RNA–Protein interactions for RNA: ENST00000416538.5

UBXN4-203, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 1,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-203ENST00000416538 CTSWP56202 376 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 CNTNAP1P78357 1384 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 CCDC152Q4G0S7 254 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 TBC1D16Q8TBP0 767 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 CHMP4AQ9BY43 222 aa19.38■□□□□ 0.69
UBXN4-203ENST00000416538 CASP7P55210 303 aa19.37■□□□□ 0.69
UBXN4-203ENST00000416538 WASHC4Q2M389 1173 aa19.37■□□□□ 0.69
UBXN4-203ENST00000416538 UBE3BQ7Z3V4 1068 aa19.37■□□□□ 0.69
UBXN4-203ENST00000416538 TRPM4Q8TD43 1214 aa19.37■□□□□ 0.69
UBXN4-203ENST00000416538 KCNQ5Q9NR82 932 aa19.37■□□□□ 0.69
UBXN4-203ENST00000416538 WTIPA6NIX2 430 aaPredicted RBP19.36■□□□□ 0.69
UBXN4-203ENST00000416538 C6orf229H3BNL8 230 aa19.36■□□□□ 0.69
UBXN4-203ENST00000416538 FKBP5Q13451 457 aaPredicted RBP19.36■□□□□ 0.69
UBXN4-203ENST00000416538 TTLL11Q8NHH1 800 aa19.36■□□□□ 0.69
UBXN4-203ENST00000416538 DNAAF4Q8WXU2 420 aa19.36■□□□□ 0.69
UBXN4-203ENST00000416538 GREM2Q9H772 168 aa19.36■□□□□ 0.69
UBXN4-203ENST00000416538 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
UBXN4-203ENST00000416538 F6X3S4 739 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 H7C1W4 665 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 TRAF5O00463 557 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 PSMD14O00487 310 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 ECE2O60344 883 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 HIRAP54198 1017 aaPredicted RBP19.35■□□□□ 0.69
UBXN4-203ENST00000416538 NEXNQ0ZGT2 675 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 GCKRQ14397 625 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 DOK7Q18PE1 504 aa19.35■□□□□ 0.69
UBXN4-203ENST00000416538 USP50Q70EL3 339 aaPredicted RBP19.35■□□□□ 0.69
UBXN4-203ENST00000416538 ADARB2Q9NS39 739 aaKnown RBP19.35■□□□□ 0.69
UBXN4-203ENST00000416538 ZBTB12Q9Y330 459 aaPredicted RBP19.35■□□□□ 0.69
UBXN4-203ENST00000416538 TMEM88BA6NKF7 163 aa19.34■□□□□ 0.69
UBXN4-203ENST00000416538 UFL1O94874 794 aa19.34■□□□□ 0.69
UBXN4-203ENST00000416538 EGFRP00533 1210 aa19.33■□□□□ 0.68
UBXN4-203ENST00000416538 HSPA1AP0DMV8 641 aaKnown RBP19.33■□□□□ 0.68
UBXN4-203ENST00000416538 HSPA1BP0DMV9 641 aaKnown RBP19.33■□□□□ 0.68
UBXN4-203ENST00000416538 HSP90B1P14625 803 aaKnown RBP19.33■□□□□ 0.68
UBXN4-203ENST00000416538 FAM161AQ3B820 660 aa19.32■□□□□ 0.68
UBXN4-203ENST00000416538 ANKRD18AQ8IVF6 992 aa19.32■□□□□ 0.68
UBXN4-203ENST00000416538 PLA2G12BQ9BX93 195 aa19.32■□□□□ 0.68
UBXN4-203ENST00000416538 BCL2L13Q9BXK5 485 aa19.32■□□□□ 0.68
UBXN4-203ENST00000416538 XDHP47989 1333 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 TNIP1Q15025 636 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 MICALL2Q8IY33 904 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 LINS1Q8NG48 757 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 GGA1Q9UJY5 639 aa19.31■□□□□ 0.68
UBXN4-203ENST00000416538 VEGFBP49765 207 aa19.3■□□□□ 0.68
UBXN4-203ENST00000416538 EYA3Q99504 573 aa19.3■□□□□ 0.68
UBXN4-203ENST00000416538 MYH16Q9H6N6 1097 aa19.3■□□□□ 0.68
UBXN4-203ENST00000416538 CNOT7Q9UIV1 285 aaKnown RBP19.3■□□□□ 0.68
UBXN4-203ENST00000416538 ZNF609O15014 1411 aa19.3■□□□□ 0.68
UBXN4-203ENST00000416538 RASSF10A6NK89 507 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 BEND3Q5T5X7 828 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 COL13A1Q5TAT6 717 aaPredicted RBP19.29■□□□□ 0.68
UBXN4-203ENST00000416538 IFFO2Q5TF58 517 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 CST9Q5W186 159 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 SAMD7Q7Z3H4 446 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 CDC5LQ99459 802 aaKnown RBP19.29■□□□□ 0.68
UBXN4-203ENST00000416538 GLIS2Q9BZE0 524 aaPredicted RBP19.29■□□□□ 0.68
UBXN4-203ENST00000416538 PGAP2Q9UHJ9 254 aa19.29■□□□□ 0.68
UBXN4-203ENST00000416538 DLK2Q6UY11 383 aa19.28■□□□□ 0.68
UBXN4-203ENST00000416538 MINPP1Q9UNW1 487 aa19.28■□□□□ 0.68
UBXN4-203ENST00000416538 CSF1RP07333 972 aa19.27■□□□□ 0.68
UBXN4-203ENST00000416538 ITGA6P23229 1130 aa19.27■□□□□ 0.68
UBXN4-203ENST00000416538 KLRK1P26718 216 aa19.27■□□□□ 0.68
UBXN4-203ENST00000416538 DPF2Q92785 391 aa19.27■□□□□ 0.68
UBXN4-203ENST00000416538 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
UBXN4-203ENST00000416538 BSDC1Q9NW68 430 aaPredicted RBP19.27■□□□□ 0.68
UBXN4-203ENST00000416538 MED23Q9ULK4 1368 aa19.27■□□□□ 0.68
UBXN4-203ENST00000416538 TBC1D10BQ4KMP7 808 aaPredicted RBP19.26■□□□□ 0.67
UBXN4-203ENST00000416538 EPHA10Q5JZY3 1008 aa19.26■□□□□ 0.67
UBXN4-203ENST00000416538 VIL1P09327 827 aaKnown RBP19.25■□□□□ 0.67
UBXN4-203ENST00000416538 FOXO4P98177 505 aa19.25■□□□□ 0.67
UBXN4-203ENST00000416538 TXNRD3Q86VQ6 643 aa19.25■□□□□ 0.67
UBXN4-203ENST00000416538 ABT1Q9ULW3 272 aaKnown RBP19.25■□□□□ 0.67
UBXN4-203ENST00000416538 ASTN2O75129 1339 aaPredicted RBP19.25■□□□□ 0.67
UBXN4-203ENST00000416538 ATP2B4P23634 1241 aa19.24■□□□□ 0.67
UBXN4-203ENST00000416538 RPS12P25398 132 aaKnown RBP19.24■□□□□ 0.67
UBXN4-203ENST00000416538 CCT4P50991 539 aaKnown RBP19.24■□□□□ 0.67
UBXN4-203ENST00000416538 H7C1D1 291 aa19.23■□□□□ 0.67
UBXN4-203ENST00000416538 ZC3H15Q8WU90 426 aaKnown RBP19.23■□□□□ 0.67
UBXN4-203ENST00000416538 GMLQ99445 158 aa19.23■□□□□ 0.67
UBXN4-203ENST00000416538 IRS2Q9Y4H2 1338 aa19.23■□□□□ 0.67
UBXN4-203ENST00000416538 FOXN1O15353 648 aa19.22■□□□□ 0.67
UBXN4-203ENST00000416538 DEFB115Q30KQ5 88 aa19.22■□□□□ 0.67
UBXN4-203ENST00000416538 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
UBXN4-203ENST00000416538 TLL2Q9Y6L7 1015 aa19.22■□□□□ 0.67
UBXN4-203ENST00000416538 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 SNAP23O00161 211 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 GRM8O00222 908 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 CELF2O95319 508 aaKnown RBP19.21■□□□□ 0.67
UBXN4-203ENST00000416538 IGHMBP2P38935 993 aaKnown RBP19.21■□□□□ 0.67
UBXN4-203ENST00000416538 KIF4BQ2VIQ3 1234 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 RSBN1LQ6PCB5 846 aaPredicted RBP19.21■□□□□ 0.67
UBXN4-203ENST00000416538 MRPL50Q8N5N7 158 aaKnown RBP19.21■□□□□ 0.67
UBXN4-203ENST00000416538 ARAP2Q8WZ64 1704 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 MXD3Q9BW11 206 aa19.21■□□□□ 0.67
UBXN4-203ENST00000416538 WDR33Q9C0J8 1336 aaKnown RBP19.21■□□□□ 0.67
UBXN4-203ENST00000416538 ADM5C9JUS6 153 aa19.2■□□□□ 0.66
UBXN4-203ENST00000416538 ZNF280AP59817 542 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms