKnown RBP18.64■□□□□ 0.57
HDAC6-206ENST00000426196 G3V3G9 751 aa18.64■□□□□ 0.57
HDAC6-206ENST00000426196 GPSM2P81274 684 aa18.64■□□□□ 0.57
HDAC6-206ENST00000426196 NOM1Q5C9Z4 860 aaKnown RBP18.64■□□□□ 0.57
HDAC6-206ENST00000426196 DCAF8Q5TAQ9 597 aa18.64■□□□□ 0.57
HDAC6-206ENST00000426196 XAGE3Q8WTP9 111 aa18.64■□□□□ 0.57
HDAC6-206ENST00000426196 CELF1Q92879 486 aaKnown RBP18.64■□□□□ 0.57
HDAC6-206ENST00000426196 SCARF1Q14162 830 aa18.63■□□□□ 0.57
HDAC6-206ENST00000426196 HABP4Q5JVS0 413 aaKnown RBP18.63■□□□□ 0.57
HDAC6-206ENST00000426196 CCER1Q8TC90 406 aaPredicted RBP18.63■□□□□ 0.57
HDAC6-206ENST00000426196 ZC3H12CQ9C0D7 883 aaKnown RBP18.63■□□□□ 0.57
HDAC6-206ENST00000426196 BRCA2P51587 3418 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 GPR25O00155 361 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 ZNF280AP59817 542 aaPredicted RBP18.62■□□□□ 0.57
HDAC6-206ENST00000426196 SF3B3Q15393 1217 aaKnown RBP18.62■□□□□ 0.57
HDAC6-206ENST00000426196 AGBL3Q8NEM8 1001 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 TBC1D16Q8TBP0 767 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 PITPNM2Q9BZ72 1349 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 MAPK8IP3Q9UPT6 1336 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 ZNF609O15014 1411 aa18.62■□□□□ 0.57
HDAC6-206ENST00000426196 TTLL12Q14166 644 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-206ENST00000426196 RSBN1LQ6PCB5 846 aaPredicted RBP18.6■□□□□ 0.57
HDAC6-206ENST00000426196 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
HDAC6-206ENST00000426196 ZNF428Q96B54 188 aa18.6■□□□□ 0.57
HDAC6-206ENST00000426196 PLEKHF1Q96S99 279 aa18.6■□□□□ 0.57
HDAC6-206ENST00000426196 UBE2Q2LH0YL09 131 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 FKTNO75072 461 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 TM4SF4P48230 202 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 SREBF2Q12772 1141 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 MOB2Q70IA6 237 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
HDAC6-206ENST00000426196 COL4A1P02462 1669 aa18.59■□□□□ 0.57
HDAC6-206ENST00000426196 UFL1O94874 794 aa18.58■□□□□ 0.56
HDAC6-206ENST00000426196 RPS8P62241 208 aaKnown RBP18.58■□□□□ 0.56
HDAC6-206ENST00000426196 FAM89AQ96GI7 184 aa18.58■□□□□ 0.56
HDAC6-206ENST00000426196 MYOZ2Q9NPC6 264 aa18.58■□□□□ 0.56
HDAC6-206ENST00000426196 BABAM1Q9NWV8 329 aa18.58■□□□□ 0.56
HDAC6-206ENST00000426196 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.56
HDAC6-206ENST00000426196 USP17L8P0C7I0 530 aa18.57■□□□□ 0.56
HDAC6-206ENST00000426196 NF2P35240 595 aa18.57■□□□□ 0.56
HDAC6-206ENST00000426196 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
HDAC6-206ENST00000426196 GGA1Q9UJY5 639 aa18.57■□□□□ 0.56
HDAC6-206ENST00000426196 RBBP6Q7Z6E9 1792 aaKnown RBP18.56■□□□□ 0.56
HDAC6-206ENST00000426196 MKRN3Q13064 507 aaKnown RBP18.56■□□□□ 0.56
HDAC6-206ENST00000426196 PLBD2Q8NHP8 589 aa18.56■□□□□ 0.56
HDAC6-206ENST00000426196 CFHR5Q9BXR6 569 aa18.56■□□□□ 0.56
HDAC6-206ENST00000426196 CEP290O15078 2479 aa18.55■□□□□ 0.56
HDAC6-206ENST00000426196 INTS3Q68E01 1043 aaKnown RBP18.55■□□□□ 0.56
HDAC6-206ENST00000426196 IRS4O14654 1257 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-206ENST00000426196 RTL5Q5HYW3 569 aaPredicted RBP18.54■□□□□ 0.56
HDAC6-206ENST00000426196 GMLQ99445 158 aa18.54■□□□□ 0.56
HDAC6-206ENST00000426196 ISCA1Q9BUE6 129 aa18.54■□□□□ 0.56
HDAC6-206ENST00000426196 SCAF8Q9UPN6 1271 aaKnown RBP18.54■□□□□ 0.56
HDAC6-206ENST00000426196 USP17L3A6NCW0 530 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 USP17L4A6NCW7 530 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 ATP5J2-PTCD1G3V325 749 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 ALDH1A1P00352 501 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 PRAMEF18Q5VWM3 479 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 ANKRD13DQ6ZTN6 518 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 USP17L1Q7RTZ2 530 aa18.53■□□□□ 0.56
HDAC6-206ENST00000426196 HSP90B1P14625 803 aaKnown RBP18.52■□□□□ 0.56
HDAC6-206ENST00000426196 ARMC9Q7Z3E5 817 aa18.52■□□□□ 0.56
HDAC6-206ENST00000426196 CHPF2Q9P2E5 772 aa18.52■□□□□ 0.56
HDAC6-206ENST00000426196 TRIM17Q9Y577 477 aa18.52■□□□□ 0.56
HDAC6-206ENST00000426196 POTEFA5A3E0 1075 aa18.51■□□□□ 0.55
HDAC6-206ENST00000426196 RIPK4P57078 832 aa18.51■□□□□ 0.55
HDAC6-206ENST00000426196 LMOD3Q0VAK6 560 aa18.51■□□□□ 0.55
HDAC6-206ENST00000426196 NBPF9Q3BBW0 867 aa18.51■□□□□ 0.55
HDAC6-206ENST00000426196 R3HDMLQ9H3Y0 253 aa18.51■□□□□ 0.55
HDAC6-206ENST00000426196 TRIOBPQ9H2D6 2365 aa18.5■□□□□ 0.55
HDAC6-206ENST00000426196 FXR1P51114 621 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC6-206ENST00000426196 PODNQ7Z5L7 613 aa18.5■□□□□ 0.55
HDAC6-206ENST00000426196 OGFOD1Q8N543 542 aa18.5■□□□□ 0.55
HDAC6-206ENST00000426196 SEC31BQ9NQW1 1179 aa18.5■□□□□ 0.55
HDAC6-206ENST00000426196 XDHP47989 1333 aa18.49■□□□□ 0.55
HDAC6-206ENST00000426196 PTPN12Q05209 780 aaKnown RBP18.49■□□□□ 0.55
HDAC6-206ENST00000426196 HDGFL1Q5TGJ6 251 aa18.49■□□□□ 0.55
HDAC6-206ENST00000426196 OTOP1Q7RTM1 612 aa18.49■□□□□ 0.55
HDAC6-206ENST00000426196 TRIM28Q13263 835 aaKnown RBP18.48■□□□□ 0.55
HDAC6-206ENST00000426196 CCDC152Q4G0S7 254 aa18.48■□□□□ 0.55
HDAC6-206ENST00000426196 SPRYD7Q5W111 196 aa18.48■□□□□ 0.55
HDAC6-206ENST00000426196 SZT2Q5T011 3432 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 WNT10BO00744 389 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 ATP2B4P23634 1241 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 INHBEP58166 350 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 KRT24Q2M2I5 525 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 ZBTB38Q8NAP3 1195 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-206ENST00000426196 DBF4Q9UBU7 674 aaPredicted RBP18.47■□□□□ 0.55
HDAC6-206ENST00000426196 MYO3BQ8WXR4 1341 aa18.47■□□□□ 0.55
HDAC6-206ENST00000426196 LAMB1P07942 1786 aa18.46■□□□□ 0.55
HDAC6-206ENST00000426196 MANSC4A6NHS7 340 aaPredicted RBP18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms