RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 TBC1D9BQ66K14 1250 aa13.96□□□□□ -0.17
RFFL-205ENST00000415395 RILPL2Q969X0 211 aa13.96□□□□□ -0.17
RFFL-205ENST00000415395 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
RFFL-205ENST00000415395 KIF2CQ99661 725 aa13.96□□□□□ -0.17
RFFL-205ENST00000415395 CWC22Q9HCG8 908 aaKnown RBP13.96□□□□□ -0.17
RFFL-205ENST00000415395 ST18O60284 1047 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 ATP5JP18859 108 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 TICAM2Q86XR7 235 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 EVI5LQ96CN4 794 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 DBNLQ9UJU6 430 aaKnown RBP13.95□□□□□ -0.18
RFFL-205ENST00000415395 RIPOR2Q9Y4F9 1068 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 ARAP2Q8WZ64 1704 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 EP400Q96L91 3159 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 HCLS1P14317 486 aaPredicted RBP13.95□□□□□ -0.18
RFFL-205ENST00000415395 CHMLP26374 656 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 SF3B3Q15393 1217 aaKnown RBP13.95□□□□□ -0.18
RFFL-205ENST00000415395 RIC1Q4ADV7 1423 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 LDHAL6AQ6ZMR3 332 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 CARMIL3Q8ND23 1372 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 ABCC12Q96J65 1359 aa13.95□□□□□ -0.18
RFFL-205ENST00000415395 SRP68Q9UHB9 627 aaKnown RBP13.95□□□□□ -0.18
RFFL-205ENST00000415395 RFX7Q2KHR2 1363 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 MROH5Q6ZUA9 1318 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.94□□□□□ -0.18
RFFL-205ENST00000415395 HIP1O00291 1037 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 CCDC173Q0VFZ6 552 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 KLHL40Q2TBA0 621 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 POTEAQ6S8J7 498 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 TPTE2Q6XPS3 522 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 AMIGO3Q86WK7 504 aa13.94□□□□□ -0.18
RFFL-205ENST00000415395 PUS3Q9BZE2 481 aaKnown RBP13.94□□□□□ -0.18
RFFL-205ENST00000415395 TLR7Q9NYK1 1049 aaKnown RBP13.94□□□□□ -0.18
RFFL-205ENST00000415395 FAM177BA6PVY3 158 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 APBA3O96018 575 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 PROM2Q8N271 834 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.93□□□□□ -0.18
RFFL-205ENST00000415395 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
RFFL-205ENST00000415395 ESYT1Q9BSJ8 1104 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 CNNM1Q9NRU3 951 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 A0A1B0GUL7 405 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 ESPNB1AK53 854 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 PHF14O94880 888 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 GTF2E1P29083 439 aaPredicted RBP13.93□□□□□ -0.18
RFFL-205ENST00000415395 ERFEQ4G0M1 354 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 NBPF5PQ86XG9 351 aaPredicted RBP13.93□□□□□ -0.18
RFFL-205ENST00000415395 CDC5LQ99459 802 aaKnown RBP13.93□□□□□ -0.18
RFFL-205ENST00000415395 DBNDD2Q9BQY9 259 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 PANK2Q9BZ23 570 aa13.93□□□□□ -0.18
RFFL-205ENST00000415395 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
RFFL-205ENST00000415395 METTL24Q5JXM2 366 aa13.92□□□□□ -0.18
RFFL-205ENST00000415395 VGLL2Q8N8G2 317 aa13.92□□□□□ -0.18
RFFL-205ENST00000415395 RUFY2Q8WXA3 655 aa13.92□□□□□ -0.18
RFFL-205ENST00000415395 USP26Q9BXU7 913 aa13.92□□□□□ -0.18
RFFL-205ENST00000415395 A0A1B0GUL6 1792 aa13.92□□□□□ -0.18
RFFL-205ENST00000415395 BICDL1Q6ZP65 573 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 SMIM5Q71RC9 77 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 FLAD1Q8NFF5 587 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 NEUROD6Q96NK8 337 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 NAP1L5Q96NT1 182 aaPredicted RBP13.91□□□□□ -0.18
RFFL-205ENST00000415395 MPHOSPH8Q99549 860 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 HAUS7Q99871 368 aa13.91□□□□□ -0.18
RFFL-205ENST00000415395 QSER1Q2KHR3 1735 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 PDE8BO95263 885 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 NLRP3Q96P20 1036 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 BOLA2Q9H3K6 86 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
RFFL-205ENST00000415395 RAD50Q92878 1312 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 BAG4O95429 457 aaKnown RBP13.9□□□□□ -0.18
RFFL-205ENST00000415395 MAP4K4O95819 1239 aaPredicted RBP13.9□□□□□ -0.18
RFFL-205ENST00000415395 GYS1P13807 737 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 MCM2P49736 904 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 TIMM10P62072 90 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 NFIXQ14938 502 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 ATP2B3Q16720 1220 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 CCDC158Q5M9N0 1113 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 AKT1S1Q96B36 256 aa13.9□□□□□ -0.18
RFFL-205ENST00000415395 SGSM2O43147 1006 aa13.89□□□□□ -0.19
RFFL-205ENST00000415395 PUM3Q15397 648 aaKnown RBP13.89□□□□□ -0.19
RFFL-205ENST00000415395 ZNF512BQ96KM6 892 aaPredicted RBP13.89□□□□□ -0.19
RFFL-205ENST00000415395 DIAPH3Q9NSV4 1193 aa13.89□□□□□ -0.19
RFFL-205ENST00000415395 PRKCSHP14314 528 aaPredicted RBP13.88□□□□□ -0.19
RFFL-205ENST00000415395 MCCP23508 829 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 NASPP49321 788 aaPredicted RBP13.88□□□□□ -0.19
RFFL-205ENST00000415395 GLIPR1L2Q4G1C9 344 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 ANKRD18AQ8IVF6 992 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 LPIN2Q92539 896 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 XAGE2Q96GT9 111 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 SEC31BQ9NQW1 1179 aa13.88□□□□□ -0.19
RFFL-205ENST00000415395 TNRC6CQ9HCJ0 1690 aaKnown RBP13.88□□□□□ -0.19
RFFL-205ENST00000415395 FGFR2P21802 821 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 TM4SF1P30408 202 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 ZNF445P59923 1031 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 GORABQ5T7V8 394 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 CNBD1Q8NA66 436 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 FSD1Q9BTV5 496 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 SNRKQ9NRH2 765 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 BSDC1Q9NW68 430 aaPredicted RBP13.87□□□□□ -0.19
RFFL-205ENST00000415395 NRXN2Q9P2S2 1712 aa13.87□□□□□ -0.19
RFFL-205ENST00000415395 CD2BP2O95400 341 aaKnown RBP13.87□□□□□ -0.19
RFFL-205ENST00000415395 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms