RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
TTC39A-207ENST00000411642 IARSP41252 1262 aaKnown RBP12.59□□□□□ -0.39
TTC39A-207ENST00000411642 RRP1P56182 461 aaKnown RBP12.59□□□□□ -0.39
TTC39A-207ENST00000411642 PDE3AQ14432 1141 aa12.59□□□□□ -0.39
TTC39A-207ENST00000411642 C20orf194Q5TEA3 1177 aa12.59□□□□□ -0.39
TTC39A-207ENST00000411642 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
TTC39A-207ENST00000411642 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
TTC39A-207ENST00000411642 XDHP47989 1333 aa12.59□□□□□ -0.39
TTC39A-207ENST00000411642 COL4A5P29400 1685 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 ZBTB7BO15156 539 aaPredicted RBP12.58□□□□□ -0.4
TTC39A-207ENST00000411642 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 RTFDC1Q9BY42 306 aaPredicted RBP12.58□□□□□ -0.4
TTC39A-207ENST00000411642 C1orf115Q9H7X2 142 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 CNNM1Q9NRU3 951 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 PODXL2Q9NZ53 605 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 MINPP1Q9UNW1 487 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 PSME4Q14997 1843 aa12.58□□□□□ -0.4
TTC39A-207ENST00000411642 C6orf229H3BNL8 230 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 PPIP5K2O43314 1243 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 UFL1O94874 794 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 AOC3Q16853 763 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 KLHDC4Q8TBB5 520 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 TBC1D16Q8TBP0 767 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 POLLQ9UGP5 575 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 GGA1Q9UJY5 639 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 SCN9AQ15858 1988 aa12.57□□□□□ -0.4
TTC39A-207ENST00000411642 ZC3H4Q9UPT8 1303 aaKnown RBP12.57□□□□□ -0.4
TTC39A-207ENST00000411642 SRGAP3O43295 1099 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 RFX5P48382 616 aaPredicted RBP12.56□□□□□ -0.4
TTC39A-207ENST00000411642 CHRNDQ07001 517 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 MTX1Q13505 466 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 LARGE2Q8N3Y3 721 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 GPR101Q96P66 508 aaPredicted RBP12.56□□□□□ -0.4
TTC39A-207ENST00000411642 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
TTC39A-207ENST00000411642 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 MYH13Q9UKX3 1938 aa12.56□□□□□ -0.4
TTC39A-207ENST00000411642 PTPN12Q05209 780 aaKnown RBP12.55□□□□□ -0.4
TTC39A-207ENST00000411642 KIAA2012Q0VF49 1180 aa12.55□□□□□ -0.4
TTC39A-207ENST00000411642 WASHC4Q2M389 1173 aa12.55□□□□□ -0.4
TTC39A-207ENST00000411642 HELBQ8NG08 1087 aaPredicted RBP12.55□□□□□ -0.4
TTC39A-207ENST00000411642 JDP2Q8WYK2 163 aa12.55□□□□□ -0.4
TTC39A-207ENST00000411642 EYA3Q99504 573 aa12.55□□□□□ -0.4
TTC39A-207ENST00000411642 VPS33BQ9H267 617 aa12.55□□□□□ -0.4
TTC39A-207ENST00000411642 PNMA6EA0A0J9YXQ4 647 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 RIMBP2O15034 1052 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 TAF5LO75529 589 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 KCNJ4P48050 445 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 NIM1KQ8IY84 436 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 SIL1Q9H173 461 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 CHMP4BQ9H444 224 aaKnown RBP12.54□□□□□ -0.4
TTC39A-207ENST00000411642 PA2G4Q9UQ80 394 aaKnown RBP12.54□□□□□ -0.4
TTC39A-207ENST00000411642 RIPOR2Q9Y4F9 1068 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 MROH5Q6ZUA9 1318 aa12.54□□□□□ -0.4
TTC39A-207ENST00000411642 WTIPA6NIX2 430 aaPredicted RBP12.53□□□□□ -0.4
TTC39A-207ENST00000411642 EYA2O00167 538 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 METTL24Q5JXM2 366 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ZNF526Q8TF50 670 aaPredicted RBP12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
TTC39A-207ENST00000411642 COPRSQ9NQ92 184 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ZBTB40Q9NUA8 1239 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 LEMD3Q9Y2U8 911 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ZNF804BA4D1E1 1349 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ARAP2Q8WZ64 1704 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 MED23Q9ULK4 1368 aa12.53□□□□□ -0.4
TTC39A-207ENST00000411642 ZNF646O15015 1829 aaPredicted RBP12.53□□□□□ -0.4
TTC39A-207ENST00000411642 WDR90Q96KV7 1748 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 FZD9O00144 591 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 SNAP23O00161 211 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 ATP8B2P98198 1209 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 CEP85Q6P2H3 762 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 DBNDD1Q9H9R9 158 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
TTC39A-207ENST00000411642 SCN4AP35499 1836 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
TTC39A-207ENST00000411642 G3V3G9 751 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 CIAO1O76071 339 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 KLRK1P26718 216 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 EIF6P56537 245 aaKnown RBP12.51□□□□□ -0.41
TTC39A-207ENST00000411642 POLA2Q14181 598 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 DOK7Q18PE1 504 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 DCAF8Q5TAQ9 597 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 ATG9AQ7Z3C6 839 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 ZNF784Q8NCA9 323 aaPredicted RBP12.51□□□□□ -0.41
TTC39A-207ENST00000411642 SSH3Q8TE77 659 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
TTC39A-207ENST00000411642 GLTPD2A6NH11 291 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 ECE2O60344 883 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 PDE8BO95263 885 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 IL15P40933 162 aaPredicted RBP12.5□□□□□ -0.41
TTC39A-207ENST00000411642 DPY19L2Q6NUT2 758 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 VGLL2Q8N8G2 317 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 CRBNQ96SW2 442 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
TTC39A-207ENST00000411642 YDJCA8MPS7 323 aa12.49□□□□□ -0.41
TTC39A-207ENST00000411642 DDNO94850 711 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms