RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 CXCL9Q07325 125 aa18.76■□□□□ 0.59
LIMS4-201ENST00000413601 BSDC1Q9NW68 430 aaPredicted RBP18.76■□□□□ 0.59
LIMS4-201ENST00000413601 A0A1B0GUL6 1792 aa18.76■□□□□ 0.59
LIMS4-201ENST00000413601 SCN9AQ15858 1988 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 UFL1O94874 794 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 EPHA10Q5JZY3 1008 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 EYA3Q99504 573 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 DBNDD1Q9H9R9 158 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 GGA1Q9UJY5 639 aa18.75■□□□□ 0.59
LIMS4-201ENST00000413601 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 YDJCA8MPS7 323 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 RAD17O75943 681 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 EPHX2P34913 555 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 IGHMBP2P38935 993 aaKnown RBP18.74■□□□□ 0.59
LIMS4-201ENST00000413601 MINPP1Q9UNW1 487 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 CHMP3Q9Y3E7 222 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 XDHP47989 1333 aa18.74■□□□□ 0.59
LIMS4-201ENST00000413601 PSME4Q14997 1843 aa18.73■□□□□ 0.59
LIMS4-201ENST00000413601 NBPF7P0C2Y1 421 aaPredicted RBP18.73■□□□□ 0.59
LIMS4-201ENST00000413601 SCNN1DP51172 638 aa18.73■□□□□ 0.59
LIMS4-201ENST00000413601 DOK7Q18PE1 504 aa18.73■□□□□ 0.59
LIMS4-201ENST00000413601 EAPPQ56P03 285 aaPredicted RBP18.73■□□□□ 0.59
LIMS4-201ENST00000413601 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
LIMS4-201ENST00000413601 LMBR1LQ6UX01 489 aa18.73■□□□□ 0.59
LIMS4-201ENST00000413601 ZC3H12CQ9C0D7 883 aaKnown RBP18.73■□□□□ 0.59
LIMS4-201ENST00000413601 ANKRD18BA2A2Z9 1011 aa18.72■□□□□ 0.59
LIMS4-201ENST00000413601 WTIPA6NIX2 430 aaPredicted RBP18.72■□□□□ 0.59
LIMS4-201ENST00000413601 LMOD1P29536 600 aaPredicted RBP18.72■□□□□ 0.59
LIMS4-201ENST00000413601 EPS15P42566 896 aa18.72■□□□□ 0.59
LIMS4-201ENST00000413601 APLP1P51693 650 aa18.72■□□□□ 0.59
LIMS4-201ENST00000413601 RARSP54136 660 aaKnown RBP18.72■□□□□ 0.59
LIMS4-201ENST00000413601 CHADLQ6NUI6 762 aa18.72■□□□□ 0.59
LIMS4-201ENST00000413601 MPHOSPH8Q99549 860 aa18.72■□□□□ 0.59
LIMS4-201ENST00000413601 NOB1Q9ULX3 412 aaKnown RBP18.72■□□□□ 0.59
LIMS4-201ENST00000413601 ECE2O60344 883 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 ATP2B4P23634 1241 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 IFIT5Q13325 482 aaKnown RBP18.71■□□□□ 0.59
LIMS4-201ENST00000413601 TNIP1Q15025 636 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 SUCLG2Q96I99 432 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 KCNQ5Q9NR82 932 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 UTYO14607 1347 aa18.71■□□□□ 0.59
LIMS4-201ENST00000413601 G3V3G9 751 aa18.7■□□□□ 0.58
LIMS4-201ENST00000413601 GMPSP49915 693 aaPredicted RBP18.7■□□□□ 0.58
LIMS4-201ENST00000413601 BRPF1P55201 1214 aaPredicted RBP18.7■□□□□ 0.58
LIMS4-201ENST00000413601 DCAF8Q5TAQ9 597 aa18.7■□□□□ 0.58
LIMS4-201ENST00000413601 PNMA8AQ86V59 439 aaPredicted RBP18.7■□□□□ 0.58
LIMS4-201ENST00000413601 LDHDQ86WU2 507 aa18.7■□□□□ 0.58
LIMS4-201ENST00000413601 KAZALD1Q96I82 304 aa18.7■□□□□ 0.58
LIMS4-201ENST00000413601 CLEC11AQ9Y240 323 aa18.7■□□□□ 0.58
LIMS4-201ENST00000413601 PSMD14O00487 310 aa18.69■□□□□ 0.58
LIMS4-201ENST00000413601 CCT4P50991 539 aaKnown RBP18.69■□□□□ 0.58
LIMS4-201ENST00000413601 USP44Q9H0E7 712 aa18.69■□□□□ 0.58
LIMS4-201ENST00000413601 GPRC5DQ9NZD1 345 aa18.69■□□□□ 0.58
LIMS4-201ENST00000413601 HTRA3P83110 453 aa18.68■□□□□ 0.58
LIMS4-201ENST00000413601 CCDC57Q2TAC2 916 aa18.68■□□□□ 0.58
LIMS4-201ENST00000413601 ZNF594Q96JF6 807 aaPredicted RBP18.68■□□□□ 0.58
LIMS4-201ENST00000413601 CHRNDQ07001 517 aa18.67■□□□□ 0.58
LIMS4-201ENST00000413601 API5Q9BZZ5 524 aaKnown RBP18.67■□□□□ 0.58
LIMS4-201ENST00000413601 ANKRD2Q9GZV1 360 aa18.67■□□□□ 0.58
LIMS4-201ENST00000413601 BICC1Q9H694 974 aaKnown RBP18.67■□□□□ 0.58
LIMS4-201ENST00000413601 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
LIMS4-201ENST00000413601 ZNF646O15015 1829 aaPredicted RBP18.67■□□□□ 0.58
LIMS4-201ENST00000413601 TAF7LQ5H9L4 462 aa18.66■□□□□ 0.58
LIMS4-201ENST00000413601 LEMD3Q9Y2U8 911 aa18.66■□□□□ 0.58
LIMS4-201ENST00000413601 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
LIMS4-201ENST00000413601 MED23Q9ULK4 1368 aa18.66■□□□□ 0.58
LIMS4-201ENST00000413601 POLR2AP24928 1970 aaKnown RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 SHTN1A0MZ66 631 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 TAF5LO75529 589 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 BCAR3O75815 825 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 MAP1SQ66K74 1059 aaPredicted RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 LDHAL6AQ6ZMR3 332 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 USP50Q70EL3 339 aaPredicted RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 TXNRD3Q86VQ6 643 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 ANKRD44Q8N8A2 993 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 HELBQ8NG08 1087 aaPredicted RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 ADARB2Q9NS39 739 aaKnown RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 CNOT7Q9UIV1 285 aaKnown RBP18.65■□□□□ 0.58
LIMS4-201ENST00000413601 ZNF804BA4D1E1 1349 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 KIF16BQ96L93 1317 aa18.65■□□□□ 0.58
LIMS4-201ENST00000413601 SNAP23O00161 211 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 ITGBL1O95965 494 aaPredicted RBP18.63■□□□□ 0.57
LIMS4-201ENST00000413601 VIL1P09327 827 aaKnown RBP18.63■□□□□ 0.57
LIMS4-201ENST00000413601 KLRK1P26718 216 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 KCNJ4P48050 445 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 RABL6Q3YEC7 729 aaPredicted RBP18.63■□□□□ 0.57
LIMS4-201ENST00000413601 MICALL2Q8IY33 904 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 ARHGAP45Q92619 1136 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 DPF2Q92785 391 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 CNNM1Q9NRU3 951 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 TRPM7Q96QT4 1865 aa18.63■□□□□ 0.57
LIMS4-201ENST00000413601 PLIN1O60240 522 aa18.62■□□□□ 0.57
LIMS4-201ENST00000413601 PODNQ7Z5L7 613 aa18.62■□□□□ 0.57
LIMS4-201ENST00000413601 CNTROBQ8N137 903 aa18.62■□□□□ 0.57
LIMS4-201ENST00000413601 DNAJC5GQ8N7S2 189 aa18.62■□□□□ 0.57
LIMS4-201ENST00000413601 FRAT1Q92837 279 aaPredicted RBP18.62■□□□□ 0.57
LIMS4-201ENST00000413601 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
LIMS4-201ENST00000413601 H7C1D1 291 aa18.61■□□□□ 0.57
LIMS4-201ENST00000413601 RPS12P25398 132 aaKnown RBP18.61■□□□□ 0.57
LIMS4-201ENST00000413601 PUS3Q9BZE2 481 aaKnown RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms