RNA–Protein interactions for RNA: ENST00000414906.5

ZNF490-202, Transcript of zinc finger protein 490, humanhuman

TSL 3

Gene ZNF490, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF490-202ENST00000414906 CNKSR1Q969H4 720 aa13.5□□□□□ -0.25
ZNF490-202ENST00000414906 CDC5LQ99459 802 aaKnown RBP13.5□□□□□ -0.25
ZNF490-202ENST00000414906 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
ZNF490-202ENST00000414906 BBOX1O75936 387 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 RGS19P49795 217 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 RPS8P62241 208 aaKnown RBP13.49□□□□□ -0.25
ZNF490-202ENST00000414906 ANKRD18AQ8IVF6 992 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 SIRT2Q8IXJ6 389 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 CELF1Q92879 486 aaKnown RBP13.49□□□□□ -0.25
ZNF490-202ENST00000414906 PRDM10Q9NQV6 1147 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
ZNF490-202ENST00000414906 DLEC1Q9Y238 1755 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 HMMRO75330 724 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 PTPN12Q05209 780 aaKnown RBP13.48□□□□□ -0.25
ZNF490-202ENST00000414906 TAF7LQ5H9L4 462 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 PRPF40BQ6NWY9 871 aaKnown RBP13.48□□□□□ -0.25
ZNF490-202ENST00000414906 TMC4Q7Z404 712 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 TTLL6Q8N841 843 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 RRAGCQ9HB90 399 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 COPRSQ9NQ92 184 aa13.48□□□□□ -0.25
ZNF490-202ENST00000414906 IGHMBP2P38935 993 aaKnown RBP13.47□□□□□ -0.25
ZNF490-202ENST00000414906 DALRD3Q5D0E6 543 aaKnown RBP13.47□□□□□ -0.25
ZNF490-202ENST00000414906 KLHDC4Q8TBB5 520 aa13.47□□□□□ -0.25
ZNF490-202ENST00000414906 ABHD8Q96I13 439 aa13.47□□□□□ -0.25
ZNF490-202ENST00000414906 ZNF594Q96JF6 807 aaPredicted RBP13.47□□□□□ -0.25
ZNF490-202ENST00000414906 MPHOSPH8Q99549 860 aa13.47□□□□□ -0.25
ZNF490-202ENST00000414906 BSDC1Q9NW68 430 aaPredicted RBP13.47□□□□□ -0.25
ZNF490-202ENST00000414906 COL4A1P02462 1669 aa13.47□□□□□ -0.25
ZNF490-202ENST00000414906 PPEF1O14829 653 aaPredicted RBP13.46□□□□□ -0.25
ZNF490-202ENST00000414906 MLLT1Q03111 559 aaPredicted RBP13.46□□□□□ -0.25
ZNF490-202ENST00000414906 ERICH6BQ5W0A0 696 aa13.46□□□□□ -0.25
ZNF490-202ENST00000414906 LDHAL6AQ6ZMR3 332 aa13.46□□□□□ -0.25
ZNF490-202ENST00000414906 FBXO3Q9UK99 471 aa13.46□□□□□ -0.25
ZNF490-202ENST00000414906 BRCA1P38398 1863 aaKnown RBP13.45□□□□□ -0.26
ZNF490-202ENST00000414906 CIAO1O76071 339 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
ZNF490-202ENST00000414906 C9orf131Q5VYM1 1079 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 SP8Q8IXZ3 490 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 C7orf43Q8WVR3 580 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 PA2G4Q9UQ80 394 aaKnown RBP13.45□□□□□ -0.26
ZNF490-202ENST00000414906 NOP58Q9Y2X3 529 aaKnown RBP13.45□□□□□ -0.26
ZNF490-202ENST00000414906 ATP6V0A2Q9Y487 856 aa13.45□□□□□ -0.26
ZNF490-202ENST00000414906 EYA2O00167 538 aa13.44□□□□□ -0.26
ZNF490-202ENST00000414906 PUS3Q9BZE2 481 aaKnown RBP13.44□□□□□ -0.26
ZNF490-202ENST00000414906 SIL1Q9H173 461 aa13.44□□□□□ -0.26
ZNF490-202ENST00000414906 CNNM1Q9NRU3 951 aa13.44□□□□□ -0.26
ZNF490-202ENST00000414906 RIPOR2Q9Y4F9 1068 aa13.44□□□□□ -0.26
ZNF490-202ENST00000414906 TAF1P21675 1872 aa13.44□□□□□ -0.26
ZNF490-202ENST00000414906 SLX4Q8IY92 1834 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 SURF6O75683 361 aaKnown RBP13.43□□□□□ -0.26
ZNF490-202ENST00000414906 SBF1O95248 1867 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
ZNF490-202ENST00000414906 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 CC2D2BQ6DHV5 1058 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 ATG9AQ7Z3C6 839 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
ZNF490-202ENST00000414906 RWDD1Q9H446 243 aaPredicted RBP13.43□□□□□ -0.26
ZNF490-202ENST00000414906 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 BCS1LQ9Y276 419 aa13.43□□□□□ -0.26
ZNF490-202ENST00000414906 MROH5Q6ZUA9 1318 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 C21orf2O43822 256 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
ZNF490-202ENST00000414906 GRIPAP1Q4V328 841 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 SOGA3Q5TF21 947 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 DCTPP1Q9H773 170 aa13.42□□□□□ -0.26
ZNF490-202ENST00000414906 KDM2BQ8NHM5 1336 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 IGHDP01880 384 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 CHRNDQ07001 517 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 SLC51AQ86UW1 340 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 ANKRD2Q9GZV1 360 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 PODXL2Q9NZ53 605 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
ZNF490-202ENST00000414906 EXOC6BQ9Y2D4 811 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 LRRC37AA6NMS7 1700 aa13.41□□□□□ -0.26
ZNF490-202ENST00000414906 SNED1Q8TER0 1413 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 RAB11FIP3O75154 756 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 SASH1O94885 1247 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 GPSM2P81274 684 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 OS9Q13438 667 aaPredicted RBP13.4□□□□□ -0.26
ZNF490-202ENST00000414906 CCDC93Q567U6 631 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 METTL24Q5JXM2 366 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 RTKN2Q8IZC4 609 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 VGLL2Q8N8G2 317 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 ARFGEF1Q9Y6D6 1849 aa13.4□□□□□ -0.26
ZNF490-202ENST00000414906 XDHP47989 1333 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 PDE8BO95263 885 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 MPNDQ8N594 471 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 GCC1Q96CN9 775 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 CEP126Q9P2H0 1117 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 NSFL1CQ9UNZ2 370 aaKnown RBP13.39□□□□□ -0.27
ZNF490-202ENST00000414906 CACNA1SQ13698 1873 aa13.39□□□□□ -0.27
ZNF490-202ENST00000414906 TAF5LO75529 589 aa13.38□□□□□ -0.27
ZNF490-202ENST00000414906 CTCFP49711 727 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms