RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 NSFL1CQ9UNZ2 370 aaKnown RBP23.16■■□□□ 1.3
HDAC6-205ENST00000423941 LRRFIP2Q9Y608 721 aaKnown RBP23.16■■□□□ 1.3
HDAC6-205ENST00000423941 A0A1B0GUL6 1792 aa23.16■■□□□ 1.3
HDAC6-205ENST00000423941 MTX1Q13505 466 aa23.15■■□□□ 1.3
HDAC6-205ENST00000423941 PDE3AQ14432 1141 aa23.15■■□□□ 1.3
HDAC6-205ENST00000423941 TBC1D16Q8TBP0 767 aa23.15■■□□□ 1.3
HDAC6-205ENST00000423941 CHMP3Q9Y3E7 222 aa23.15■■□□□ 1.3
HDAC6-205ENST00000423941 XDHP47989 1333 aa23.14■■□□□ 1.3
HDAC6-205ENST00000423941 KIAA2012Q0VF49 1180 aa23.14■■□□□ 1.29
HDAC6-205ENST00000423941 ZNF594Q96JF6 807 aaPredicted RBP23.14■■□□□ 1.29
HDAC6-205ENST00000423941 MPHOSPH8Q99549 860 aa23.14■■□□□ 1.29
HDAC6-205ENST00000423941 FZD9O00144 591 aa23.13■■□□□ 1.29
HDAC6-205ENST00000423941 RIPOR2Q9Y4F9 1068 aa23.13■■□□□ 1.29
HDAC6-205ENST00000423941 LDHAL6AQ6ZMR3 332 aa23.12■■□□□ 1.29
HDAC6-205ENST00000423941 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
HDAC6-205ENST00000423941 ZNF784Q8NCA9 323 aaPredicted RBP23.12■■□□□ 1.29
HDAC6-205ENST00000423941 GNAI2P04899 355 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 ATP2B4P23634 1241 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 PTPN12Q05209 780 aaKnown RBP23.11■■□□□ 1.29
HDAC6-205ENST00000423941 CHRNDQ07001 517 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 MVPQ14764 893 aaKnown RBP23.11■■□□□ 1.29
HDAC6-205ENST00000423941 ITPRIPQ8IWB1 547 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 ANKRD2Q9GZV1 360 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 ANKIB1Q9P2G1 1089 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 GGA1Q9UJY5 639 aa23.11■■□□□ 1.29
HDAC6-205ENST00000423941 WTIPA6NIX2 430 aaPredicted RBP23.1■■□□□ 1.29
HDAC6-205ENST00000423941 AOC3Q16853 763 aa23.1■■□□□ 1.29
HDAC6-205ENST00000423941 WASHC4Q2M389 1173 aa23.1■■□□□ 1.29
HDAC6-205ENST00000423941 PUS3Q9BZE2 481 aaKnown RBP23.1■■□□□ 1.29
HDAC6-205ENST00000423941 LEMD3Q9Y2U8 911 aa23.1■■□□□ 1.29
HDAC6-205ENST00000423941 GLTPD2A6NH11 291 aa23.09■■□□□ 1.29
HDAC6-205ENST00000423941 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
HDAC6-205ENST00000423941 C20orf194Q5TEA3 1177 aa23.09■■□□□ 1.29
HDAC6-205ENST00000423941 LARGE2Q8N3Y3 721 aa23.09■■□□□ 1.29
HDAC6-205ENST00000423941 FBXO3Q9UK99 471 aa23.09■■□□□ 1.29
HDAC6-205ENST00000423941 C6orf229H3BNL8 230 aa23.08■■□□□ 1.29
HDAC6-205ENST00000423941 UFL1O94874 794 aa23.08■■□□□ 1.29
HDAC6-205ENST00000423941 JDP2Q8WYK2 163 aa23.08■■□□□ 1.29
HDAC6-205ENST00000423941 EYA3Q99504 573 aa23.08■■□□□ 1.29
HDAC6-205ENST00000423941 IRS2Q9Y4H2 1338 aa23.08■■□□□ 1.28
HDAC6-205ENST00000423941 TAF7LQ5H9L4 462 aa23.07■■□□□ 1.28
HDAC6-205ENST00000423941 KLHDC4Q8TBB5 520 aa23.07■■□□□ 1.28
HDAC6-205ENST00000423941 COPRSQ9NQ92 184 aa23.07■■□□□ 1.28
HDAC6-205ENST00000423941 DDX19BQ9UMR2 479 aa23.07■■□□□ 1.28
HDAC6-205ENST00000423941 COG6Q9Y2V7 657 aa23.07■■□□□ 1.28
HDAC6-205ENST00000423941 LRRC24Q50LG9 513 aa23.06■■□□□ 1.28
HDAC6-205ENST00000423941 C15orf52Q6ZUT6 534 aaKnown RBP23.06■■□□□ 1.28
HDAC6-205ENST00000423941 CNNM1Q9NRU3 951 aa23.06■■□□□ 1.28
HDAC6-205ENST00000423941 ZBTB40Q9NUA8 1239 aa23.06■■□□□ 1.28
HDAC6-205ENST00000423941 ZNRF3Q9ULT6 936 aa23.06■■□□□ 1.28
HDAC6-205ENST00000423941 MED23Q9ULK4 1368 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 DPY19L2Q6NUT2 758 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 ATG9AQ7Z3C6 839 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 NIM1KQ8IY84 436 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 VGLL2Q8N8G2 317 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 GPR101Q96P66 508 aaPredicted RBP23.05■■□□□ 1.28
HDAC6-205ENST00000423941 ZC3H12CQ9C0D7 883 aaKnown RBP23.05■■□□□ 1.28
HDAC6-205ENST00000423941 ZNF804BA4D1E1 1349 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 MROH5Q6ZUA9 1318 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 WDR90Q96KV7 1748 aa23.05■■□□□ 1.28
HDAC6-205ENST00000423941 EYA2O00167 538 aa23.04■■□□□ 1.28
HDAC6-205ENST00000423941 CIAO1O76071 339 aa23.04■■□□□ 1.28
HDAC6-205ENST00000423941 RRP1P56182 461 aaKnown RBP23.04■■□□□ 1.28
HDAC6-205ENST00000423941 ATP8B2P98198 1209 aa23.04■■□□□ 1.28
HDAC6-205ENST00000423941 POLA2Q14181 598 aa23.04■■□□□ 1.28
HDAC6-205ENST00000423941 HELBQ8NG08 1087 aaPredicted RBP23.04■■□□□ 1.28
HDAC6-205ENST00000423941 ZNF541Q9H0D2 1346 aa23.04■■□□□ 1.28
HDAC6-205ENST00000423941 PNMA6EA0A0J9YXQ4 647 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 YDJCA8MPS7 323 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 SRGAP3O43295 1099 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 TAF5LO75529 589 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 TXNRD3Q86VQ6 643 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 SSH3Q8TE77 659 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 KDM2BQ8NHM5 1336 aa23.03■■□□□ 1.28
HDAC6-205ENST00000423941 SCN9AQ15858 1988 aa23.02■■□□□ 1.28
HDAC6-205ENST00000423941 POTECB2RU33 542 aa23.02■■□□□ 1.28
HDAC6-205ENST00000423941 RIMBP2O15034 1052 aa23.02■■□□□ 1.28
HDAC6-205ENST00000423941 UBE4AQ14139 1066 aa23.02■■□□□ 1.28
HDAC6-205ENST00000423941 PSME4Q14997 1843 aa23.02■■□□□ 1.28
HDAC6-205ENST00000423941 SNAP23O00161 211 aa23.01■■□□□ 1.27
HDAC6-205ENST00000423941 DDNO94850 711 aaPredicted RBP23.01■■□□□ 1.27
HDAC6-205ENST00000423941 PDE8BO95263 885 aa23.01■■□□□ 1.27
HDAC6-205ENST00000423941 CXCL9Q07325 125 aa23.01■■□□□ 1.27
HDAC6-205ENST00000423941 GPC2Q8N158 579 aa23.01■■□□□ 1.27
HDAC6-205ENST00000423941 L3MBTL3Q96JM7 780 aaPredicted RBP23.01■■□□□ 1.27
HDAC6-205ENST00000423941 CHMP4BQ9H444 224 aaKnown RBP23.01■■□□□ 1.27
HDAC6-205ENST00000423941 EIF6P56537 245 aaKnown RBP23■■□□□ 1.27
HDAC6-205ENST00000423941 C1orf115Q9H7X2 142 aa23■■□□□ 1.27
HDAC6-205ENST00000423941 GPBP1L1Q9HC44 474 aaPredicted RBP23■■□□□ 1.27
HDAC6-205ENST00000423941 PA2G4Q9UQ80 394 aaKnown RBP23■■□□□ 1.27
HDAC6-205ENST00000423941 ZNF646O15015 1829 aaPredicted RBP22.99■■□□□ 1.27
HDAC6-205ENST00000423941 KLRK1P26718 216 aa22.99■■□□□ 1.27
HDAC6-205ENST00000423941 CEP85Q6P2H3 762 aa22.99■■□□□ 1.27
HDAC6-205ENST00000423941 DBNDD1Q9H9R9 158 aa22.99■■□□□ 1.27
HDAC6-205ENST00000423941 SCN4AP35499 1836 aa22.98■■□□□ 1.27
HDAC6-205ENST00000423941 ECE2O60344 883 aa22.98■■□□□ 1.27
HDAC6-205ENST00000423941 FGFR2P21802 821 aa22.98■■□□□ 1.27
HDAC6-205ENST00000423941 DOK7Q18PE1 504 aa22.98■■□□□ 1.27
HDAC6-205ENST00000423941 PODNQ7Z5L7 613 aa22.98■■□□□ 1.27
HDAC6-205ENST00000423941 ZNF526Q8TF50 670 aaPredicted RBP22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms