RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 FSTL1Q12841 308 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 SP8Q8IXZ3 490 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 SMC5Q8IY18 1101 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 MPNDQ8N594 471 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 SMC1BQ8NDV3 1235 aa11.48□□□□□ -0.57
CHRNA1-206ENST00000416004 WDR90Q96KV7 1748 aa11.47□□□□□ -0.57
CHRNA1-206ENST00000416004 HSPA6P17066 643 aa11.47□□□□□ -0.57
CHRNA1-206ENST00000416004 SF3B3Q15393 1217 aaKnown RBP11.47□□□□□ -0.57
CHRNA1-206ENST00000416004 MYH3P11055 1940 aa11.47□□□□□ -0.57
CHRNA1-206ENST00000416004 SCN4AP35499 1836 aa11.47□□□□□ -0.57
CHRNA1-206ENST00000416004 PPIP5K2O43314 1243 aa11.46□□□□□ -0.57
CHRNA1-206ENST00000416004 LMOD1P29536 600 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-206ENST00000416004 GCKRQ14397 625 aa11.46□□□□□ -0.57
CHRNA1-206ENST00000416004 C3orf67Q6ZVT6 689 aa11.46□□□□□ -0.57
CHRNA1-206ENST00000416004 RPAP2Q8IXW5 612 aaPredicted RBP11.46□□□□□ -0.57
CHRNA1-206ENST00000416004 GRM8O00222 908 aa11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 OLFM4Q6UX06 510 aa11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 JARID2Q92833 1246 aaPredicted RBP11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 EYA3Q99504 573 aa11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 C9orf78Q9NZ63 289 aaPredicted RBP11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 UTYO14607 1347 aa11.46□□□□□ -0.58
CHRNA1-206ENST00000416004 PNMA6EA0A0J9YXQ4 647 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 G3V3G9 751 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 DDNO94850 711 aaPredicted RBP11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 DEKP35659 375 aaKnown RBP11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 APLP1P51693 650 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 PRELPP51888 382 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 DCAF8Q5TAQ9 597 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 KAZALD1Q96I82 304 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 CDC5LQ99459 802 aaKnown RBP11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 CDHR2Q9BYE9 1310 aa11.45□□□□□ -0.58
CHRNA1-206ENST00000416004 ANKRD18AQ8IVF6 992 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 GPC2Q8N158 579 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 NSFL1CQ9UNZ2 370 aaKnown RBP11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 TAF1P21675 1872 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 RGS3P49796 1198 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 RPS8P62241 208 aaKnown RBP11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 ATP8B2P98198 1209 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 SUCLG2Q96I99 432 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 DCTPP1Q9H773 170 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 GJA3Q9Y6H8 435 aa11.44□□□□□ -0.58
CHRNA1-206ENST00000416004 C6orf229H3BNL8 230 aa11.43□□□□□ -0.58
CHRNA1-206ENST00000416004 FZD9O00144 591 aa11.43□□□□□ -0.58
CHRNA1-206ENST00000416004 PDE4AP27815 886 aa11.43□□□□□ -0.58
CHRNA1-206ENST00000416004 PNMA8AQ86V59 439 aaPredicted RBP11.43□□□□□ -0.58
CHRNA1-206ENST00000416004 ANKIB1Q9P2G1 1089 aa11.43□□□□□ -0.58
CHRNA1-206ENST00000416004 CASP7P55210 303 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 NUCB1Q02818 461 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 TNIP1Q15025 636 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 AOC3Q16853 763 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 EPHA10Q5JZY3 1008 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 UBE3BQ7Z3V4 1068 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 GCC1Q96CN9 775 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 L3MBTL3Q96JM7 780 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 RTFDC1Q9BY42 306 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 CLEC11AQ9Y240 323 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 IGHMBP2P38935 993 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 CTSWP56202 376 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 WASHC4Q2M389 1173 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 EAPPQ56P03 285 aaPredicted RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 CELF1Q92879 486 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 LNPKQ9C0E8 428 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 BICC1Q9H694 974 aaKnown RBP11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 ZNRF3Q9ULT6 936 aa11.42□□□□□ -0.58
CHRNA1-206ENST00000416004 ZNF541Q9H0D2 1346 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 HMMRO75330 724 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 KIAA2012Q0VF49 1180 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 POLA2Q14181 598 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 ANKRD45Q5TZF3 282 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 SSH3Q8TE77 659 aa11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 CCDC85AQ96PX6 553 aaPredicted RBP11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 ZC3H12CQ9C0D7 883 aaKnown RBP11.41□□□□□ -0.58
CHRNA1-206ENST00000416004 H7C1W4 665 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 SRGAP3O43295 1099 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 MTX1Q13505 466 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 CHD1LQ86WJ1 897 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 LDHDQ86WU2 507 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 MPHOSPH8Q99549 860 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 GGA1Q9UJY5 639 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 SNED1Q8TER0 1413 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 SPEF2Q9C093 1822 aa11.4□□□□□ -0.58
CHRNA1-206ENST00000416004 APBB1O00213 710 aa11.4□□□□□ -0.59
CHRNA1-206ENST00000416004 EPHX2P34913 555 aa11.4□□□□□ -0.59
CHRNA1-206ENST00000416004 CIAPIN1Q6FI81 312 aa11.4□□□□□ -0.59
CHRNA1-206ENST00000416004 EXOC6BQ9Y2D4 811 aa11.4□□□□□ -0.59
CHRNA1-206ENST00000416004 SMARCA5O60264 1052 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 TAF7LQ5H9L4 462 aa11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 SEC31BQ9NQW1 1179 aa11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 CHMP3Q9Y3E7 222 aa11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 XDHP47989 1333 aa11.39□□□□□ -0.59
CHRNA1-206ENST00000416004 ANKRD18BA2A2Z9 1011 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 RIMBP2O15034 1052 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 UFL1O94874 794 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 ATP2B4P23634 1241 aa11.38□□□□□ -0.59
CHRNA1-206ENST00000416004 GPSM2P81274 684 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms