RNA–Protein interactions for RNA: ENST00000411409.1

RN7SKP3-201, Transcript of RNA, 7SK small nuclear pseudogene 3, humanhuman

BASIC

Gene RN7SKP3, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP3-201ENST00000411409 ANKRD2Q9GZV1 360 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 GREM2Q9H772 168 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 COPRSQ9NQ92 184 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 TNNQ9UQP3 1299 aa11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 LRRFIP2Q9Y608 721 aaKnown RBP11.79□□□□□ -0.52
RN7SKP3-201ENST00000411409 GOLGB1Q14789 3259 aaKnown RBP11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 TNRC6CQ9HCJ0 1690 aaKnown RBP11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 PPEF1O14829 653 aaPredicted RBP11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 CCDC93Q567U6 631 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 HSP90AB4PQ58FF6 505 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 TAF7LQ5H9L4 462 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 C20orf194Q5TEA3 1177 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 C3orf67Q6ZVT6 689 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 CCDC24Q8N4L8 307 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 SUPT20HQ8NEM7 779 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 SSH3Q8TE77 659 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 ZNF526Q8TF50 670 aaPredicted RBP11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 PODXL2Q9NZ53 605 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 WWC3Q9ULE0 1092 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 MROH5Q6ZUA9 1318 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 LTBP3Q9NS15 1303 aa11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 BRCA1P38398 1863 aaKnown RBP11.78□□□□□ -0.52
RN7SKP3-201ENST00000411409 SRGAP3O43295 1099 aa11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 FAM161AQ3B820 660 aa11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 EPHA10Q5JZY3 1008 aa11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 REM2Q8IYK8 340 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 JARID2Q92833 1246 aaPredicted RBP11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 PSMD1Q99460 953 aa11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 CHMP3Q9Y3E7 222 aa11.77□□□□□ -0.53
RN7SKP3-201ENST00000411409 ARFGEF1Q9Y6D6 1849 aa11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 IL15P40933 162 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 CEP85Q6P2H3 762 aa11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 LDHAL6AQ6ZMR3 332 aa11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 RTFDC1Q9BY42 306 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 BCS1LQ9Y276 419 aa11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 LEMD3Q9Y2U8 911 aa11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 NOP58Q9Y2X3 529 aaKnown RBP11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 COL11A2P13942 1736 aaPredicted RBP11.76□□□□□ -0.53
RN7SKP3-201ENST00000411409 ECM2O94769 699 aaPredicted RBP11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 RFX5P48382 616 aaPredicted RBP11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 PTPN12Q05209 780 aaKnown RBP11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 ERC1Q8IUD2 1116 aa11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 CELF1Q92879 486 aaKnown RBP11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 XDHP47989 1333 aa11.75□□□□□ -0.53
RN7SKP3-201ENST00000411409 EYA2O00167 538 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 NEFLP07196 543 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 ATP2B4P23634 1241 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 MPNDQ8N594 471 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 EYA3Q99504 573 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 CNNM1Q9NRU3 951 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 MINPP1Q9UNW1 487 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 RIPOR2Q9Y4F9 1068 aa11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
RN7SKP3-201ENST00000411409 LRRC37AA6NMS7 1700 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 C21orf2O43822 256 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 RAB11FIP3O75154 756 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 FKBP4Q02790 459 aaKnown RBP eCLIP11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 HDAC1Q13547 482 aaPredicted RBP11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 UBE4AQ14139 1066 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 DPP8Q6V1X1 898 aaPredicted RBP11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 C15orf52Q6ZUT6 534 aaKnown RBP11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 CRBNQ96SW2 442 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 TAOK3Q9H2K8 898 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 AKAP2Q9Y2D5 859 aa11.73□□□□□ -0.53
RN7SKP3-201ENST00000411409 SNED1Q8TER0 1413 aa11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 HSPA6P17066 643 aa11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 G3BP1Q13283 466 aaKnown RBP eCLIP11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 CCDC85AQ96PX6 553 aaPredicted RBP11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 GPR108Q9NPR9 543 aa11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 ANKIB1Q9P2G1 1089 aa11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 SLX4Q8IY92 1834 aa11.72□□□□□ -0.53
RN7SKP3-201ENST00000411409 PNMA6EA0A0J9YXQ4 647 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 PDE8BO95263 885 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 CHRNDQ07001 517 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 GCC1Q96CN9 775 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 RWDD1Q9H446 243 aaPredicted RBP11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 GGA1Q9UJY5 639 aa11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 NSFL1CQ9UNZ2 370 aaKnown RBP11.71□□□□□ -0.53
RN7SKP3-201ENST00000411409 SURF6O75683 361 aaKnown RBP11.7□□□□□ -0.54
RN7SKP3-201ENST00000411409 LMNB1P20700 586 aa11.7□□□□□ -0.54
RN7SKP3-201ENST00000411409 TBC1D16Q8TBP0 767 aa11.7□□□□□ -0.54
RN7SKP3-201ENST00000411409 DCTPP1Q9H773 170 aa11.7□□□□□ -0.54
RN7SKP3-201ENST00000411409 CLEC11AQ9Y240 323 aa11.7□□□□□ -0.54
RN7SKP3-201ENST00000411409 MED23Q9ULK4 1368 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 ZNF804BA4D1E1 1349 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 IGSF3O75054 1194 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 MMP14P50281 582 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 KIAA2012Q0VF49 1180 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 PUM3Q15397 648 aaKnown RBP11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 METTL24Q5JXM2 366 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 ARHGAP27Q6ZUM4 889 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 ATG9AQ7Z3C6 839 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 SIRT2Q8IXJ6 389 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 LPIN2Q92539 896 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 KIF1BPQ96EK5 621 aa11.69□□□□□ -0.54
RN7SKP3-201ENST00000411409 ZC3H12CQ9C0D7 883 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms