RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 PLCB2Q00722 1185 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 STK3Q13188 491 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 MPNDQ8N594 471 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 BRF1Q92994 677 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 CBX8Q9HC52 389 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 ARFGEF2Q9Y6D5 1785 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 CAMK4Q16566 473 aa19.69■□□□□ 0.74
LIMS2-208ENST00000410011 DHX32Q7L7V1 743 aaKnown RBP19.69■□□□□ 0.74
LIMS2-208ENST00000410011 JAK2O60674 1132 aa19.68■□□□□ 0.74
LIMS2-208ENST00000410011 AFDNP55196 1824 aaKnown RBP19.68■□□□□ 0.74
LIMS2-208ENST00000410011 ANO6Q4KMQ2 910 aa19.68■□□□□ 0.74
LIMS2-208ENST00000410011 PLA2G4DQ86XP0 818 aa19.68■□□□□ 0.74
LIMS2-208ENST00000410011 KIF3AQ9Y496 699 aa19.68■□□□□ 0.74
LIMS2-208ENST00000410011 PKD1L3Q7Z443 1732 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 H3BQV1 296 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 CYP27B1O15528 508 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 FOXO4P98177 505 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 EXOSC10Q01780 885 aaKnown RBP19.67■□□□□ 0.74
LIMS2-208ENST00000410011 SCRN1Q12765 414 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 IFFO2Q5TF58 517 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 VSIG10Q8N0Z9 540 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 FBXL16Q8N461 479 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 RCOR1Q9UKL0 485 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 CTAGE5O15320 804 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 NR1I2O75469 434 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 LUZP1Q86V48 1076 aa19.67■□□□□ 0.74
LIMS2-208ENST00000410011 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
LIMS2-208ENST00000410011 DNAJC2Q99543 621 aaKnown RBP19.67■□□□□ 0.74
LIMS2-208ENST00000410011 ATG3Q9NT62 314 aa19.66■□□□□ 0.74
LIMS2-208ENST00000410011 PYCARDQ9ULZ3 195 aa19.66■□□□□ 0.74
LIMS2-208ENST00000410011 LAMB4A4D0S4 1761 aa19.66■□□□□ 0.74
LIMS2-208ENST00000410011 ADD1P35611 737 aaKnown RBP19.65■□□□□ 0.74
LIMS2-208ENST00000410011 LMBR1LQ6UX01 489 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 CKAP2LQ8IYA6 745 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 SEC62Q99442 399 aaKnown RBP19.65■□□□□ 0.74
LIMS2-208ENST00000410011 CHMP3Q9Y3E7 222 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 IL15P40933 162 aaPredicted RBP19.65■□□□□ 0.74
LIMS2-208ENST00000410011 ZMYM1Q5SVZ6 1142 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 CCDC129Q6ZRS4 1044 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 ATG9AQ7Z3C6 839 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 NSUN7Q8NE18 718 aaKnown RBP19.65■□□□□ 0.74
LIMS2-208ENST00000410011 BICD2Q8TD16 824 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.65■□□□□ 0.74
LIMS2-208ENST00000410011 GLI3P10071 1580 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 ADAMTSL3P82987 1691 aa19.65■□□□□ 0.74
LIMS2-208ENST00000410011 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.74
LIMS2-208ENST00000410011 CDC25BP30305 580 aa19.64■□□□□ 0.74
LIMS2-208ENST00000410011 STOX1Q6ZVD7 989 aa19.64■□□□□ 0.74
LIMS2-208ENST00000410011 C17orf53Q8N3J3 647 aaPredicted RBP19.64■□□□□ 0.74
LIMS2-208ENST00000410011 PARP4Q9UKK3 1724 aaKnown RBP19.64■□□□□ 0.73
LIMS2-208ENST00000410011 ZNF165P49910 485 aa19.64■□□□□ 0.73
LIMS2-208ENST00000410011 ZNF75DP51815 510 aa19.64■□□□□ 0.73
LIMS2-208ENST00000410011 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
LIMS2-208ENST00000410011 SPC24Q8NBT2 197 aa19.64■□□□□ 0.73
LIMS2-208ENST00000410011 PAG1Q9NWQ8 432 aa19.64■□□□□ 0.73
LIMS2-208ENST00000410011 SPEF2Q9C093 1822 aa19.63■□□□□ 0.73
LIMS2-208ENST00000410011 ATP5J2-PTCD1G3V325 749 aa19.63■□□□□ 0.73
LIMS2-208ENST00000410011 PTCD1O75127 700 aaKnown RBP19.63■□□□□ 0.73
LIMS2-208ENST00000410011 CABP4P57796 275 aa19.63■□□□□ 0.73
LIMS2-208ENST00000410011 SARM1Q6SZW1 724 aa19.63■□□□□ 0.73
LIMS2-208ENST00000410011 ZNF274Q96GC6 653 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-208ENST00000410011 CHAF1AQ13111 956 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-208ENST00000410011 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
LIMS2-208ENST00000410011 SALL1Q9NSC2 1324 aa19.62■□□□□ 0.73
LIMS2-208ENST00000410011 CIAO1O76071 339 aa19.62■□□□□ 0.73
LIMS2-208ENST00000410011 EVCP57679 992 aa19.62■□□□□ 0.73
LIMS2-208ENST00000410011 CTDNEP1O95476 244 aa19.62■□□□□ 0.73
LIMS2-208ENST00000410011 NDUFB9Q9Y6M9 179 aa19.62■□□□□ 0.73
LIMS2-208ENST00000410011 DCCP43146 1447 aa19.61■□□□□ 0.73
LIMS2-208ENST00000410011 PTGS1P23219 599 aa19.61■□□□□ 0.73
LIMS2-208ENST00000410011 FGD1P98174 961 aa19.61■□□□□ 0.73
LIMS2-208ENST00000410011 CWC25Q9NXE8 425 aaPredicted RBP19.61■□□□□ 0.73
LIMS2-208ENST00000410011 CHGBP05060 677 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 CCDC186Q7Z3E2 898 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 ZNF396Q96N95 335 aaPredicted RBP19.6■□□□□ 0.73
LIMS2-208ENST00000410011 TRIM5Q9C035 493 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 CPDO75976 1380 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 LAMA4Q16363 1823 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 CSB-PGBD3P0DP91 1061 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 HSPD1P10809 573 aaKnown RBP19.6■□□□□ 0.73
LIMS2-208ENST00000410011 IQCB1Q15051 598 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 DDX11Q96FC9 970 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 CCDC94Q9BW85 323 aaPredicted RBP19.6■□□□□ 0.73
LIMS2-208ENST00000410011 ZMYND15Q9H091 742 aa19.6■□□□□ 0.73
LIMS2-208ENST00000410011 PTPDC1A2A3K4 754 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 NBPF26B4DH59 902 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 EYA2O00167 538 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 GOLIM4O00461 696 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 NBPF14Q5TI25 921 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 NBPF10Q6P3W6 841 aaKnown RBP19.59■□□□□ 0.73
LIMS2-208ENST00000410011 ZNF710Q8N1W2 664 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 NBPF15Q8N660 670 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 FBXO3Q9UK99 471 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 E7EWF7 191 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 RNF113AO15541 343 aaKnown RBP19.59■□□□□ 0.73
LIMS2-208ENST00000410011 CTIFO43310 598 aaKnown RBP19.59■□□□□ 0.73
LIMS2-208ENST00000410011 PIP4K2AP48426 406 aaPredicted RBP19.59■□□□□ 0.73
LIMS2-208ENST00000410011 RGS22Q8NE09 1264 aa19.59■□□□□ 0.73
LIMS2-208ENST00000410011 DNAJC25Q9H1X3 360 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms