RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NAT10Q9H0A0 1025 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 TMEM2Q9UHN6 1383 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 DIP2AQ14689 1571 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 PXDNLA1KZ92 1463 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 SURF6O75683 361 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 LMAN1P49257 510 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 FLIIQ13045 1269 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 RRS1Q15050 365 aaKnown RBP9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 NME9Q86XW9 330 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 CCDC34Q96HJ3 373 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 STK31Q9BXU1 1019 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 FUT8Q9BYC5 575 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 ARFGAP3Q9NP61 516 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 PARP3Q9Y6F1 533 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 FANCGO15287 622 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 IVLP07476 585 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 POLA2Q14181 598 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 CREB3L3Q68CJ9 461 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 SIRT1Q96EB6 747 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 NCAPGQ9BPX3 1015 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 USP44Q9H0E7 712 aa9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 ALDH8A1Q9H2A2 487 aaPredicted RBP9.35□□□□□ -0.91
HMGXB4-202ENST00000418170 GLRX3O76003 335 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 URI1O94763 535 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 PSMA5P28066 241 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 MAGEA9P43362 315 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 TMC6Q7Z403 805 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 JRKLQ9Y4A0 524 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 UBTFL1P0CB47 393 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 MYCBPQ99417 103 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 XPO4Q9C0E2 1151 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 ZSCAN16Q9H4T2 348 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 MIS18AQ9NYP9 233 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 RBM8AQ9Y5S9 174 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 A0A087WWV3 80 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 TTC31Q49AM3 519 aaPredicted RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 CCAR1Q8IX12 1150 aaKnown RBP9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 CHMP4CQ96CF2 233 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 ZRANB1Q9UGI0 708 aa9.34□□□□□ -0.91
HMGXB4-202ENST00000418170 LOC102724159A0A0B4J2E5 919 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 KINO60870 393 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 LTKP29376 864 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 COL9A3Q14050 684 aaPredicted RBP9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 PWP2Q15269 919 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 GOLPH3LQ9H4A5 285 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 RPS6KA5O75582 802 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 IFIT2P09913 472 aaKnown RBP9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 PSME1Q06323 249 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 LEKR1Q6ZMV7 388 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 CCDC73Q6ZRK6 1079 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 PPP1R42Q7Z4L9 355 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 PACS2Q86VP3 889 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 ENGASEQ8NFI3 743 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 TSPYL4Q9UJ04 414 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 TNRQ92752 1358 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 ROBO2Q9HCK4 1378 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 SMC2O95347 1197 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 PSEN1P49768 467 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 TOB2Q14106 344 aaPredicted RBP9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 BLOC1S2Q6QNY1 142 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 MAP4K1Q92918 833 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 EPC1Q9H2F5 836 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 IFNKQ9P0W0 207 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 RCOR1Q9UKL0 485 aa9.33□□□□□ -0.92
HMGXB4-202ENST00000418170 H3BQF6 201 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 FAM160A1Q05DH4 1040 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 RSRC2Q7L4I2 434 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 COG3Q96JB2 828 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 BPIFA3Q9BQP9 254 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 RPS6KB1P23443 525 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 ADD1P35611 737 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 EIF4A2Q14240 407 aaKnown RBP9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 TSGA10IPQ3SY00 556 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 BRF1Q92994 677 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 SLC27A2O14975 620 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 MLECQ14165 292 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 AEBP2Q6ZN18 517 aaPredicted RBP9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 RABGGTAQ92696 567 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 MAP2K7O14733 419 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 TCEANC2Q96MN5 208 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 MPHOSPH8Q99549 860 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 PARD6BQ9BYG5 372 aa9.32□□□□□ -0.92
HMGXB4-202ENST00000418170 CCDC151A5D8V7 595 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 ATP2B1P20020 1258 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 MAP3K9P80192 1104 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 CCDC30Q5VVM6 783 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 JAKMIP3Q5VZ66 844 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 SENP3Q9H4L4 574 aaPredicted RBP9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 NWD1Q149M9 1564 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 NPHP4O75161 1426 aaPredicted RBP9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 PLEKHG1Q9ULL1 1385 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 JAK2O60674 1132 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 LONRF2Q1L5Z9 754 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 H3BQV1 296 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 CEBPZQ03701 1054 aaKnown RBP9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 STK3Q13188 491 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 IFFO2Q5TF58 517 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 FCHSD1Q86WN1 690 aa9.31□□□□□ -0.92
HMGXB4-202ENST00000418170 DDX11Q96FC9 970 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms