RNA–Protein interactions for RNA: ENST00000425208.6

HMGA2-205, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best) BASIC

Gene HMGA2, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-205ENST00000425208 SUPT16HQ9Y5B9 1047 aaKnown RBP27.37■■□□□ 1.97
HMGA2-205ENST00000425208 LMNB1P20700 586 aa27.36■■□□□ 1.97
HMGA2-205ENST00000425208 CNNM1Q9NRU3 951 aa27.36■■□□□ 1.97
HMGA2-205ENST00000425208 ANKIB1Q9P2G1 1089 aa27.36■■□□□ 1.97
HMGA2-205ENST00000425208 DUOX1Q9NRD9 1551 aa27.36■■□□□ 1.97
HMGA2-205ENST00000425208 XDHP47989 1333 aa27.35■■□□□ 1.97
HMGA2-205ENST00000425208 SRGAP3O43295 1099 aa27.35■■□□□ 1.97
HMGA2-205ENST00000425208 GPSM2P81274 684 aa27.35■■□□□ 1.97
HMGA2-205ENST00000425208 SUPT20HQ8NEM7 779 aa27.35■■□□□ 1.97
HMGA2-205ENST00000425208 DICER1Q9UPY3 1922 aaKnown RBP27.34■■□□□ 1.97
HMGA2-205ENST00000425208 RTFDC1Q9BY42 306 aaPredicted RBP27.34■■□□□ 1.97
HMGA2-205ENST00000425208 ZNF277Q9NRM2 450 aaPredicted RBP27.34■■□□□ 1.97
HMGA2-205ENST00000425208 ZBTB40Q9NUA8 1239 aa27.34■■□□□ 1.97
HMGA2-205ENST00000425208 PODXL2Q9NZ53 605 aa27.34■■□□□ 1.97
HMGA2-205ENST00000425208 A0A1B0GUL6 1792 aa27.34■■□□□ 1.97
HMGA2-205ENST00000425208 RFX5P48382 616 aaPredicted RBP27.33■■□□□ 1.97
HMGA2-205ENST00000425208 C9orf131Q5VYM1 1079 aa27.33■■□□□ 1.96
HMGA2-205ENST00000425208 KLHDC4Q8TBB5 520 aa27.33■■□□□ 1.96
HMGA2-205ENST00000425208 ANKRD2Q9GZV1 360 aa27.33■■□□□ 1.96
HMGA2-205ENST00000425208 RNF181Q9P0P0 153 aa27.33■■□□□ 1.96
HMGA2-205ENST00000425208 IARSP41252 1262 aaKnown RBP27.32■■□□□ 1.96
HMGA2-205ENST00000425208 PRELPP51888 382 aa27.32■■□□□ 1.96
HMGA2-205ENST00000425208 PTPN12Q05209 780 aaKnown RBP27.32■■□□□ 1.96
HMGA2-205ENST00000425208 CHRNDQ07001 517 aa27.32■■□□□ 1.96
HMGA2-205ENST00000425208 GGA1Q9UJY5 639 aa27.32■■□□□ 1.96
HMGA2-205ENST00000425208 TIAM2Q8IVF5 1701 aa27.31■■□□□ 1.96
HMGA2-205ENST00000425208 PNMA6EA0A0J9YXQ4 647 aa27.3■■□□□ 1.96
HMGA2-205ENST00000425208 C6orf229H3BNL8 230 aa27.3■■□□□ 1.96
HMGA2-205ENST00000425208 UFL1O94874 794 aa27.3■■□□□ 1.96
HMGA2-205ENST00000425208 TBC1D16Q8TBP0 767 aa27.3■■□□□ 1.96
HMGA2-205ENST00000425208 PUS3Q9BZE2 481 aaKnown RBP27.3■■□□□ 1.96
HMGA2-205ENST00000425208 ATP2B4P23634 1241 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 ATP8B2P98198 1209 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 CEP85Q6P2H3 762 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 VPS33BQ9H267 617 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 COPRSQ9NQ92 184 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 POLLQ9UGP5 575 aa27.29■■□□□ 1.96
HMGA2-205ENST00000425208 MROH5Q6ZUA9 1318 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 PPIP5K2O43314 1243 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 LRRC24Q50LG9 513 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 EYA3Q99504 573 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 FBXO3Q9UK99 471 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 RIPOR2Q9Y4F9 1068 aa27.28■■□□□ 1.96
HMGA2-205ENST00000425208 EYA2O00167 538 aa27.27■■□□□ 1.96
HMGA2-205ENST00000425208 LARGE2Q8N3Y3 721 aa27.27■■□□□ 1.96
HMGA2-205ENST00000425208 CRBNQ96SW2 442 aa27.27■■□□□ 1.96
HMGA2-205ENST00000425208 SIL1Q9H173 461 aa27.27■■□□□ 1.96
HMGA2-205ENST00000425208 PA2G4Q9UQ80 394 aaKnown RBP27.27■■□□□ 1.96
HMGA2-205ENST00000425208 LEMD3Q9Y2U8 911 aa27.27■■□□□ 1.96
HMGA2-205ENST00000425208 KCNJ4P48050 445 aa27.26■■□□□ 1.95
HMGA2-205ENST00000425208 KIAA2012Q0VF49 1180 aa27.26■■□□□ 1.95
HMGA2-205ENST00000425208 AOC3Q16853 763 aa27.26■■□□□ 1.95
HMGA2-205ENST00000425208 WASHC4Q2M389 1173 aa27.26■■□□□ 1.95
HMGA2-205ENST00000425208 CIAO1O76071 339 aa27.25■■□□□ 1.95
HMGA2-205ENST00000425208 POLA2Q14181 598 aa27.25■■□□□ 1.95
HMGA2-205ENST00000425208 HELBQ8NG08 1087 aaPredicted RBP27.25■■□□□ 1.95
HMGA2-205ENST00000425208 SSH3Q8TE77 659 aa27.25■■□□□ 1.95
HMGA2-205ENST00000425208 ZC3H4Q9UPT8 1303 aaKnown RBP27.25■■□□□ 1.95
HMGA2-205ENST00000425208 TAF5LO75529 589 aa27.24■■□□□ 1.95
HMGA2-205ENST00000425208 METTL24Q5JXM2 366 aa27.24■■□□□ 1.95
HMGA2-205ENST00000425208 RPAP2Q8IXW5 612 aaPredicted RBP27.24■■□□□ 1.95
HMGA2-205ENST00000425208 JDP2Q8WYK2 163 aa27.24■■□□□ 1.95
HMGA2-205ENST00000425208 ZNF804BA4D1E1 1349 aa27.24■■□□□ 1.95
HMGA2-205ENST00000425208 GPR101Q96P66 508 aaPredicted RBP27.24■■□□□ 1.95
HMGA2-205ENST00000425208 ZC3H12CQ9C0D7 883 aaKnown RBP27.24■■□□□ 1.95
HMGA2-205ENST00000425208 IL15P40933 162 aaPredicted RBP27.23■■□□□ 1.95
HMGA2-205ENST00000425208 COL4A5P29400 1685 aa27.22■■□□□ 1.95
HMGA2-205ENST00000425208 MED23Q9ULK4 1368 aa27.22■■□□□ 1.95
HMGA2-205ENST00000425208 RIMBP2O15034 1052 aa27.22■■□□□ 1.95
HMGA2-205ENST00000425208 ATG9AQ7Z3C6 839 aa27.22■■□□□ 1.95
HMGA2-205ENST00000425208 NIM1KQ8IY84 436 aa27.22■■□□□ 1.95
HMGA2-205ENST00000425208 HMMRO75330 724 aa27.21■■□□□ 1.95
HMGA2-205ENST00000425208 CENPBP07199 599 aaPredicted RBP27.21■■□□□ 1.95
HMGA2-205ENST00000425208 YY1P25490 414 aa27.21■■□□□ 1.95
HMGA2-205ENST00000425208 WTIPA6NIX2 430 aaPredicted RBP27.2■■□□□ 1.94
HMGA2-205ENST00000425208 PDE8BO95263 885 aa27.2■■□□□ 1.94
HMGA2-205ENST00000425208 VGLL2Q8N8G2 317 aa27.2■■□□□ 1.94
HMGA2-205ENST00000425208 G3BP1Q13283 466 aaKnown RBP eCLIP27.19■■□□□ 1.94
HMGA2-205ENST00000425208 UBE4AQ14139 1066 aa27.18■■□□□ 1.94
HMGA2-205ENST00000425208 CEP126Q9P2H0 1117 aa27.18■■□□□ 1.94
HMGA2-205ENST00000425208 SNAP23O00161 211 aa27.17■■□□□ 1.94
HMGA2-205ENST00000425208 SURF6O75683 361 aaKnown RBP27.17■■□□□ 1.94
HMGA2-205ENST00000425208 G3V3G9 751 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 FZD9O00144 591 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 OS9Q13438 667 aaPredicted RBP27.16■■□□□ 1.94
HMGA2-205ENST00000425208 AAMPQ13685 434 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 PUM3Q15397 648 aaKnown RBP27.16■■□□□ 1.94
HMGA2-205ENST00000425208 DCAF8Q5TAQ9 597 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 SIRT2Q8IXJ6 389 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 ZNRF3Q9ULT6 936 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 KLRK1P26718 216 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 DBNDD1Q9H9R9 158 aa27.16■■□□□ 1.94
HMGA2-205ENST00000425208 ECE2O60344 883 aa27.15■■□□□ 1.94
HMGA2-205ENST00000425208 EIF6P56537 245 aaKnown RBP27.15■■□□□ 1.94
HMGA2-205ENST00000425208 DOK7Q18PE1 504 aa27.15■■□□□ 1.94
HMGA2-205ENST00000425208 C15orf52Q6ZUT6 534 aaKnown RBP27.15■■□□□ 1.94
HMGA2-205ENST00000425208 NOP58Q9Y2X3 529 aaKnown RBP27.15■■□□□ 1.94
HMGA2-205ENST00000425208 TXNRD3Q86VQ6 643 aa27.14■■□□□ 1.93
HMGA2-205ENST00000425208 IRS2Q9Y4H2 1338 aa27.13■■□□□ 1.93
HMGA2-205ENST00000425208 DPY19L2Q6NUT2 758 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms