RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 SP8Q8IXZ3 490 aa19.34■□□□□ 0.69
SHOX2-202ENST00000425436 SRGAP3O43295 1099 aa19.33■□□□□ 0.68
SHOX2-202ENST00000425436 MPHOSPH8Q99549 860 aa19.33■□□□□ 0.68
SHOX2-202ENST00000425436 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
SHOX2-202ENST00000425436 GRIN3BO60391 1043 aa19.32■□□□□ 0.68
SHOX2-202ENST00000425436 RFX5P48382 616 aaPredicted RBP19.32■□□□□ 0.68
SHOX2-202ENST00000425436 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
SHOX2-202ENST00000425436 BSDC1Q9NW68 430 aaPredicted RBP19.32■□□□□ 0.68
SHOX2-202ENST00000425436 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
SHOX2-202ENST00000425436 LDHAL6AQ6ZMR3 332 aa19.31■□□□□ 0.68
SHOX2-202ENST00000425436 PUS3Q9BZE2 481 aaKnown RBP19.31■□□□□ 0.68
SHOX2-202ENST00000425436 GPSM2P81274 684 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 ATP8B2P98198 1209 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 TMC4Q7Z404 712 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 RPAP2Q8IXW5 612 aaPredicted RBP19.3■□□□□ 0.68
SHOX2-202ENST00000425436 MINPP1Q9UNW1 487 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 NSFL1CQ9UNZ2 370 aaKnown RBP19.3■□□□□ 0.68
SHOX2-202ENST00000425436 PA2G4Q9UQ80 394 aaKnown RBP19.3■□□□□ 0.68
SHOX2-202ENST00000425436 RASSF7Q02833 373 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 PTPN12Q05209 780 aaKnown RBP19.3■□□□□ 0.68
SHOX2-202ENST00000425436 MTX1Q13505 466 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 SOGA3Q5TF21 947 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 CEP85Q6P2H3 762 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 CNNM1Q9NRU3 951 aa19.3■□□□□ 0.68
SHOX2-202ENST00000425436 FER1L6Q2WGJ9 1857 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 NFKBIEO00221 500 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 LRRC24Q50LG9 513 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 CC2D2BQ6DHV5 1058 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 SKAP1Q86WV1 359 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 RTKN2Q8IZC4 609 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 MPNDQ8N594 471 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 SIL1Q9H173 461 aa19.29■□□□□ 0.68
SHOX2-202ENST00000425436 WTIPA6NIX2 430 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-202ENST00000425436 NUCB1Q02818 461 aa19.28■□□□□ 0.68
SHOX2-202ENST00000425436 DPP8Q6V1X1 898 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-202ENST00000425436 HELBQ8NG08 1087 aaPredicted RBP19.28■□□□□ 0.68
SHOX2-202ENST00000425436 ANKIB1Q9P2G1 1089 aa19.28■□□□□ 0.68
SHOX2-202ENST00000425436 CHRNDQ07001 517 aa19.27■□□□□ 0.68
SHOX2-202ENST00000425436 C8orf34Q49A92 452 aa19.27■□□□□ 0.68
SHOX2-202ENST00000425436 LRRC37AA6NMS7 1700 aa19.27■□□□□ 0.68
SHOX2-202ENST00000425436 CCDC88AQ3V6T2 1871 aa19.27■□□□□ 0.67
SHOX2-202ENST00000425436 TAF5LO75529 589 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 PRELPP51888 382 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 SIRT2Q8IXJ6 389 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 TAOK3Q9H2K8 898 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
SHOX2-202ENST00000425436 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 SNED1Q8TER0 1413 aa19.26■□□□□ 0.67
SHOX2-202ENST00000425436 FKBP4Q02790 459 aaKnown RBP eCLIP19.25■□□□□ 0.67
SHOX2-202ENST00000425436 POLA2Q14181 598 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 SSH3Q8TE77 659 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 GPR101Q96P66 508 aaPredicted RBP19.25■□□□□ 0.67
SHOX2-202ENST00000425436 COPRSQ9NQ92 184 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 POLLQ9UGP5 575 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 C6orf229H3BNL8 230 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 SNAP23O00161 211 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 EYA2O00167 538 aa19.25■□□□□ 0.67
SHOX2-202ENST00000425436 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
SHOX2-202ENST00000425436 SBF1O95248 1867 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 GRIPAP1Q4V328 841 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 ATG9AQ7Z3C6 839 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 CHD1LQ86WJ1 897 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 TBC1D16Q8TBP0 767 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 PSMD1Q99460 953 aa19.24■□□□□ 0.67
SHOX2-202ENST00000425436 HMMRO75330 724 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 UFL1O94874 794 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 ANKRD2Q9GZV1 360 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 PODXL2Q9NZ53 605 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 GGA1Q9UJY5 639 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 XDHP47989 1333 aa19.23■□□□□ 0.67
SHOX2-202ENST00000425436 RIMBP2O15034 1052 aa19.22■□□□□ 0.67
SHOX2-202ENST00000425436 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
SHOX2-202ENST00000425436 METTL24Q5JXM2 366 aa19.22■□□□□ 0.67
SHOX2-202ENST00000425436 RTFDC1Q9BY42 306 aaPredicted RBP19.22■□□□□ 0.67
SHOX2-202ENST00000425436 DUOX1Q9NRD9 1551 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 C9orf131Q5VYM1 1079 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 DDRGK1Q96HY6 314 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 DCTPP1Q9H773 170 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 ZBTB47Q9UFB7 747 aaPredicted RBP19.21■□□□□ 0.67
SHOX2-202ENST00000425436 LTBP1Q14766 1721 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 MROH5Q6ZUA9 1318 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 LTBP3Q9NS15 1303 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 A0A1B0GUL6 1792 aa19.21■□□□□ 0.67
SHOX2-202ENST00000425436 CIAO1O76071 339 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 LMNB1P20700 586 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 ATP2B4P23634 1241 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 IARSP41252 1262 aaKnown RBP19.2■□□□□ 0.66
SHOX2-202ENST00000425436 KCNJ4P48050 445 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 G3BP1Q13283 466 aaKnown RBP eCLIP19.2■□□□□ 0.66
SHOX2-202ENST00000425436 AOC3Q16853 763 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 SUPT20HQ8NEM7 779 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 RNF181Q9P0P0 153 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 PPIP5K2O43314 1243 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 WASHC4Q2M389 1173 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 EXOC6BQ9Y2D4 811 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 ZNF804BA4D1E1 1349 aa19.2■□□□□ 0.66
SHOX2-202ENST00000425436 PDE8BO95263 885 aa19.19■□□□□ 0.66
SHOX2-202ENST00000425436 KLRK1P26718 216 aa19.19■□□□□ 0.66
SHOX2-202ENST00000425436 IL15P40933 162 aaPredicted RBP19.19■□□□□ 0.66
SHOX2-202ENST00000425436 OS9Q13438 667 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms