RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 CDC5LQ99459 802 aaKnown RBP17.26■□□□□ 0.35
SNX3-204ENST00000426155 C9orf78Q9NZ63 289 aaPredicted RBP17.26■□□□□ 0.35
SNX3-204ENST00000426155 CSF1RP07333 972 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 CT47B1P0C2W7 299 aaPredicted RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 NBPF7P0C2Y1 421 aaPredicted RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 RARSP54136 660 aaKnown RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 EIF6P56537 245 aaKnown RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 GPC2Q8N158 579 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 RBM46Q8TBY0 533 aaKnown RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 SUCLG2Q96I99 432 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 DBNDD1Q9H9R9 158 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 NOB1Q9ULX3 412 aaKnown RBP17.25■□□□□ 0.35
SNX3-204ENST00000426155 CHMP3Q9Y3E7 222 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 PSME4Q14997 1843 aa17.25■□□□□ 0.35
SNX3-204ENST00000426155 ZNF646O15015 1829 aaPredicted RBP17.24■□□□□ 0.35
SNX3-204ENST00000426155 YDJCA8MPS7 323 aa17.24■□□□□ 0.35
SNX3-204ENST00000426155 UFL1O94874 794 aa17.24■□□□□ 0.35
SNX3-204ENST00000426155 KAZALD1Q96I82 304 aa17.24■□□□□ 0.35
SNX3-204ENST00000426155 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
SNX3-204ENST00000426155 ZBED9Q6R2W3 1325 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 CEP350Q5VT06 3117 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 RAD17O75943 681 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 CXCL9Q07325 125 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 DOK7Q18PE1 504 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 WASHC4Q2M389 1173 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 LMBR1LQ6UX01 489 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 VPS33BQ9H267 617 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 ZNRF3Q9ULT6 936 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 MINPP1Q9UNW1 487 aa17.23■□□□□ 0.35
SNX3-204ENST00000426155 XDHP47989 1333 aa17.22■□□□□ 0.35
SNX3-204ENST00000426155 IGHMBP2P38935 993 aaKnown RBP17.22■□□□□ 0.35
SNX3-204ENST00000426155 SCNN1DP51172 638 aa17.22■□□□□ 0.35
SNX3-204ENST00000426155 TAF1DQ9H5J8 278 aaPredicted RBP17.22■□□□□ 0.35
SNX3-204ENST00000426155 BSDC1Q9NW68 430 aaPredicted RBP17.22■□□□□ 0.35
SNX3-204ENST00000426155 GGA1Q9UJY5 639 aa17.22■□□□□ 0.35
SNX3-204ENST00000426155 UTYO14607 1347 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 IQCA1LA6NCM1 817 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 BCAR3O75815 825 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 HSPA6P17066 643 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 ZNF594Q96JF6 807 aaPredicted RBP17.21■□□□□ 0.35
SNX3-204ENST00000426155 HACL1Q9UJ83 578 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 TNNQ9UQP3 1299 aa17.21■□□□□ 0.35
SNX3-204ENST00000426155 ANKRD18BA2A2Z9 1011 aa17.2■□□□□ 0.34
SNX3-204ENST00000426155 ECE2O60344 883 aa17.2■□□□□ 0.34
SNX3-204ENST00000426155 EAPPQ56P03 285 aaPredicted RBP17.2■□□□□ 0.34
SNX3-204ENST00000426155 SMC1BQ8NDV3 1235 aa17.2■□□□□ 0.34
SNX3-204ENST00000426155 EYA3Q99504 573 aa17.2■□□□□ 0.34
SNX3-204ENST00000426155 BICC1Q9H694 974 aaKnown RBP17.2■□□□□ 0.34
SNX3-204ENST00000426155 KCNQ5Q9NR82 932 aa17.2■□□□□ 0.34
SNX3-204ENST00000426155 EPHX2P34913 555 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 EPS15P42566 896 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 BRPF1P55201 1214 aaPredicted RBP17.19■□□□□ 0.34
SNX3-204ENST00000426155 IFIT5Q13325 482 aaKnown RBP17.19■□□□□ 0.34
SNX3-204ENST00000426155 CIAPIN1Q6FI81 312 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 MPHOSPH8Q99549 860 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 USP44Q9H0E7 712 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 KIF16BQ96L93 1317 aa17.19■□□□□ 0.34
SNX3-204ENST00000426155 SHTN1A0MZ66 631 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 SNAP23O00161 211 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 ABCB7O75027 752 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 MYCNP04198 464 aaPredicted RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 ATP2B4P23634 1241 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 KLRK1P26718 216 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 GMPSP49915 693 aaPredicted RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 HTRA3P83110 453 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 CHRNDQ07001 517 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 FSTL1Q12841 308 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 ANKRD44Q8N8A2 993 aa17.18■□□□□ 0.34
SNX3-204ENST00000426155 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 ZBTB12Q9Y330 459 aaPredicted RBP17.18■□□□□ 0.34
SNX3-204ENST00000426155 CCDC57Q2TAC2 916 aa17.17■□□□□ 0.34
SNX3-204ENST00000426155 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
SNX3-204ENST00000426155 HELBQ8NG08 1087 aaPredicted RBP17.17■□□□□ 0.34
SNX3-204ENST00000426155 FRAT1Q92837 279 aaPredicted RBP17.17■□□□□ 0.34
SNX3-204ENST00000426155 MED23Q9ULK4 1368 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 PSMD14O00487 310 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 TAF5LO75529 589 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 LMOD1P29536 600 aaPredicted RBP17.16■□□□□ 0.34
SNX3-204ENST00000426155 RABL6Q3YEC7 729 aaPredicted RBP17.16■□□□□ 0.34
SNX3-204ENST00000426155 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 CHADLQ6NUI6 762 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 GPRC5DQ9NZD1 345 aa17.16■□□□□ 0.34
SNX3-204ENST00000426155 TRIM27P14373 513 aa17.15■□□□□ 0.34
SNX3-204ENST00000426155 PUS3Q9BZE2 481 aaKnown RBP17.15■□□□□ 0.34
SNX3-204ENST00000426155 G3V3G9 751 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 TNIP1Q15025 636 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 LDHDQ86WU2 507 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 KLHDC4Q8TBB5 520 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 CLEC11AQ9Y240 323 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 ZNF804BA4D1E1 1349 aa17.14■□□□□ 0.33
SNX3-204ENST00000426155 MAP1SQ66K74 1059 aaPredicted RBP17.13■□□□□ 0.33
SNX3-204ENST00000426155 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
SNX3-204ENST00000426155 MEIS3Q99687 375 aa17.13■□□□□ 0.33
SNX3-204ENST00000426155 ANKRD2Q9GZV1 360 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms