RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 METTL22Q9BUU2 404 aaPredicted RBP19.14■□□□□ 0.65
RPS28-201ENST00000417088 PODXL2Q9NZ53 605 aa19.14■□□□□ 0.65
RPS28-201ENST00000417088 AOC2O75106 756 aa19.13■□□□□ 0.65
RPS28-201ENST00000417088 ZNF408Q9H9D4 720 aa19.13■□□□□ 0.65
RPS28-201ENST00000417088 CWC25Q9NXE8 425 aaPredicted RBP19.13■□□□□ 0.65
RPS28-201ENST00000417088 RTL9Q8NET4 1388 aa19.13■□□□□ 0.65
RPS28-201ENST00000417088 PDE8AO60658 829 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 EGFRP00533 1210 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 RPS12P25398 132 aaKnown RBP19.12■□□□□ 0.65
RPS28-201ENST00000417088 MAP2K2P36507 400 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 CCDC152Q4G0S7 254 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 TBC1D10BQ4KMP7 808 aaPredicted RBP19.12■□□□□ 0.65
RPS28-201ENST00000417088 USP48Q86UV5 1035 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 HHIPL1Q96JK4 782 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 CHMP4AQ9BY43 222 aa19.12■□□□□ 0.65
RPS28-201ENST00000417088 ZC3H12CQ9C0D7 883 aaKnown RBP19.12■□□□□ 0.65
RPS28-201ENST00000417088 DDX58O95786 925 aaKnown RBP19.11■□□□□ 0.65
RPS28-201ENST00000417088 CCDC184Q52MB2 194 aa19.11■□□□□ 0.65
RPS28-201ENST00000417088 DLK2Q6UY11 383 aa19.11■□□□□ 0.65
RPS28-201ENST00000417088 CCDC85AQ96PX6 553 aaPredicted RBP19.11■□□□□ 0.65
RPS28-201ENST00000417088 BEGAINQ9BUH8 593 aa19.11■□□□□ 0.65
RPS28-201ENST00000417088 MAP3K2Q9Y2U5 619 aa19.11■□□□□ 0.65
RPS28-201ENST00000417088 UFL1O94874 794 aa19.1■□□□□ 0.65
RPS28-201ENST00000417088 ANKIB1Q9P2G1 1089 aa19.1■□□□□ 0.65
RPS28-201ENST00000417088 GGA1Q9UJY5 639 aa19.1■□□□□ 0.65
RPS28-201ENST00000417088 IGKV5-2P06315 115 aa19.09■□□□□ 0.65
RPS28-201ENST00000417088 VIL1P09327 827 aaKnown RBP19.09■□□□□ 0.65
RPS28-201ENST00000417088 RBM26Q5T8P6 1007 aaKnown RBP19.09■□□□□ 0.65
RPS28-201ENST00000417088 KSR2Q6VAB6 950 aa19.09■□□□□ 0.65
RPS28-201ENST00000417088 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
RPS28-201ENST00000417088 PI4KAP2A4QPH2 592 aa19.08■□□□□ 0.64
RPS28-201ENST00000417088 KRT26Q7Z3Y9 468 aa19.08■□□□□ 0.64
RPS28-201ENST00000417088 ANKRD18AQ8IVF6 992 aa19.08■□□□□ 0.64
RPS28-201ENST00000417088 PI4KAP1Q8N8J0 262 aa19.08■□□□□ 0.64
RPS28-201ENST00000417088 SCN9AQ15858 1988 aa19.07■□□□□ 0.64
RPS28-201ENST00000417088 G3V3G9 751 aa19.07■□□□□ 0.64
RPS28-201ENST00000417088 CCDC27Q2M243 656 aa19.07■□□□□ 0.64
RPS28-201ENST00000417088 DCAF8Q5TAQ9 597 aa19.07■□□□□ 0.64
RPS28-201ENST00000417088 TSKSQ9UJT2 592 aa19.07■□□□□ 0.64
RPS28-201ENST00000417088 CTSWP56202 376 aa19.06■□□□□ 0.64
RPS28-201ENST00000417088 KIF4BQ2VIQ3 1234 aa19.06■□□□□ 0.64
RPS28-201ENST00000417088 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
RPS28-201ENST00000417088 DCPSQ96C86 337 aaKnown RBP19.06■□□□□ 0.64
RPS28-201ENST00000417088 XDHP47989 1333 aa19.05■□□□□ 0.64
RPS28-201ENST00000417088 ADM5C9JUS6 153 aa19.05■□□□□ 0.64
RPS28-201ENST00000417088 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
RPS28-201ENST00000417088 HUNKP57058 714 aa19.05■□□□□ 0.64
RPS28-201ENST00000417088 ABHD8Q96I13 439 aa19.05■□□□□ 0.64
RPS28-201ENST00000417088 STK31Q9BXU1 1019 aa19.05■□□□□ 0.64
RPS28-201ENST00000417088 POLR2AP24928 1970 aaKnown RBP19.04■□□□□ 0.64
RPS28-201ENST00000417088 ATP2B4P23634 1241 aa19.04■□□□□ 0.64
RPS28-201ENST00000417088 NEXNQ0ZGT2 675 aa19.04■□□□□ 0.64
RPS28-201ENST00000417088 TWISTNBQ3B726 338 aaPredicted RBP19.04■□□□□ 0.64
RPS28-201ENST00000417088 RSBN1LQ6PCB5 846 aaPredicted RBP19.04■□□□□ 0.64
RPS28-201ENST00000417088 G2E3Q7L622 706 aa19.04■□□□□ 0.64
RPS28-201ENST00000417088 TTLL11Q8NHH1 800 aa19.04■□□□□ 0.64
RPS28-201ENST00000417088 ZIC5Q96T25 663 aa19.04■□□□□ 0.64
RPS28-201ENST00000417088 CDC5LQ99459 802 aaKnown RBP19.04■□□□□ 0.64
RPS28-201ENST00000417088 ASTN2O75129 1339 aaPredicted RBP19.03■□□□□ 0.64
RPS28-201ENST00000417088 WTIPA6NIX2 430 aaPredicted RBP19.03■□□□□ 0.64
RPS28-201ENST00000417088 NEURL1BA8MQ27 555 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 CA12O43570 354 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 ZNF280AP59817 542 aaPredicted RBP19.03■□□□□ 0.64
RPS28-201ENST00000417088 NOGQ13253 232 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 CWF19L2Q2TBE0 894 aaKnown RBP19.03■□□□□ 0.64
RPS28-201ENST00000417088 AGBL3Q8NEM8 1001 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 GREM2Q9H772 168 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 GBA2Q9HCG7 927 aaPredicted RBP19.03■□□□□ 0.64
RPS28-201ENST00000417088 GGA3Q9NZ52 723 aa19.03■□□□□ 0.64
RPS28-201ENST00000417088 ZNF609O15014 1411 aa19.02■□□□□ 0.64
RPS28-201ENST00000417088 SLC4A2P04920 1241 aa19.02■□□□□ 0.64
RPS28-201ENST00000417088 C2orf69Q8N8R5 385 aa19.02■□□□□ 0.64
RPS28-201ENST00000417088 GMLQ99445 158 aa19.02■□□□□ 0.64
RPS28-201ENST00000417088 BSDC1Q9NW68 430 aaPredicted RBP19.02■□□□□ 0.64
RPS28-201ENST00000417088 MINPP1Q9UNW1 487 aa19.02■□□□□ 0.64
RPS28-201ENST00000417088 IL16Q14005 1332 aa19.01■□□□□ 0.63
RPS28-201ENST00000417088 H7C1W4 665 aa19.01■□□□□ 0.63
RPS28-201ENST00000417088 RGMBQ6NW40 437 aa19.01■□□□□ 0.63
RPS28-201ENST00000417088 PODNQ7Z5L7 613 aa19.01■□□□□ 0.63
RPS28-201ENST00000417088 SULF1Q8IWU6 871 aa19.01■□□□□ 0.63
RPS28-201ENST00000417088 USP17L3A6NCW0 530 aa19■□□□□ 0.63
RPS28-201ENST00000417088 USP17L4A6NCW7 530 aa19■□□□□ 0.63
RPS28-201ENST00000417088 FAM155AB1AL88 458 aaPredicted RBP19■□□□□ 0.63
RPS28-201ENST00000417088 SCARF1Q14162 830 aa19■□□□□ 0.63
RPS28-201ENST00000417088 USP17L1Q7RTZ2 530 aa19■□□□□ 0.63
RPS28-201ENST00000417088 UBE3BQ7Z3V4 1068 aa19■□□□□ 0.63
RPS28-201ENST00000417088 MED23Q9ULK4 1368 aa18.99■□□□□ 0.63
RPS28-201ENST00000417088 USP17L8P0C7I0 530 aa18.99■□□□□ 0.63
RPS28-201ENST00000417088 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
RPS28-201ENST00000417088 ANGEL2Q5VTE6 544 aaKnown RBP18.99■□□□□ 0.63
RPS28-201ENST00000417088 CDCA5Q96FF9 252 aa18.99■□□□□ 0.63
RPS28-201ENST00000417088 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
RPS28-201ENST00000417088 FLIIQ13045 1269 aa18.98■□□□□ 0.63
RPS28-201ENST00000417088 CCDC102AQ96A19 550 aa18.98■□□□□ 0.63
RPS28-201ENST00000417088 MYOZ2Q9NPC6 264 aa18.98■□□□□ 0.63
RPS28-201ENST00000417088 PSME4Q14997 1843 aa18.97■□□□□ 0.63
RPS28-201ENST00000417088 ZNF157P51786 506 aaPredicted RBP18.97■□□□□ 0.63
RPS28-201ENST00000417088 GCKRQ14397 625 aa18.97■□□□□ 0.63
RPS28-201ENST00000417088 PLA2G12BQ9BX93 195 aa18.97■□□□□ 0.63
RPS28-201ENST00000417088 MYH3P11055 1940 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms