RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 MPNDQ8N594 471 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 C7orf43Q8WVR3 580 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
HLA-DMB-257ENST00000414017 ZBTB40Q9NUA8 1239 aa13□□□□□ -0.33
HLA-DMB-257ENST00000414017 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
HLA-DMB-257ENST00000414017 C6orf229H3BNL8 230 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 GPSM2P81274 684 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 ATP8B2P98198 1209 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 LRRC24Q50LG9 513 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 CEP85Q6P2H3 762 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 RTKN2Q8IZC4 609 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 HELBQ8NG08 1087 aaPredicted RBP12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 BCL11AQ9H165 835 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 TAOK3Q9H2K8 898 aa12.99□□□□□ -0.33
HLA-DMB-257ENST00000414017 ARFGEF1Q9Y6D6 1849 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 UFL1O94874 794 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 KCNJ4P48050 445 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 PTPN12Q05209 780 aaKnown RBP12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 CHRNDQ07001 517 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 OS9Q13438 667 aaPredicted RBP12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 CC2D2BQ6DHV5 1058 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 GPR101Q96P66 508 aaPredicted RBP12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 ZNF277Q9NRM2 450 aaPredicted RBP12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 MINPP1Q9UNW1 487 aa12.98□□□□□ -0.33
HLA-DMB-257ENST00000414017 NFKBIEO00221 500 aa12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 TAF5LO75529 589 aa12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 RFX5P48382 616 aaPredicted RBP12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 FKBP4Q02790 459 aaKnown RBP eCLIP12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 METTL24Q5JXM2 366 aa12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 GGA1Q9UJY5 639 aa12.97□□□□□ -0.33
HLA-DMB-257ENST00000414017 XDHP47989 1333 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 EYA2O00167 538 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 APBB1O00213 710 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 NEFLP07196 543 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 G3BP1Q13283 466 aaKnown RBP eCLIP12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 MTX1Q13505 466 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 RNF181Q9P0P0 153 aa12.96□□□□□ -0.33
HLA-DMB-257ENST00000414017 G3V3G9 751 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 SNAP23O00161 211 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 PPIP5K2O43314 1243 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 HMMRO75330 724 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 SURF6O75683 361 aaKnown RBP12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 AOC3Q16853 763 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 DCAF8Q5TAQ9 597 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 RPAP2Q8IXW5 612 aaPredicted RBP12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 SUPT20HQ8NEM7 779 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
HLA-DMB-257ENST00000414017 MROH5Q6ZUA9 1318 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 WTIPA6NIX2 430 aaPredicted RBP12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 ATP2B4P23634 1241 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 IARSP41252 1262 aaKnown RBP12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 POLA2Q14181 598 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 LARGE2Q8N3Y3 721 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 TBC1D16Q8TBP0 767 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 PSMD1Q99460 953 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 COPRSQ9NQ92 184 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 EXOC6BQ9Y2D4 811 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 RIPOR2Q9Y4F9 1068 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
HLA-DMB-257ENST00000414017 LMNB1P20700 586 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 DOK7Q18PE1 504 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 WASHC4Q2M389 1173 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 SIRT2Q8IXJ6 389 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 EYA3Q99504 573 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 CEP126Q9P2H0 1117 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 LRRC37AA6NMS7 1700 aa12.93□□□□□ -0.34
HLA-DMB-257ENST00000414017 ZNF804BA4D1E1 1349 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 CIAO1O76071 339 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 IL15P40933 162 aaPredicted RBP12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 PRELPP51888 382 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 TFCP2Q12800 502 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 FER1L6Q2WGJ9 1857 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 ATG9AQ7Z3C6 839 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 JDP2Q8WYK2 163 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 ZC3H12CQ9C0D7 883 aaKnown RBP12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 LEMD3Q9Y2U8 911 aa12.92□□□□□ -0.34
HLA-DMB-257ENST00000414017 LTBP3Q9NS15 1303 aa12.91□□□□□ -0.34
HLA-DMB-257ENST00000414017 KLRK1P26718 216 aa12.91□□□□□ -0.34
HLA-DMB-257ENST00000414017 NIM1KQ8IY84 436 aa12.91□□□□□ -0.34
HLA-DMB-257ENST00000414017 RTFDC1Q9BY42 306 aaPredicted RBP12.91□□□□□ -0.34
HLA-DMB-257ENST00000414017 DBNDD1Q9H9R9 158 aa12.91□□□□□ -0.34
HLA-DMB-257ENST00000414017 DUOX1Q9NRD9 1551 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 PDE8BO95263 885 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 PUM3Q15397 648 aaKnown RBP12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 FBXW7Q969H0 707 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 FBXO3Q9UK99 471 aa12.9□□□□□ -0.34
HLA-DMB-257ENST00000414017 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
HLA-DMB-257ENST00000414017 SLC5A1P13866 664 aa12.89□□□□□ -0.35
HLA-DMB-257ENST00000414017 KIAA2012Q0VF49 1180 aa12.89□□□□□ -0.35
HLA-DMB-257ENST00000414017 ATP2B3Q16720 1220 aa12.89□□□□□ -0.35
HLA-DMB-257ENST00000414017 HSP90AB4PQ58FF6 505 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms