RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 SNED1Q8TER0 1413 aa31.73■■■□□ 2.67
TSPAN3-203ENST00000424443 GPSM2P81274 684 aa31.72■■■□□ 2.67
TSPAN3-203ENST00000424443 MINPP1Q9UNW1 487 aa31.72■■■□□ 2.67
TSPAN3-203ENST00000424443 SBF1O95248 1867 aa31.71■■■□□ 2.67
TSPAN3-203ENST00000424443 C6orf229H3BNL8 230 aa31.7■■■□□ 2.67
TSPAN3-203ENST00000424443 XDHP47989 1333 aa31.7■■■□□ 2.66
TSPAN3-203ENST00000424443 IARSP41252 1262 aaKnown RBP31.7■■■□□ 2.66
TSPAN3-203ENST00000424443 CCDC88AQ3V6T2 1871 aa31.7■■■□□ 2.66
TSPAN3-203ENST00000424443 RTFDC1Q9BY42 306 aaPredicted RBP31.7■■■□□ 2.66
TSPAN3-203ENST00000424443 ANKRD2Q9GZV1 360 aa31.7■■■□□ 2.66
TSPAN3-203ENST00000424443 YY1P25490 414 aa31.69■■■□□ 2.66
TSPAN3-203ENST00000424443 PODXL2Q9NZ53 605 aa31.69■■■□□ 2.66
TSPAN3-203ENST00000424443 GGA1Q9UJY5 639 aa31.69■■■□□ 2.66
TSPAN3-203ENST00000424443 PRELPP51888 382 aa31.68■■■□□ 2.66
TSPAN3-203ENST00000424443 C1orf115Q9H7X2 142 aa31.68■■■□□ 2.66
TSPAN3-203ENST00000424443 SRGAP3O43295 1099 aa31.67■■■□□ 2.66
TSPAN3-203ENST00000424443 VPS33BQ9H267 617 aa31.67■■■□□ 2.66
TSPAN3-203ENST00000424443 PPIP5K2O43314 1243 aa31.66■■■□□ 2.66
TSPAN3-203ENST00000424443 UFL1O94874 794 aa31.66■■■□□ 2.66
TSPAN3-203ENST00000424443 LARGE2Q8N3Y3 721 aa31.66■■■□□ 2.66
TSPAN3-203ENST00000424443 EYA3Q99504 573 aa31.66■■■□□ 2.66
TSPAN3-203ENST00000424443 ATP2B4P23634 1241 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 CHRNDQ07001 517 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 MTX1Q13505 466 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 TBC1D16Q8TBP0 767 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 JDP2Q8WYK2 163 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 WASHC4Q2M389 1173 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 KLHDC4Q8TBB5 520 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 POLLQ9UGP5 575 aa31.65■■■□□ 2.66
TSPAN3-203ENST00000424443 KCNJ4P48050 445 aa31.64■■■□□ 2.66
TSPAN3-203ENST00000424443 AOC3Q16853 763 aa31.64■■■□□ 2.66
TSPAN3-203ENST00000424443 RFX5P48382 616 aaPredicted RBP31.63■■■□□ 2.65
TSPAN3-203ENST00000424443 PTPN12Q05209 780 aaKnown RBP31.63■■■□□ 2.65
TSPAN3-203ENST00000424443 PUS3Q9BZE2 481 aaKnown RBP31.63■■■□□ 2.65
TSPAN3-203ENST00000424443 ZC3H12CQ9C0D7 883 aaKnown RBP31.62■■■□□ 2.65
TSPAN3-203ENST00000424443 LEMD3Q9Y2U8 911 aa31.62■■■□□ 2.65
TSPAN3-203ENST00000424443 SUPT16HQ9Y5B9 1047 aaKnown RBP31.62■■■□□ 2.65
TSPAN3-203ENST00000424443 ZC3H4Q9UPT8 1303 aaKnown RBP31.62■■■□□ 2.65
TSPAN3-203ENST00000424443 DICER1Q9UPY3 1922 aaKnown RBP31.61■■■□□ 2.65
TSPAN3-203ENST00000424443 HELBQ8NG08 1087 aaPredicted RBP31.61■■■□□ 2.65
TSPAN3-203ENST00000424443 MROH5Q6ZUA9 1318 aa31.61■■■□□ 2.65
TSPAN3-203ENST00000424443 DUOX1Q9NRD9 1551 aa31.61■■■□□ 2.65
TSPAN3-203ENST00000424443 RIMBP2O15034 1052 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 KIAA2012Q0VF49 1180 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 LRRC24Q50LG9 513 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 NIM1KQ8IY84 436 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 SIL1Q9H173 461 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 ZBTB40Q9NUA8 1239 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 LTBP1Q14766 1721 aa31.6■■■□□ 2.65
TSPAN3-203ENST00000424443 TAF5LO75529 589 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 ATP8B2P98198 1209 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 FBXO3Q9UK99 471 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 RIPOR2Q9Y4F9 1068 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 G3V3G9 751 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 EYA2O00167 538 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 METTL24Q5JXM2 366 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 DCAF8Q5TAQ9 597 aa31.59■■■□□ 2.65
TSPAN3-203ENST00000424443 TIAM2Q8IVF5 1701 aa31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 PNMA6EA0A0J9YXQ4 647 aa31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 GPR101Q96P66 508 aaPredicted RBP31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 COPRSQ9NQ92 184 aa31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 PA2G4Q9UQ80 394 aaKnown RBP31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 ZNF804BA4D1E1 1349 aa31.58■■■□□ 2.65
TSPAN3-203ENST00000424443 CEP85Q6P2H3 762 aa31.56■■■□□ 2.64
TSPAN3-203ENST00000424443 CIAO1O76071 339 aa31.55■■■□□ 2.64
TSPAN3-203ENST00000424443 DPY19L2Q6NUT2 758 aa31.55■■■□□ 2.64
TSPAN3-203ENST00000424443 IL15P40933 162 aaPredicted RBP31.54■■■□□ 2.64
TSPAN3-203ENST00000424443 EIF6P56537 245 aaKnown RBP31.54■■■□□ 2.64
TSPAN3-203ENST00000424443 SSH3Q8TE77 659 aa31.54■■■□□ 2.64
TSPAN3-203ENST00000424443 MED23Q9ULK4 1368 aa31.53■■■□□ 2.64
TSPAN3-203ENST00000424443 RPAP2Q8IXW5 612 aaPredicted RBP31.53■■■□□ 2.64
TSPAN3-203ENST00000424443 CRBNQ96SW2 442 aa31.53■■■□□ 2.64
TSPAN3-203ENST00000424443 WTIPA6NIX2 430 aaPredicted RBP31.52■■■□□ 2.64
TSPAN3-203ENST00000424443 POLA2Q14181 598 aa31.52■■■□□ 2.64
TSPAN3-203ENST00000424443 ZNRF3Q9ULT6 936 aa31.52■■■□□ 2.64
TSPAN3-203ENST00000424443 FZD9O00144 591 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 PDE8BO95263 885 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 G3BP1Q13283 466 aaKnown RBP eCLIP31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 UBE4AQ14139 1066 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 DOK7Q18PE1 504 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 ATG9AQ7Z3C6 839 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 DBNDD1Q9H9R9 158 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 CEP126Q9P2H0 1117 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 A0A1B0GUL6 1792 aa31.51■■■□□ 2.63
TSPAN3-203ENST00000424443 HMMRO75330 724 aa31.5■■■□□ 2.63
TSPAN3-203ENST00000424443 ZNF526Q8TF50 670 aaPredicted RBP31.5■■■□□ 2.63
TSPAN3-203ENST00000424443 KDM2BQ8NHM5 1336 aa31.5■■■□□ 2.63
TSPAN3-203ENST00000424443 SNAP23O00161 211 aa31.49■■■□□ 2.63
TSPAN3-203ENST00000424443 COL4A5P29400 1685 aa31.49■■■□□ 2.63
TSPAN3-203ENST00000424443 ECE2O60344 883 aa31.49■■■□□ 2.63
TSPAN3-203ENST00000424443 OS9Q13438 667 aaPredicted RBP31.49■■■□□ 2.63
TSPAN3-203ENST00000424443 GLTPD2A6NH11 291 aa31.48■■■□□ 2.63
TSPAN3-203ENST00000424443 SURF6O75683 361 aaKnown RBP31.47■■■□□ 2.63
TSPAN3-203ENST00000424443 VGLL2Q8N8G2 317 aa31.47■■■□□ 2.63
TSPAN3-203ENST00000424443 PUM3Q15397 648 aaKnown RBP31.46■■■□□ 2.63
TSPAN3-203ENST00000424443 ZNF541Q9H0D2 1346 aa31.45■■■□□ 2.62
TSPAN3-203ENST00000424443 KLRK1P26718 216 aa31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 C15orf52Q6ZUT6 534 aaKnown RBP31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 ZNF804AQ7Z570 1209 aa31.44■■■□□ 2.62
TSPAN3-203ENST00000424443 TXNRD3Q86VQ6 643 aa31.44■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms