RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
CPNE1-206ENST00000412056 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
CPNE1-206ENST00000412056 GNAI2P04899 355 aa17.46■□□□□ 0.39
CPNE1-206ENST00000412056 YY1P25490 414 aa17.46■□□□□ 0.39
CPNE1-206ENST00000412056 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.39
CPNE1-206ENST00000412056 PDE3AQ14432 1141 aa17.46■□□□□ 0.39
CPNE1-206ENST00000412056 RTFDC1Q9BY42 306 aaPredicted RBP17.46■□□□□ 0.39
CPNE1-206ENST00000412056 C1orf115Q9H7X2 142 aa17.46■□□□□ 0.39
CPNE1-206ENST00000412056 RFX5P48382 616 aaPredicted RBP17.45■□□□□ 0.38
CPNE1-206ENST00000412056 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
CPNE1-206ENST00000412056 PUS3Q9BZE2 481 aaKnown RBP17.45■□□□□ 0.38
CPNE1-206ENST00000412056 XDHP47989 1333 aa17.45■□□□□ 0.38
CPNE1-206ENST00000412056 SUPT20HQ8NEM7 779 aa17.44■□□□□ 0.38
CPNE1-206ENST00000412056 GPR101Q96P66 508 aaPredicted RBP17.44■□□□□ 0.38
CPNE1-206ENST00000412056 PODXL2Q9NZ53 605 aa17.44■□□□□ 0.38
CPNE1-206ENST00000412056 ANKIB1Q9P2G1 1089 aa17.44■□□□□ 0.38
CPNE1-206ENST00000412056 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
CPNE1-206ENST00000412056 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 PPIP5K2O43314 1243 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 UFL1O94874 794 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 CHRNDQ07001 517 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 MTX1Q13505 466 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 AOC3Q16853 763 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 LDHAL6AQ6ZMR3 332 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 TBC1D16Q8TBP0 767 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 CNNM1Q9NRU3 951 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 GGA1Q9UJY5 639 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 DDX19BQ9UMR2 479 aa17.43■□□□□ 0.38
CPNE1-206ENST00000412056 WTIPA6NIX2 430 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-206ENST00000412056 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
CPNE1-206ENST00000412056 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
CPNE1-206ENST00000412056 HELBQ8NG08 1087 aaPredicted RBP17.42■□□□□ 0.38
CPNE1-206ENST00000412056 GOLGB1Q14789 3259 aaKnown RBP17.42■□□□□ 0.38
CPNE1-206ENST00000412056 SCN9AQ15858 1988 aa17.42■□□□□ 0.38
CPNE1-206ENST00000412056 PNMA6EA0A0J9YXQ4 647 aa17.41■□□□□ 0.38
CPNE1-206ENST00000412056 SRGAP3O43295 1099 aa17.41■□□□□ 0.38
CPNE1-206ENST00000412056 ATP2B4P23634 1241 aa17.41■□□□□ 0.38
CPNE1-206ENST00000412056 PTPN12Q05209 780 aaKnown RBP17.41■□□□□ 0.38
CPNE1-206ENST00000412056 KIAA2012Q0VF49 1180 aa17.41■□□□□ 0.38
CPNE1-206ENST00000412056 PA2G4Q9UQ80 394 aaKnown RBP17.41■□□□□ 0.38
CPNE1-206ENST00000412056 PSME4Q14997 1843 aa17.41■□□□□ 0.38
CPNE1-206ENST00000412056 TAF5LO75529 589 aa17.4■□□□□ 0.38
CPNE1-206ENST00000412056 ANKRD2Q9GZV1 360 aa17.4■□□□□ 0.38
CPNE1-206ENST00000412056 RIPOR2Q9Y4F9 1068 aa17.4■□□□□ 0.38
CPNE1-206ENST00000412056 SNAP23O00161 211 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 RIMBP2O15034 1052 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 EYA3Q99504 573 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 SIL1Q9H173 461 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 ZBTB40Q9NUA8 1239 aa17.39■□□□□ 0.37
CPNE1-206ENST00000412056 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
CPNE1-206ENST00000412056 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
CPNE1-206ENST00000412056 EYA2O00167 538 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 ATP8B2P98198 1209 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 NIM1KQ8IY84 436 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 LEMD3Q9Y2U8 911 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 SUPT16HQ9Y5B9 1047 aaKnown RBP17.38■□□□□ 0.37
CPNE1-206ENST00000412056 ZNF804BA4D1E1 1349 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 ZNF541Q9H0D2 1346 aa17.38■□□□□ 0.37
CPNE1-206ENST00000412056 KLRK1P26718 216 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 POLA2Q14181 598 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 METTL24Q5JXM2 366 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 CEP85Q6P2H3 762 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 ATG9AQ7Z3C6 839 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 ZNF526Q8TF50 670 aaPredicted RBP17.37■□□□□ 0.37
CPNE1-206ENST00000412056 COPRSQ9NQ92 184 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 MROH5Q6ZUA9 1318 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 MED23Q9ULK4 1368 aa17.37■□□□□ 0.37
CPNE1-206ENST00000412056 ARAP2Q8WZ64 1704 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 FZD9O00144 591 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 KCNJ4P48050 445 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 TXNRD3Q86VQ6 643 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 CRBNQ96SW2 442 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 ZC3H12CQ9C0D7 883 aaKnown RBP17.36■□□□□ 0.37
CPNE1-206ENST00000412056 CHMP4BQ9H444 224 aaKnown RBP17.36■□□□□ 0.37
CPNE1-206ENST00000412056 DBNDD1Q9H9R9 158 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 MYH13Q9UKX3 1938 aa17.36■□□□□ 0.37
CPNE1-206ENST00000412056 WDR90Q96KV7 1748 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 CIAO1O76071 339 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 DOK7Q18PE1 504 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 ZNF784Q8NCA9 323 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-206ENST00000412056 SSH3Q8TE77 659 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 FBXO3Q9UK99 471 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 IRS2Q9Y4H2 1338 aa17.35■□□□□ 0.37
CPNE1-206ENST00000412056 GLTPD2A6NH11 291 aa17.34■□□□□ 0.37
CPNE1-206ENST00000412056 ECE2O60344 883 aa17.34■□□□□ 0.37
CPNE1-206ENST00000412056 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
CPNE1-206ENST00000412056 DDNO94850 711 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-206ENST00000412056 PDE8BO95263 885 aa17.33■□□□□ 0.36
CPNE1-206ENST00000412056 EIF6P56537 245 aaKnown RBP17.33■□□□□ 0.36
CPNE1-206ENST00000412056 UBE4AQ14139 1066 aa17.33■□□□□ 0.36
CPNE1-206ENST00000412056 SCN4AP35499 1836 aa17.33■□□□□ 0.36
CPNE1-206ENST00000412056 G3V3G9 751 aa17.32■□□□□ 0.36
CPNE1-206ENST00000412056 IL15P40933 162 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-206ENST00000412056 DCAF8Q5TAQ9 597 aa17.32■□□□□ 0.36
CPNE1-206ENST00000412056 C15orf52Q6ZUT6 534 aaKnown RBP17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms