RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 EYA3Q99504 573 aa15.84■□□□□ 0.13
LIMS2-210ENST00000413578 GBA2Q9HCG7 927 aaPredicted RBP15.84■□□□□ 0.13
LIMS2-210ENST00000413578 LAS1LQ9Y4W2 734 aaKnown RBP15.84■□□□□ 0.13
LIMS2-210ENST00000413578 ADM5C9JUS6 153 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 C6orf229H3BNL8 230 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 MLLT1Q03111 559 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-210ENST00000413578 DOK7Q18PE1 504 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-210ENST00000413578 RGMBQ6NW40 437 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 ZBTB38Q8NAP3 1195 aaPredicted RBP15.83■□□□□ 0.12
LIMS2-210ENST00000413578 SEC31BQ9NQW1 1179 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 MBIPQ9NS73 344 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
LIMS2-210ENST00000413578 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
LIMS2-210ENST00000413578 SAGE1Q9NXZ1 904 aa15.82■□□□□ 0.12
LIMS2-210ENST00000413578 ASTN2O75129 1339 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-210ENST00000413578 ZNF280AP59817 542 aaPredicted RBP15.81■□□□□ 0.12
LIMS2-210ENST00000413578 DCPSQ96C86 337 aaKnown RBP15.81■□□□□ 0.12
LIMS2-210ENST00000413578 PHAXQ9H814 394 aaKnown RBP15.81■□□□□ 0.12
LIMS2-210ENST00000413578 GGA3Q9NZ52 723 aa15.81■□□□□ 0.12
LIMS2-210ENST00000413578 DGKZQ13574 1117 aa15.8■□□□□ 0.12
LIMS2-210ENST00000413578 C2orf69Q8N8R5 385 aa15.8■□□□□ 0.12
LIMS2-210ENST00000413578 CCDC102AQ96A19 550 aa15.8■□□□□ 0.12
LIMS2-210ENST00000413578 ZC3H12CQ9C0D7 883 aaKnown RBP15.8■□□□□ 0.12
LIMS2-210ENST00000413578 SCN9AQ15858 1988 aa15.8■□□□□ 0.12
LIMS2-210ENST00000413578 UFL1O94874 794 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 PCCAP05165 728 aaPredicted RBP15.79■□□□□ 0.12
LIMS2-210ENST00000413578 SLC10A3P09131 477 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 KIF23Q02241 960 aaPredicted RBP15.79■□□□□ 0.12
LIMS2-210ENST00000413578 GOLGA2Q08379 1002 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
LIMS2-210ENST00000413578 RBM26Q5T8P6 1007 aaKnown RBP15.79■□□□□ 0.12
LIMS2-210ENST00000413578 CCDC191Q8NCU4 936 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 AGBL3Q8NEM8 1001 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 GMLQ99445 158 aa15.79■□□□□ 0.12
LIMS2-210ENST00000413578 RSBN1LQ6PCB5 846 aaPredicted RBP15.78■□□□□ 0.12
LIMS2-210ENST00000413578 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
LIMS2-210ENST00000413578 SULF1Q8IWU6 871 aa15.78■□□□□ 0.12
LIMS2-210ENST00000413578 IFT57Q9NWB7 429 aa15.78■□□□□ 0.12
LIMS2-210ENST00000413578 GGA1Q9UJY5 639 aa15.78■□□□□ 0.12
LIMS2-210ENST00000413578 CASP8AP2Q9UKL3 1982 aa15.78■□□□□ 0.12
LIMS2-210ENST00000413578 PDE8AO60658 829 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 HSP90B1P14625 803 aaKnown RBP15.77■□□□□ 0.12
LIMS2-210ENST00000413578 ZNF157P51786 506 aaPredicted RBP15.77■□□□□ 0.12
LIMS2-210ENST00000413578 DDX10Q13206 875 aaKnown RBP15.77■□□□□ 0.12
LIMS2-210ENST00000413578 CCDC152Q4G0S7 254 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 CDCA5Q96FF9 252 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 MYD88Q99836 296 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 RNF186Q9NXI6 227 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
LIMS2-210ENST00000413578 ANGEL2Q5VTE6 544 aaKnown RBP15.76■□□□□ 0.11
LIMS2-210ENST00000413578 CSRNP1Q96S65 589 aa15.76■□□□□ 0.11
LIMS2-210ENST00000413578 METTL22Q9BUU2 404 aaPredicted RBP15.76■□□□□ 0.11
LIMS2-210ENST00000413578 XDHP47989 1333 aa15.75■□□□□ 0.11
LIMS2-210ENST00000413578 FKBP1BP68106 108 aa15.75■□□□□ 0.11
LIMS2-210ENST00000413578 SCARF1Q14162 830 aa15.75■□□□□ 0.11
LIMS2-210ENST00000413578 RASAL3Q86YV0 1011 aa15.75■□□□□ 0.11
LIMS2-210ENST00000413578 CWC25Q9NXE8 425 aaPredicted RBP15.75■□□□□ 0.11
LIMS2-210ENST00000413578 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 TRPA1O75762 1119 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 GNAI1P63096 354 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 PODNQ7Z5L7 613 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 C8orf58Q8NAV2 365 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 JARID2Q92833 1246 aaPredicted RBP15.74■□□□□ 0.11
LIMS2-210ENST00000413578 MYOZ2Q9NPC6 264 aa15.74■□□□□ 0.11
LIMS2-210ENST00000413578 WTIPA6NIX2 430 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-210ENST00000413578 ELL2O00472 640 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-210ENST00000413578 APAF1O14727 1248 aa15.73■□□□□ 0.11
LIMS2-210ENST00000413578 IGKV5-2P06315 115 aa15.73■□□□□ 0.11
LIMS2-210ENST00000413578 USP17L8P0C7I0 530 aa15.73■□□□□ 0.11
LIMS2-210ENST00000413578 ANKRD18AQ8IVF6 992 aa15.73■□□□□ 0.11
LIMS2-210ENST00000413578 CCDC85AQ96PX6 553 aaPredicted RBP15.73■□□□□ 0.11
LIMS2-210ENST00000413578 USP17L3A6NCW0 530 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 USP17L4A6NCW7 530 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 CTSWP56202 376 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
LIMS2-210ENST00000413578 USP17L1Q7RTZ2 530 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 PRKRIP1Q9H875 184 aaPredicted RBP15.72■□□□□ 0.11
LIMS2-210ENST00000413578 POLR2AP24928 1970 aaKnown RBP15.72■□□□□ 0.11
LIMS2-210ENST00000413578 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
LIMS2-210ENST00000413578 PSME4Q14997 1843 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 G3V3G9 751 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 DCAF8Q5TAQ9 597 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 REM2Q8IYK8 340 aaPredicted RBP15.71■□□□□ 0.11
LIMS2-210ENST00000413578 TTLL11Q8NHH1 800 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 BSDC1Q9NW68 430 aaPredicted RBP15.71■□□□□ 0.11
LIMS2-210ENST00000413578 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 PAPPA2Q9BXP8 1791 aa15.71■□□□□ 0.11
LIMS2-210ENST00000413578 DDX58O95786 925 aaKnown RBP15.7■□□□□ 0.1
LIMS2-210ENST00000413578 DACT2Q5SW24 774 aa15.7■□□□□ 0.1
LIMS2-210ENST00000413578 CCDC30Q5VVM6 783 aa15.7■□□□□ 0.1
LIMS2-210ENST00000413578 TSPYL6Q8N831 410 aa15.7■□□□□ 0.1
LIMS2-210ENST00000413578 CDC5LQ99459 802 aaKnown RBP15.7■□□□□ 0.1
LIMS2-210ENST00000413578 MAP3K2Q9Y2U5 619 aa15.7■□□□□ 0.1
LIMS2-210ENST00000413578 NBPF9Q3BBW0 867 aa15.69■□□□□ 0.1
LIMS2-210ENST00000413578 KSR2Q6VAB6 950 aa15.69■□□□□ 0.1
LIMS2-210ENST00000413578 MOB2Q70IA6 237 aa15.69■□□□□ 0.1
LIMS2-210ENST00000413578 CTU1Q7Z7A3 348 aaKnown RBP15.69■□□□□ 0.1
LIMS2-210ENST00000413578 GREM2Q9H772 168 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms