RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-206ENST00000413725 RPAP2Q8IXW5 612 aaPredicted RBP16.37■□□□□ 0.21
SF1-206ENST00000413725 PNMA6EA0A0J9YXQ4 647 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
SF1-206ENST00000413725 PTPN12Q05209 780 aaKnown RBP16.36■□□□□ 0.21
SF1-206ENST00000413725 ARHGAP27Q6ZUM4 889 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 KLHDC4Q8TBB5 520 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 SSH3Q8TE77 659 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 COPRSQ9NQ92 184 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
SF1-206ENST00000413725 POLA2Q14181 598 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 OLFM4Q6UX06 510 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 DPP8Q6V1X1 898 aaPredicted RBP16.35■□□□□ 0.21
SF1-206ENST00000413725 MPNDQ8N594 471 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 EXOC6Q8TAG9 804 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 ANKRD2Q9GZV1 360 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 TAOK3Q9H2K8 898 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 ANKIB1Q9P2G1 1089 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 MINPP1Q9UNW1 487 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 SNED1Q8TER0 1413 aa16.35■□□□□ 0.21
SF1-206ENST00000413725 EYA2O00167 538 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 CIAO1O76071 339 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 NEFLP07196 543 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 SIL1Q9H173 461 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 NSFL1CQ9UNZ2 370 aaKnown RBP16.34■□□□□ 0.21
SF1-206ENST00000413725 MYH13Q9UKX3 1938 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 XDHP47989 1333 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 DUOX1Q9NRD9 1551 aa16.34■□□□□ 0.21
SF1-206ENST00000413725 GPSM2P81274 684 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
SF1-206ENST00000413725 CHRNDQ07001 517 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 PSMD1Q99460 953 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 PUS3Q9BZE2 481 aaKnown RBP16.33■□□□□ 0.2
SF1-206ENST00000413725 PODXL2Q9NZ53 605 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 PA2G4Q9UQ80 394 aaKnown RBP16.33■□□□□ 0.2
SF1-206ENST00000413725 LTBP3Q9NS15 1303 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.2
SF1-206ENST00000413725 ATP2B4P23634 1241 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 G3BP1Q13283 466 aaKnown RBP eCLIP16.32■□□□□ 0.23e-7■□□□□ 8.5
SF1-206ENST00000413725 LRRC24Q50LG9 513 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 SLC51AQ86UW1 340 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 GGA1Q9UJY5 639 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 RIPOR2Q9Y4F9 1068 aa16.32■□□□□ 0.2
SF1-206ENST00000413725 ARAP2Q8WZ64 1704 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 NFKBIEO00221 500 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 SURF6O75683 361 aaKnown RBP16.31■□□□□ 0.2
SF1-206ENST00000413725 UFL1O94874 794 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 IL15P40933 162 aaPredicted RBP16.31■□□□□ 0.2
SF1-206ENST00000413725 KCNJ4P48050 445 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 RASSF7Q02833 373 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 OS9Q13438 667 aaPredicted RBP16.31■□□□□ 0.2
SF1-206ENST00000413725 RTFDC1Q9BY42 306 aaPredicted RBP16.31■□□□□ 0.2
SF1-206ENST00000413725 UTRNP46939 3433 aa16.31■□□□□ 0.2
SF1-206ENST00000413725 HSP90AB4PQ58FF6 505 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 SIRT2Q8IXJ6 389 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 TBC1D16Q8TBP0 767 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 EYA3Q99504 573 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 LEMD3Q9Y2U8 911 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 NOP58Q9Y2X3 529 aaKnown RBP16.3■□□□□ 0.2
SF1-206ENST00000413725 PCDHB15Q9Y5E8 787 aa16.3■□□□□ 0.2
SF1-206ENST00000413725 PSME4Q14997 1843 aa16.29■□□□□ 0.2
SF1-206ENST00000413725 ATG9AQ7Z3C6 839 aa16.29■□□□□ 0.2
SF1-206ENST00000413725 HELBQ8NG08 1087 aaPredicted RBP16.29■□□□□ 0.2
SF1-206ENST00000413725 VPS33BQ9H267 617 aa16.29■□□□□ 0.2
SF1-206ENST00000413725 CEP126Q9P2H0 1117 aa16.29■□□□□ 0.2
SF1-206ENST00000413725 ZNF804BA4D1E1 1349 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 TAF5LO75529 589 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 PDE8BO95263 885 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 LMNB1P20700 586 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
SF1-206ENST00000413725 ERC1Q8IUD2 1116 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 ZNF277Q9NRM2 450 aaPredicted RBP16.28■□□□□ 0.2
SF1-206ENST00000413725 POLLQ9UGP5 575 aa16.28■□□□□ 0.2
SF1-206ENST00000413725 PPIP5K2O43314 1243 aa16.27■□□□□ 0.2
SF1-206ENST00000413725 UBE4AQ14139 1066 aa16.27■□□□□ 0.2
SF1-206ENST00000413725 PUM3Q15397 648 aaKnown RBP16.27■□□□□ 0.2
SF1-206ENST00000413725 WASHC4Q2M389 1173 aa16.27■□□□□ 0.2
SF1-206ENST00000413725 VGLL2Q8N8G2 317 aa16.27■□□□□ 0.2
SF1-206ENST00000413725 EXOC6BQ9Y2D4 811 aa16.27■□□□□ 0.2
SF1-206ENST00000413725 MED23Q9ULK4 1368 aa16.26■□□□□ 0.19
SF1-206ENST00000413725 KIAA2012Q0VF49 1180 aa16.26■□□□□ 0.19
SF1-206ENST00000413725 LARGE2Q8N3Y3 721 aa16.26■□□□□ 0.19
SF1-206ENST00000413725 ZC3H12CQ9C0D7 883 aaKnown RBP16.26■□□□□ 0.19
SF1-206ENST00000413725 RNF181Q9P0P0 153 aa16.26■□□□□ 0.19
SF1-206ENST00000413725 SCN9AQ15858 1988 aa16.26■□□□□ 0.19
SF1-206ENST00000413725 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
SF1-206ENST00000413725 SLC5A1P13866 664 aa16.25■□□□□ 0.19
SF1-206ENST00000413725 HDAC1Q13547 482 aaPredicted RBP16.25■□□□□ 0.19
SF1-206ENST00000413725 AOC3Q16853 763 aa16.25■□□□□ 0.19
SF1-206ENST00000413725 AKAP2Q9Y2D5 859 aa16.25■□□□□ 0.19
SF1-206ENST00000413725 G3V3G9 751 aa16.24■□□□□ 0.19
SF1-206ENST00000413725 RIMBP2O15034 1052 aa16.24■□□□□ 0.19
SF1-206ENST00000413725 IFIT1P09914 478 aaKnown RBP16.24■□□□□ 0.19
SF1-206ENST00000413725 TFCP2Q12800 502 aa16.24■□□□□ 0.19
SF1-206ENST00000413725 ATP2B3Q16720 1220 aa16.24■□□□□ 0.19
SF1-206ENST00000413725 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
SF1-206ENST00000413725 C9orf131Q5VYM1 1079 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms