RNA–Protein interactions for RNA: ENST00000419601.1

NOD1-204, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-204ENST00000419601 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 RAD17O75943 681 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 UFL1O94874 794 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 CSF1RP07333 972 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 EPS15P42566 896 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 TRMT2AQ8IZ69 625 aaKnown RBP20.18■□□□□ 0.82
NOD1-204ENST00000419601 MRPL50Q8N5N7 158 aaKnown RBP20.18■□□□□ 0.82
NOD1-204ENST00000419601 ZC3H12CQ9C0D7 883 aaKnown RBP20.18■□□□□ 0.82
NOD1-204ENST00000419601 BSDC1Q9NW68 430 aaPredicted RBP20.18■□□□□ 0.82
NOD1-204ENST00000419601 CLEC11AQ9Y240 323 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 XDHP47989 1333 aa20.18■□□□□ 0.82
NOD1-204ENST00000419601 YDJCA8MPS7 323 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 SLC4A10Q6U841 1118 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 SRCIN1Q9C0H9 1055 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 DBNDD1Q9H9R9 158 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 GPRC5DQ9NZD1 345 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 SPEF2Q9C093 1822 aa20.17■□□□□ 0.82
NOD1-204ENST00000419601 GRM8O00222 908 aa20.16■□□□□ 0.82
NOD1-204ENST00000419601 ITGA6P23229 1130 aa20.16■□□□□ 0.82
NOD1-204ENST00000419601 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
NOD1-204ENST00000419601 GMPSP49915 693 aaPredicted RBP20.16■□□□□ 0.82
NOD1-204ENST00000419601 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
NOD1-204ENST00000419601 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
NOD1-204ENST00000419601 GPR101Q96P66 508 aaPredicted RBP20.16■□□□□ 0.82
NOD1-204ENST00000419601 PTPRCP08575 1304 aa20.16■□□□□ 0.82
NOD1-204ENST00000419601 ECE2O60344 883 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 ATP2B4P23634 1241 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 ALDH1L2Q3SY69 923 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 USP50Q70EL3 339 aaPredicted RBP20.15■□□□□ 0.82
NOD1-204ENST00000419601 TNS4Q8IZW8 715 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 MIER1Q8N108 512 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 BCL2L13Q9BXK5 485 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
NOD1-204ENST00000419601 MINPP1Q9UNW1 487 aa20.15■□□□□ 0.82
NOD1-204ENST00000419601 CT47B1P0C2W7 299 aaPredicted RBP20.14■□□□□ 0.81
NOD1-204ENST00000419601 FOXO4P98177 505 aa20.14■□□□□ 0.81
NOD1-204ENST00000419601 DOK7Q18PE1 504 aa20.14■□□□□ 0.81
NOD1-204ENST00000419601 ADARB2Q9NS39 739 aaKnown RBP20.14■□□□□ 0.81
NOD1-204ENST00000419601 PASKQ96RG2 1323 aa20.13■□□□□ 0.81
NOD1-204ENST00000419601 G3V3G9 751 aa20.13■□□□□ 0.81
NOD1-204ENST00000419601 DCAF8Q5TAQ9 597 aa20.13■□□□□ 0.81
NOD1-204ENST00000419601 MPHOSPH8Q99549 860 aa20.13■□□□□ 0.81
NOD1-204ENST00000419601 ANKRD18BA2A2Z9 1011 aa20.12■□□□□ 0.81
NOD1-204ENST00000419601 PSMD14O00487 310 aa20.12■□□□□ 0.81
NOD1-204ENST00000419601 ITGBL1O95965 494 aaPredicted RBP20.12■□□□□ 0.81
NOD1-204ENST00000419601 MAP1SQ66K74 1059 aaPredicted RBP20.12■□□□□ 0.81
NOD1-204ENST00000419601 CNTROBQ8N137 903 aa20.12■□□□□ 0.81
NOD1-204ENST00000419601 CCT4P50991 539 aaKnown RBP20.11■□□□□ 0.81
NOD1-204ENST00000419601 IFIT5Q13325 482 aaKnown RBP20.11■□□□□ 0.81
NOD1-204ENST00000419601 ANKRD2Q9GZV1 360 aa20.11■□□□□ 0.81
NOD1-204ENST00000419601 CREBZFQ9NS37 354 aa20.11■□□□□ 0.81
NOD1-204ENST00000419601 SMC4Q9NTJ3 1288 aa20.11■□□□□ 0.81
NOD1-204ENST00000419601 MED23Q9ULK4 1368 aa20.1■□□□□ 0.81
NOD1-204ENST00000419601 RPS12P25398 132 aaKnown RBP20.1■□□□□ 0.81
NOD1-204ENST00000419601 LMBR1LQ6UX01 489 aa20.1■□□□□ 0.81
NOD1-204ENST00000419601 DPF2Q92785 391 aa20.1■□□□□ 0.81
NOD1-204ENST00000419601 LEMD3Q9Y2U8 911 aa20.1■□□□□ 0.81
NOD1-204ENST00000419601 CHMP3Q9Y3E7 222 aa20.1■□□□□ 0.81
NOD1-204ENST00000419601 UTYO14607 1347 aa20.09■□□□□ 0.81
NOD1-204ENST00000419601 H7C1D1 291 aa20.09■□□□□ 0.81
NOD1-204ENST00000419601 HSPA1AP0DMV8 641 aaKnown RBP20.09■□□□□ 0.81
NOD1-204ENST00000419601 HSPA1BP0DMV9 641 aaKnown RBP20.09■□□□□ 0.81
NOD1-204ENST00000419601 EPHA10Q5JZY3 1008 aa20.09■□□□□ 0.81
NOD1-204ENST00000419601 KCNQ5Q9NR82 932 aa20.09■□□□□ 0.81
NOD1-204ENST00000419601 CNOT7Q9UIV1 285 aaKnown RBP20.09■□□□□ 0.81
NOD1-204ENST00000419601 ZBTB12Q9Y330 459 aaPredicted RBP20.09■□□□□ 0.81
NOD1-204ENST00000419601 SCN9AQ15858 1988 aa20.08■□□□□ 0.81
NOD1-204ENST00000419601 CCDC57Q2TAC2 916 aa20.08■□□□□ 0.81
NOD1-204ENST00000419601 MICALL2Q8IY33 904 aa20.08■□□□□ 0.81
NOD1-204ENST00000419601 WTIPA6NIX2 430 aaPredicted RBP20.07■□□□□ 0.8
NOD1-204ENST00000419601 VIL1P09327 827 aaKnown RBP20.07■□□□□ 0.8
NOD1-204ENST00000419601 NBPF7P0C2Y1 421 aaPredicted RBP20.07■□□□□ 0.8
NOD1-204ENST00000419601 PODNQ7Z5L7 613 aa20.07■□□□□ 0.8
NOD1-204ENST00000419601 PSME4Q14997 1843 aa20.06■□□□□ 0.8
NOD1-204ENST00000419601 TMEM88BA6NKF7 163 aa20.06■□□□□ 0.8
NOD1-204ENST00000419601 CHRNDQ07001 517 aa20.06■□□□□ 0.8
NOD1-204ENST00000419601 TAF7LQ5H9L4 462 aa20.06■□□□□ 0.8
NOD1-204ENST00000419601 ZC3H15Q8WU90 426 aaKnown RBP20.06■□□□□ 0.8
NOD1-204ENST00000419601 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
NOD1-204ENST00000419601 ZNF804BA4D1E1 1349 aa20.05■□□□□ 0.8
NOD1-204ENST00000419601 SHTN1A0MZ66 631 aa20.05■□□□□ 0.8
NOD1-204ENST00000419601 KCNJ4P48050 445 aa20.05■□□□□ 0.8
NOD1-204ENST00000419601 BRPF1P55201 1214 aaPredicted RBP20.05■□□□□ 0.8
NOD1-204ENST00000419601 PGAP2Q9UHJ9 254 aa20.05■□□□□ 0.8
NOD1-204ENST00000419601 ZNF609O15014 1411 aa20.04■□□□□ 0.8
NOD1-204ENST00000419601 HIRAP54198 1017 aaPredicted RBP20.04■□□□□ 0.8
NOD1-204ENST00000419601 TRPM4Q8TD43 1214 aa20.04■□□□□ 0.8
NOD1-204ENST00000419601 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
NOD1-204ENST00000419601 COA1Q9GZY4 146 aa20.04■□□□□ 0.8
NOD1-204ENST00000419601 USP17L3A6NCW0 530 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 USP17L4A6NCW7 530 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 RSBN1LQ6PCB5 846 aaPredicted RBP20.03■□□□□ 0.8
NOD1-204ENST00000419601 LDHAL6AQ6ZMR3 332 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 USP17L1Q7RTZ2 530 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 AGBL3Q8NEM8 1001 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 ZNF594Q96JF6 807 aaPredicted RBP20.03■□□□□ 0.8
NOD1-204ENST00000419601 BICC1Q9H694 974 aaKnown RBP20.03■□□□□ 0.8
NOD1-204ENST00000419601 A0A1B0GUL6 1792 aa20.03■□□□□ 0.8
NOD1-204ENST00000419601 RARSP54136 660 aaKnown RBP20.02■□□□□ 0.8
NOD1-204ENST00000419601 HNRNPUQ00839 825 aaKnown RBP eCLIP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms