RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 PODXL2Q9NZ53 605 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 RCAN3Q9UKA8 241 aa20.83■□□□□ 0.93
SEC22C-206ENST00000420163 WDR90Q96KV7 1748 aa20.83■□□□□ 0.92
SEC22C-206ENST00000420163 WTIPA6NIX2 430 aaPredicted RBP20.82■□□□□ 0.92
SEC22C-206ENST00000420163 UBTFL1P0CB47 393 aaPredicted RBP20.82■□□□□ 0.92
SEC22C-206ENST00000420163 SCN9AQ15858 1988 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 GLTPD2A6NH11 291 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 C6orf229H3BNL8 230 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 KIAA2012Q0VF49 1180 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 CCDC57Q2TAC2 916 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 ANKIB1Q9P2G1 1089 aa20.81■□□□□ 0.92
SEC22C-206ENST00000420163 XDHP47989 1333 aa20.8■□□□□ 0.92
SEC22C-206ENST00000420163 FZD9O00144 591 aa20.8■□□□□ 0.92
SEC22C-206ENST00000420163 UFL1O94874 794 aa20.8■□□□□ 0.92
SEC22C-206ENST00000420163 MPHOSPH8Q99549 860 aa20.8■□□□□ 0.92
SEC22C-206ENST00000420163 LRRFIP2Q9Y608 721 aaKnown RBP20.8■□□□□ 0.92
SEC22C-206ENST00000420163 KDM2BQ8NHM5 1336 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 RIMBP2O15034 1052 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 DDNO94850 711 aaPredicted RBP20.79■□□□□ 0.92
SEC22C-206ENST00000420163 NIM1KQ8IY84 436 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 DZIP1LQ8IYY4 767 aaKnown RBP20.79■□□□□ 0.92
SEC22C-206ENST00000420163 JDP2Q8WYK2 163 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 VPS33BQ9H267 617 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 GGA1Q9UJY5 639 aa20.79■□□□□ 0.92
SEC22C-206ENST00000420163 PSME4Q14997 1843 aa20.78■□□□□ 0.92
SEC22C-206ENST00000420163 KIF3CO14782 793 aa20.78■□□□□ 0.92
SEC22C-206ENST00000420163 WASHC4Q2M389 1173 aa20.78■□□□□ 0.92
SEC22C-206ENST00000420163 FTSJ3Q8IY81 847 aaKnown RBP20.78■□□□□ 0.92
SEC22C-206ENST00000420163 PUS3Q9BZE2 481 aaKnown RBP20.78■□□□□ 0.92
SEC22C-206ENST00000420163 PLIN1O60240 522 aa20.77■□□□□ 0.92
SEC22C-206ENST00000420163 CHRNDQ07001 517 aa20.77■□□□□ 0.92
SEC22C-206ENST00000420163 TAF7LQ5H9L4 462 aa20.77■□□□□ 0.92
SEC22C-206ENST00000420163 HELBQ8NG08 1087 aaPredicted RBP20.77■□□□□ 0.92
SEC22C-206ENST00000420163 KLHDC4Q8TBB5 520 aa20.77■□□□□ 0.92
SEC22C-206ENST00000420163 PANK1Q8TE04 598 aa20.77■□□□□ 0.92
SEC22C-206ENST00000420163 SCN4AP35499 1836 aa20.76■□□□□ 0.91
SEC22C-206ENST00000420163 RFX5P48382 616 aaPredicted RBP20.76■□□□□ 0.91
SEC22C-206ENST00000420163 LDHAL6AQ6ZMR3 332 aa20.76■□□□□ 0.91
SEC22C-206ENST00000420163 RRAGCQ9HB90 399 aa20.76■□□□□ 0.91
SEC22C-206ENST00000420163 ZNF646O15015 1829 aaPredicted RBP20.76■□□□□ 0.91
SEC22C-206ENST00000420163 YDJCA8MPS7 323 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 POTECB2RU33 542 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 SNAP23O00161 211 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 GNAI3P08754 354 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 ATP2B4P23634 1241 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 DOK7Q18PE1 504 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 DPY19L2Q6NUT2 758 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 ITPRIPQ8IWB1 547 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 EYA3Q99504 573 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 DBNDD1Q9H9R9 158 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 ZNRF3Q9ULT6 936 aa20.75■□□□□ 0.91
SEC22C-206ENST00000420163 TAF5LO75529 589 aa20.74■□□□□ 0.91
SEC22C-206ENST00000420163 KLRK1P26718 216 aa20.74■□□□□ 0.91
SEC22C-206ENST00000420163 EIF6P56537 245 aaKnown RBP20.74■□□□□ 0.91
SEC22C-206ENST00000420163 ANKRD2Q9GZV1 360 aa20.74■□□□□ 0.91
SEC22C-206ENST00000420163 CNNM1Q9NRU3 951 aa20.74■□□□□ 0.91
SEC22C-206ENST00000420163 MED23Q9ULK4 1368 aa20.73■□□□□ 0.91
SEC22C-206ENST00000420163 CXCL9Q07325 125 aa20.73■□□□□ 0.91
SEC22C-206ENST00000420163 LRRC24Q50LG9 513 aa20.73■□□□□ 0.91
SEC22C-206ENST00000420163 TXNRD3Q86VQ6 643 aa20.73■□□□□ 0.91
SEC22C-206ENST00000420163 ZC3H12CQ9C0D7 883 aaKnown RBP20.73■□□□□ 0.91
SEC22C-206ENST00000420163 ZNF804BA4D1E1 1349 aa20.73■□□□□ 0.91
SEC22C-206ENST00000420163 ECE2O60344 883 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 PTPN12Q05209 780 aaKnown RBP20.72■□□□□ 0.91
SEC22C-206ENST00000420163 KCNQ5Q9NR82 932 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 LEMD3Q9Y2U8 911 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 RIPOR2Q9Y4F9 1068 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 GJA3Q9Y6H8 435 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 IRS2Q9Y4H2 1338 aa20.72■□□□□ 0.91
SEC22C-206ENST00000420163 RAD17O75943 681 aa20.71■□□□□ 0.91
SEC22C-206ENST00000420163 GPC2Q8N158 579 aa20.71■□□□□ 0.91
SEC22C-206ENST00000420163 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
SEC22C-206ENST00000420163 C1orf115Q9H7X2 142 aa20.71■□□□□ 0.91
SEC22C-206ENST00000420163 HDAC5Q9UQL6 1122 aa20.71■□□□□ 0.91
SEC22C-206ENST00000420163 ZBTB7BO15156 539 aaPredicted RBP20.7■□□□□ 0.9
SEC22C-206ENST00000420163 GNAI2P04899 355 aa20.7■□□□□ 0.9
SEC22C-206ENST00000420163 C20orf194Q5TEA3 1177 aa20.7■□□□□ 0.9
SEC22C-206ENST00000420163 MTX1Q13505 466 aa20.69■□□□□ 0.9
SEC22C-206ENST00000420163 PA2G4Q9UQ80 394 aaKnown RBP20.69■□□□□ 0.9
SEC22C-206ENST00000420163 VEGFAP15692 232 aaPredicted RBP20.68■□□□□ 0.9
SEC22C-206ENST00000420163 KCNJ4P48050 445 aa20.68■□□□□ 0.9
SEC22C-206ENST00000420163 CIAPIN1Q6FI81 312 aa20.68■□□□□ 0.9
SEC22C-206ENST00000420163 COG6Q9Y2V7 657 aa20.68■□□□□ 0.9
SEC22C-206ENST00000420163 PNMA6EA0A0J9YXQ4 647 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 EYA2O00167 538 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 SRGAP3O43295 1099 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 SCNN1DP51172 638 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 MVPQ14764 893 aaKnown RBP20.67■□□□□ 0.9
SEC22C-206ENST00000420163 ATG9AQ7Z3C6 839 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 VGLL2Q8N8G2 317 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 SIL1Q9H173 461 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 MROH5Q6ZUA9 1318 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 ADAMTSL1Q8N6G6 1762 aa20.67■□□□□ 0.9
SEC22C-206ENST00000420163 PSMD14O00487 310 aa20.66■□□□□ 0.9
SEC22C-206ENST00000420163 MS4A1P11836 297 aa20.66■□□□□ 0.9
SEC22C-206ENST00000420163 METTL24Q5JXM2 366 aa20.66■□□□□ 0.9
SEC22C-206ENST00000420163 G3V3G9 751 aa20.65■□□□□ 0.9
SEC22C-206ENST00000420163 GMPSP49915 693 aaPredicted RBP20.65■□□□□ 0.9
SEC22C-206ENST00000420163 DCAF8Q5TAQ9 597 aa20.65■□□□□ 0.9
SEC22C-206ENST00000420163 TAF1DQ9H5J8 278 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms