RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 EPS15P42566 896 aa19.84■□□□□ 0.77
ITGB1-204ENST00000417122 SLC4A10Q6U841 1118 aa19.84■□□□□ 0.77
ITGB1-204ENST00000417122 ZC3H12CQ9C0D7 883 aaKnown RBP19.84■□□□□ 0.77
ITGB1-204ENST00000417122 DBNDD1Q9H9R9 158 aa19.84■□□□□ 0.77
ITGB1-204ENST00000417122 BSDC1Q9NW68 430 aaPredicted RBP19.84■□□□□ 0.77
ITGB1-204ENST00000417122 XDHP47989 1333 aa19.83■□□□□ 0.77
ITGB1-204ENST00000417122 CSF1RP07333 972 aa19.83■□□□□ 0.77
ITGB1-204ENST00000417122 ITGA6P23229 1130 aa19.83■□□□□ 0.77
ITGB1-204ENST00000417122 TRMT2AQ8IZ69 625 aaKnown RBP19.83■□□□□ 0.77
ITGB1-204ENST00000417122 GPRC5DQ9NZD1 345 aa19.83■□□□□ 0.77
ITGB1-204ENST00000417122 ECE2O60344 883 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 ALDH1L1O75891 902 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 IGHMBP2P38935 993 aaKnown RBP19.82■□□□□ 0.76
ITGB1-204ENST00000417122 GMPSP49915 693 aaPredicted RBP19.82■□□□□ 0.76
ITGB1-204ENST00000417122 DOK7Q18PE1 504 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 FAM161AQ3B820 660 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 SSH1Q8WYL5 1049 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 BCL2L13Q9BXK5 485 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 SRCIN1Q9C0H9 1055 aa19.82■□□□□ 0.76
ITGB1-204ENST00000417122 CEP350Q5VT06 3117 aa19.81■□□□□ 0.76
ITGB1-204ENST00000417122 GRM8O00222 908 aa19.81■□□□□ 0.76
ITGB1-204ENST00000417122 ATP2B4P23634 1241 aa19.81■□□□□ 0.76
ITGB1-204ENST00000417122 USP50Q70EL3 339 aaPredicted RBP19.81■□□□□ 0.76
ITGB1-204ENST00000417122 MIER1Q8N108 512 aa19.81■□□□□ 0.76
ITGB1-204ENST00000417122 C9orf78Q9NZ63 289 aaPredicted RBP19.81■□□□□ 0.76
ITGB1-204ENST00000417122 MINPP1Q9UNW1 487 aa19.81■□□□□ 0.76
ITGB1-204ENST00000417122 G3V3G9 751 aa19.8■□□□□ 0.76
ITGB1-204ENST00000417122 FOXO4P98177 505 aa19.8■□□□□ 0.76
ITGB1-204ENST00000417122 DCAF8Q5TAQ9 597 aa19.8■□□□□ 0.76
ITGB1-204ENST00000417122 MAP1SQ66K74 1059 aaPredicted RBP19.8■□□□□ 0.76
ITGB1-204ENST00000417122 ADARB2Q9NS39 739 aaKnown RBP19.8■□□□□ 0.76
ITGB1-204ENST00000417122 PTPRCP08575 1304 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 PASKQ96RG2 1323 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 ANKRD18BA2A2Z9 1011 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 PSMD14O00487 310 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 ITGBL1O95965 494 aaPredicted RBP19.79■□□□□ 0.76
ITGB1-204ENST00000417122 ALDH1L2Q3SY69 923 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 CNTROBQ8N137 903 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 KLRG1Q96E93 195 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 MPHOSPH8Q99549 860 aa19.79■□□□□ 0.76
ITGB1-204ENST00000417122 KCNQ5Q9NR82 932 aa19.78■□□□□ 0.76
ITGB1-204ENST00000417122 ZBTB12Q9Y330 459 aaPredicted RBP19.78■□□□□ 0.76
ITGB1-204ENST00000417122 CHMP3Q9Y3E7 222 aa19.78■□□□□ 0.76
ITGB1-204ENST00000417122 CT47B1P0C2W7 299 aaPredicted RBP19.77■□□□□ 0.76
ITGB1-204ENST00000417122 CCT4P50991 539 aaKnown RBP19.77■□□□□ 0.76
ITGB1-204ENST00000417122 IFIT5Q13325 482 aaKnown RBP19.77■□□□□ 0.76
ITGB1-204ENST00000417122 EPHA10Q5JZY3 1008 aa19.77■□□□□ 0.76
ITGB1-204ENST00000417122 CREBZFQ9NS37 354 aa19.77■□□□□ 0.76
ITGB1-204ENST00000417122 CNOT7Q9UIV1 285 aaKnown RBP19.77■□□□□ 0.76
ITGB1-204ENST00000417122 SCN9AQ15858 1988 aa19.77■□□□□ 0.75
ITGB1-204ENST00000417122 WTIPA6NIX2 430 aaPredicted RBP19.76■□□□□ 0.75
ITGB1-204ENST00000417122 LMBR1LQ6UX01 489 aa19.76■□□□□ 0.75
ITGB1-204ENST00000417122 DPF2Q92785 391 aa19.76■□□□□ 0.75
ITGB1-204ENST00000417122 SMC4Q9NTJ3 1288 aa19.76■□□□□ 0.75
ITGB1-204ENST00000417122 MED23Q9ULK4 1368 aa19.75■□□□□ 0.75
ITGB1-204ENST00000417122 MICALL2Q8IY33 904 aa19.75■□□□□ 0.75
ITGB1-204ENST00000417122 ANKRD2Q9GZV1 360 aa19.75■□□□□ 0.75
ITGB1-204ENST00000417122 LEMD3Q9Y2U8 911 aa19.75■□□□□ 0.75
ITGB1-204ENST00000417122 PSME4Q14997 1843 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 SHTN1A0MZ66 631 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 H7C1D1 291 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 VIL1P09327 827 aaKnown RBP19.74■□□□□ 0.75
ITGB1-204ENST00000417122 NBPF7P0C2Y1 421 aaPredicted RBP19.74■□□□□ 0.75
ITGB1-204ENST00000417122 RPS12P25398 132 aaKnown RBP19.74■□□□□ 0.75
ITGB1-204ENST00000417122 CHRNDQ07001 517 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 SUCLG2Q96I99 432 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 UTYO14607 1347 aa19.74■□□□□ 0.75
ITGB1-204ENST00000417122 TMEM88BA6NKF7 163 aa19.73■□□□□ 0.75
ITGB1-204ENST00000417122 CCDC57Q2TAC2 916 aa19.73■□□□□ 0.75
ITGB1-204ENST00000417122 PODNQ7Z5L7 613 aa19.73■□□□□ 0.75
ITGB1-204ENST00000417122 ZNF804BA4D1E1 1349 aa19.73■□□□□ 0.75
ITGB1-204ENST00000417122 HIRAP54198 1017 aaPredicted RBP19.72■□□□□ 0.75
ITGB1-204ENST00000417122 JMYQ8N9B5 988 aa19.72■□□□□ 0.75
ITGB1-204ENST00000417122 TRPM4Q8TD43 1214 aa19.72■□□□□ 0.75
ITGB1-204ENST00000417122 A0A1B0GUL6 1792 aa19.71■□□□□ 0.75
ITGB1-204ENST00000417122 TAF7LQ5H9L4 462 aa19.71■□□□□ 0.75
ITGB1-204ENST00000417122 ZC3H15Q8WU90 426 aaKnown RBP19.71■□□□□ 0.75
ITGB1-204ENST00000417122 KAZALD1Q96I82 304 aa19.71■□□□□ 0.75
ITGB1-204ENST00000417122 PGAP2Q9UHJ9 254 aa19.71■□□□□ 0.75
ITGB1-204ENST00000417122 KCNJ4P48050 445 aa19.7■□□□□ 0.74
ITGB1-204ENST00000417122 RSBN1LQ6PCB5 846 aaPredicted RBP19.7■□□□□ 0.74
ITGB1-204ENST00000417122 SAMD7Q7Z3H4 446 aa19.7■□□□□ 0.74
ITGB1-204ENST00000417122 TXNRD3Q86VQ6 643 aa19.7■□□□□ 0.74
ITGB1-204ENST00000417122 ZNF594Q96JF6 807 aaPredicted RBP19.7■□□□□ 0.74
ITGB1-204ENST00000417122 TRPM7Q96QT4 1865 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 USP17L3A6NCW0 530 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 USP17L4A6NCW7 530 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 TAF5LO75529 589 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 BRPF1P55201 1214 aaPredicted RBP19.69■□□□□ 0.74
ITGB1-204ENST00000417122 LDHAL6AQ6ZMR3 332 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 USP17L1Q7RTZ2 530 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 AGBL3Q8NEM8 1001 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 COA1Q9GZY4 146 aa19.69■□□□□ 0.74
ITGB1-204ENST00000417122 BICC1Q9H694 974 aaKnown RBP19.69■□□□□ 0.74
ITGB1-204ENST00000417122 MKRN1Q9UHC7 482 aaKnown RBP19.69■□□□□ 0.74
ITGB1-204ENST00000417122 NOB1Q9ULX3 412 aaKnown RBP19.69■□□□□ 0.74
ITGB1-204ENST00000417122 ZNF609O15014 1411 aa19.68■□□□□ 0.74
ITGB1-204ENST00000417122 TRAF5O00463 557 aa19.68■□□□□ 0.74
ITGB1-204ENST00000417122 KLRK1P26718 216 aa19.68■□□□□ 0.74
ITGB1-204ENST00000417122 RARSP54136 660 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms