RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 TBC1D16Q8TBP0 767 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 PODXL2Q9NZ53 605 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 C9orf78Q9NZ63 289 aaPredicted RBP16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 POLLQ9UGP5 575 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 GGA1Q9UJY5 639 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 XDHP47989 1333 aa16.12■□□□□ 0.17
HMGN1P4-201ENST00000419500 G3V3G9 751 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 RIMBP2O15034 1052 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 CT47B1P0C2W7 299 aaPredicted RBP16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 POTEIP0CG38 1075 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 POTEJP0CG39 1038 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 ITGA6P23229 1130 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 FAM161AQ3B820 660 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 DCAF8Q5TAQ9 597 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 CIAPIN1Q6FI81 312 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 LDHDQ86WU2 507 aa16.11■□□□□ 0.17
HMGN1P4-201ENST00000419500 RAD17O75943 681 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 SCNN1DP51172 638 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 CXCL9Q07325 125 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 TNIP1Q15025 636 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 TRMT2AQ8IZ69 625 aaKnown RBP16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 GPR101Q96P66 508 aaPredicted RBP16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 MPHOSPH8Q99549 860 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 ZC3H12CQ9C0D7 883 aaKnown RBP16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 DBNDD1Q9H9R9 158 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 BSDC1Q9NW68 430 aaPredicted RBP16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 CHMP3Q9Y3E7 222 aa16.1■□□□□ 0.17
HMGN1P4-201ENST00000419500 CSF1RP07333 972 aa16.09■□□□□ 0.17
HMGN1P4-201ENST00000419500 HNRNPUQ00839 825 aaKnown RBP eCLIP16.09■□□□□ 0.17
HMGN1P4-201ENST00000419500 ANKRD18BA2A2Z9 1011 aa16.08■□□□□ 0.16
HMGN1P4-201ENST00000419500 ECE2O60344 883 aa16.08■□□□□ 0.16
HMGN1P4-201ENST00000419500 ATP2B4P23634 1241 aa16.08■□□□□ 0.16
HMGN1P4-201ENST00000419500 IFIT5Q13325 482 aaKnown RBP16.08■□□□□ 0.16
HMGN1P4-201ENST00000419500 ADAMTSL1Q8N6G6 1762 aa16.08■□□□□ 0.16
HMGN1P4-201ENST00000419500 YDJCA8MPS7 323 aa16.07■□□□□ 0.16
HMGN1P4-201ENST00000419500 GMPSP49915 693 aaPredicted RBP16.07■□□□□ 0.16
HMGN1P4-201ENST00000419500 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
HMGN1P4-201ENST00000419500 GPRC5DQ9NZD1 345 aa16.07■□□□□ 0.16
HMGN1P4-201ENST00000419500 MINPP1Q9UNW1 487 aa16.07■□□□□ 0.16
HMGN1P4-201ENST00000419500 EPS15P42566 896 aa16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 FOXO4P98177 505 aa16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 CCDC57Q2TAC2 916 aa16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 TAF7LQ5H9L4 462 aa16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 LMBR1LQ6UX01 489 aa16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 USP50Q70EL3 339 aaPredicted RBP16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 ADARB2Q9NS39 739 aaKnown RBP16.06■□□□□ 0.16
HMGN1P4-201ENST00000419500 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
HMGN1P4-201ENST00000419500 KIF16BQ96L93 1317 aa16.05■□□□□ 0.16
HMGN1P4-201ENST00000419500 CCT4P50991 539 aaKnown RBP16.05■□□□□ 0.16
HMGN1P4-201ENST00000419500 HTRA3P83110 453 aa16.05■□□□□ 0.16
HMGN1P4-201ENST00000419500 ANKRD2Q9GZV1 360 aa16.05■□□□□ 0.16
HMGN1P4-201ENST00000419500 PSMD14O00487 310 aa16.04■□□□□ 0.16
HMGN1P4-201ENST00000419500 KCNJ4P48050 445 aa16.04■□□□□ 0.16
HMGN1P4-201ENST00000419500 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
HMGN1P4-201ENST00000419500 SUCLG2Q96I99 432 aa16.04■□□□□ 0.16
HMGN1P4-201ENST00000419500 UTYO14607 1347 aa16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 MAP1SQ66K74 1059 aaPredicted RBP16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 NOB1Q9ULX3 412 aaKnown RBP16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 LEMD3Q9Y2U8 911 aa16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 ZBTB12Q9Y330 459 aaPredicted RBP16.03■□□□□ 0.16
HMGN1P4-201ENST00000419500 ZNF804BA4D1E1 1349 aa16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 H7C1D1 291 aa16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 RPS12P25398 132 aaKnown RBP16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 RARSP54136 660 aaKnown RBP16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 CHRNDQ07001 517 aa16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 MICALL2Q8IY33 904 aa16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 CNTROBQ8N137 903 aa16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 API5Q9BZZ5 524 aaKnown RBP16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 CNOT7Q9UIV1 285 aaKnown RBP16.02■□□□□ 0.16
HMGN1P4-201ENST00000419500 LDHAL6AQ6ZMR3 332 aa16.01■□□□□ 0.15
HMGN1P4-201ENST00000419500 DPF2Q92785 391 aa16.01■□□□□ 0.15
HMGN1P4-201ENST00000419500 BICC1Q9H694 974 aaKnown RBP16.01■□□□□ 0.15
HMGN1P4-201ENST00000419500 KCNQ5Q9NR82 932 aa16.01■□□□□ 0.15
HMGN1P4-201ENST00000419500 CNNM1Q9NRU3 951 aa16.01■□□□□ 0.15
HMGN1P4-201ENST00000419500 A0A1B0GUL6 1792 aa16■□□□□ 0.15
HMGN1P4-201ENST00000419500 PASKQ96RG2 1323 aa16■□□□□ 0.15
HMGN1P4-201ENST00000419500 WTIPA6NIX2 430 aaPredicted RBP16■□□□□ 0.15
HMGN1P4-201ENST00000419500 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
HMGN1P4-201ENST00000419500 PODNQ7Z5L7 613 aa16■□□□□ 0.15
HMGN1P4-201ENST00000419500 CREBZFQ9NS37 354 aa16■□□□□ 0.15
HMGN1P4-201ENST00000419500 SCN9AQ15858 1988 aa16■□□□□ 0.15
HMGN1P4-201ENST00000419500 PSME4Q14997 1843 aa15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 ITGBL1O95965 494 aaPredicted RBP15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 VIL1P09327 827 aaKnown RBP15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 DNAJC5GQ8N7S2 189 aa15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 KLRG1Q96E93 195 aa15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 KAZALD1Q96I82 304 aa15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 ZNF594Q96JF6 807 aaPredicted RBP15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 COA1Q9GZY4 146 aa15.99■□□□□ 0.15
HMGN1P4-201ENST00000419500 ZBED9Q6R2W3 1325 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 SHTN1A0MZ66 631 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 USP17L3A6NCW0 530 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 USP17L4A6NCW7 530 aa15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 RABL6Q3YEC7 729 aaPredicted RBP15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 RSBN1LQ6PCB5 846 aaPredicted RBP15.98■□□□□ 0.15
HMGN1P4-201ENST00000419500 USP17L1Q7RTZ2 530 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms