RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SETDB2Q96T68 719 aa8.78□□□□□ -1
LINC00396-201ENST00000411690 SAGE1Q9NXZ1 904 aa8.78□□□□□ -1
LINC00396-201ENST00000411690 V9GY48 417 aaPredicted RBP8.78□□□□□ -1
LINC00396-201ENST00000411690 ANKRD26Q9UPS8 1709 aa8.77□□□□□ -1
LINC00396-201ENST00000411690 C3orf80F5H4A9 247 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 NPR1P16066 1061 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 SCNN1DP51172 638 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 EIF5P55010 431 aaKnown RBP8.77□□□□□ -1.01
LINC00396-201ENST00000411690 SLC39A6Q13433 755 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 CAMK2BQ13554 666 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 OLFM4Q6UX06 510 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 ZNF408Q9H9D4 720 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 POLKQ9UBT6 870 aa8.77□□□□□ -1.01
LINC00396-201ENST00000411690 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
LINC00396-201ENST00000411690 TRPA1O75762 1119 aa8.76□□□□□ -1.01
LINC00396-201ENST00000411690 FXR1P51114 621 aaKnown RBP eCLIP8.76□□□□□ -1.01
LINC00396-201ENST00000411690 SLC52A2Q9HAB3 445 aa8.76□□□□□ -1.01
LINC00396-201ENST00000411690 FAM198AQ9UFP1 575 aa8.76□□□□□ -1.01
LINC00396-201ENST00000411690 TBC1D2BQ9UPU7 963 aa8.76□□□□□ -1.01
LINC00396-201ENST00000411690 ZNF330Q9Y3S2 320 aaPredicted RBP8.76□□□□□ -1.01
LINC00396-201ENST00000411690 STARD3NLO95772 234 aa8.75□□□□□ -1.01
LINC00396-201ENST00000411690 PKN2Q16513 984 aaKnown RBP8.75□□□□□ -1.01
LINC00396-201ENST00000411690 PACS2Q86VP3 889 aa8.75□□□□□ -1.01
LINC00396-201ENST00000411690 VSIG10Q8N0Z9 540 aa8.75□□□□□ -1.01
LINC00396-201ENST00000411690 GLIS2Q9BZE0 524 aaPredicted RBP8.75□□□□□ -1.01
LINC00396-201ENST00000411690 IL21Q9HBE4 155 aa8.75□□□□□ -1.01
LINC00396-201ENST00000411690 ADARB2Q9NS39 739 aaKnown RBP8.75□□□□□ -1.01
LINC00396-201ENST00000411690 RNF186Q9NXI6 227 aa8.75□□□□□ -1.01
LINC00396-201ENST00000411690 ALDH1B1P30837 517 aa8.74□□□□□ -1.01
LINC00396-201ENST00000411690 HUNKP57058 714 aa8.74□□□□□ -1.01
LINC00396-201ENST00000411690 KIF23Q02241 960 aaPredicted RBP8.74□□□□□ -1.01
LINC00396-201ENST00000411690 NPM2Q86SE8 214 aaKnown RBP8.74□□□□□ -1.01
LINC00396-201ENST00000411690 NKX2-3Q8TAU0 364 aa8.74□□□□□ -1.01
LINC00396-201ENST00000411690 PSMD1Q99460 953 aa8.74□□□□□ -1.01
LINC00396-201ENST00000411690 CARD14Q9BXL6 1004 aa8.74□□□□□ -1.01
LINC00396-201ENST00000411690 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.74□□□□□ -1.01
LINC00396-201ENST00000411690 NBR1Q14596 966 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 RGMBQ6NW40 437 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 CDC37L1Q7L3B6 337 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 NBPF5PQ86XG9 351 aaPredicted RBP8.73□□□□□ -1.01
LINC00396-201ENST00000411690 LARGE2Q8N3Y3 721 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 CCDC102AQ96A19 550 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 LGR6Q9HBX8 967 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 GPRC5DQ9NZD1 345 aa8.73□□□□□ -1.01
LINC00396-201ENST00000411690 KLRG2A4D1S0 409 aaPredicted RBP8.72□□□□□ -1.01
LINC00396-201ENST00000411690 FAM155AB1AL88 458 aaPredicted RBP8.72□□□□□ -1.01
LINC00396-201ENST00000411690 MAP3K7O43318 606 aa8.72□□□□□ -1.01
LINC00396-201ENST00000411690 TNNT2P45379 298 aaPredicted RBP8.72□□□□□ -1.01
LINC00396-201ENST00000411690 AEBP1Q8IUX7 1158 aa8.72□□□□□ -1.01
LINC00396-201ENST00000411690 PGAP2Q9UHJ9 254 aa8.72□□□□□ -1.01
LINC00396-201ENST00000411690 HDAC9Q9UKV0 1011 aa8.72□□□□□ -1.01
LINC00396-201ENST00000411690 BCORQ6W2J9 1755 aa8.71□□□□□ -1.01
LINC00396-201ENST00000411690 SCN11AQ9UI33 1791 aa8.71□□□□□ -1.01
LINC00396-201ENST00000411690 RNMTO43148 476 aaKnown RBP8.71□□□□□ -1.02
LINC00396-201ENST00000411690 CAMTA2O94983 1202 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 IL6STP40189 918 aaPredicted RBP8.71□□□□□ -1.02
LINC00396-201ENST00000411690 CC2D2BQ6DHV5 1058 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 TPTE2Q6XPS3 522 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 NIM1KQ8IY84 436 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 TTC5Q8N0Z6 440 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 SLC17A8Q8NDX2 589 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 ZC3H15Q8WU90 426 aaKnown RBP8.71□□□□□ -1.02
LINC00396-201ENST00000411690 SCN7AQ01118 1682 aa8.71□□□□□ -1.02
LINC00396-201ENST00000411690 COL4A5P29400 1685 aa8.7□□□□□ -1.02
LINC00396-201ENST00000411690 ZNF157P51786 506 aaPredicted RBP8.7□□□□□ -1.02
LINC00396-201ENST00000411690 SULT6B1Q6IMI4 303 aa8.7□□□□□ -1.02
LINC00396-201ENST00000411690 C2orf69Q8N8R5 385 aa8.7□□□□□ -1.02
LINC00396-201ENST00000411690 CDCA7LQ96GN5 454 aa8.7□□□□□ -1.02
LINC00396-201ENST00000411690 CSRNP1Q96S65 589 aa8.7□□□□□ -1.02
LINC00396-201ENST00000411690 TEX13AQ9BXU3 409 aaPredicted RBP8.7□□□□□ -1.02
LINC00396-201ENST00000411690 HIRAP54198 1017 aaPredicted RBP8.69□□□□□ -1.02
LINC00396-201ENST00000411690 GRIPAP1Q4V328 841 aa8.69□□□□□ -1.02
LINC00396-201ENST00000411690 CDCA8Q53HL2 280 aa8.69□□□□□ -1.02
LINC00396-201ENST00000411690 USP48Q86UV5 1035 aa8.69□□□□□ -1.02
LINC00396-201ENST00000411690 DZIP3Q86Y13 1208 aaKnown RBP8.69□□□□□ -1.02
LINC00396-201ENST00000411690 GBA2Q9HCG7 927 aaPredicted RBP8.69□□□□□ -1.02
LINC00396-201ENST00000411690 SNED1Q8TER0 1413 aa8.69□□□□□ -1.02
LINC00396-201ENST00000411690 GTF2E1P29083 439 aaPredicted RBP8.68□□□□□ -1.02
LINC00396-201ENST00000411690 CXCL9Q07325 125 aa8.68□□□□□ -1.02
LINC00396-201ENST00000411690 FBXO46Q6PJ61 603 aaPredicted RBP8.68□□□□□ -1.02
LINC00396-201ENST00000411690 CLEC4GQ6UXB4 293 aa8.68□□□□□ -1.02
LINC00396-201ENST00000411690 TRIM67Q6ZTA4 783 aa8.68□□□□□ -1.02
LINC00396-201ENST00000411690 ZNF296Q8WUU4 475 aaPredicted RBP8.68□□□□□ -1.02
LINC00396-201ENST00000411690 BCL2L13Q9BXK5 485 aa8.68□□□□□ -1.02
LINC00396-201ENST00000411690 AKAP11Q9UKA4 1901 aa8.68□□□□□ -1.02
LINC00396-201ENST00000411690 FAM177BA6PVY3 158 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 PPIP5K2O43314 1243 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 RNF40O75150 1001 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 A1BGP04217 495 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 MRC1P22897 1456 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 GMPSP49915 693 aaPredicted RBP8.67□□□□□ -1.02
LINC00396-201ENST00000411690 PRSS12P56730 875 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 DLK2Q6UY11 383 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 ZNF496Q96IT1 587 aaPredicted RBP8.67□□□□□ -1.02
LINC00396-201ENST00000411690 NPC1L1Q9UHC9 1359 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 ZNF652Q9Y2D9 606 aa8.67□□□□□ -1.02
LINC00396-201ENST00000411690 HEG1Q9ULI3 1381 aa8.66□□□□□ -1.02
LINC00396-201ENST00000411690 CDHR2Q9BYE9 1310 aa8.66□□□□□ -1.02
LINC00396-201ENST00000411690 TBC1D8O95759 1140 aa8.66□□□□□ -1.02
LINC00396-201ENST00000411690 SLC10A3P09131 477 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms