RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 ALDH1B1P30837 517 aa20.61■□□□□ 0.89
GCFC2-202ENST00000409857 DDX46Q7L014 1031 aaKnown RBP20.61■□□□□ 0.89
GCFC2-202ENST00000409857 CNKSR1Q969H4 720 aa20.61■□□□□ 0.89
GCFC2-202ENST00000409857 GREM2Q9H772 168 aa20.61■□□□□ 0.89
GCFC2-202ENST00000409857 A0A0G2JLW4 131 aa20.6■□□□□ 0.89
GCFC2-202ENST00000409857 SPEF2Q9C093 1822 aa20.6■□□□□ 0.89
GCFC2-202ENST00000409857 ARFGEF1Q9Y6D6 1849 aa20.6■□□□□ 0.89
GCFC2-202ENST00000409857 NLGN2Q8NFZ4 835 aa20.6■□□□□ 0.89
GCFC2-202ENST00000409857 FOXD4L1Q9NU39 408 aa20.6■□□□□ 0.89
GCFC2-202ENST00000409857 CD2BP2O95400 341 aaKnown RBP20.59■□□□□ 0.89
GCFC2-202ENST00000409857 SLX4Q8IY92 1834 aa20.59■□□□□ 0.89
GCFC2-202ENST00000409857 LRRC37AA6NMS7 1700 aa20.59■□□□□ 0.89
GCFC2-202ENST00000409857 GRAPQ13588 217 aa20.59■□□□□ 0.89
GCFC2-202ENST00000409857 GRAPLQ8TC17 118 aaPredicted RBP20.59■□□□□ 0.89
GCFC2-202ENST00000409857 TNPO1Q92973 898 aaKnown RBP20.59■□□□□ 0.89
GCFC2-202ENST00000409857 KIF2CQ99661 725 aa20.59■□□□□ 0.89
GCFC2-202ENST00000409857 PIM2Q9P1W9 311 aa20.59■□□□□ 0.89
GCFC2-202ENST00000409857 ANKRD18BA2A2Z9 1011 aa20.58■□□□□ 0.89
GCFC2-202ENST00000409857 ITGA6P23229 1130 aa20.58■□□□□ 0.89
GCFC2-202ENST00000409857 IFIT5Q13325 482 aaKnown RBP20.58■□□□□ 0.89
GCFC2-202ENST00000409857 RPAP2Q8IXW5 612 aaPredicted RBP20.58■□□□□ 0.89
GCFC2-202ENST00000409857 ZNF622Q969S3 477 aaKnown RBP eCLIP20.58■□□□□ 0.89
GCFC2-202ENST00000409857 CDC5LQ99459 802 aaKnown RBP20.58■□□□□ 0.89
GCFC2-202ENST00000409857 COL4A1P02462 1669 aa20.58■□□□□ 0.88
GCFC2-202ENST00000409857 ATP8B2P98198 1209 aa20.58■□□□□ 0.88
GCFC2-202ENST00000409857 CCDC57Q2TAC2 916 aa20.58■□□□□ 0.88
GCFC2-202ENST00000409857 CEP85Q6P2H3 762 aa20.58■□□□□ 0.88
GCFC2-202ENST00000409857 SNX21Q969T3 373 aa20.58■□□□□ 0.88
GCFC2-202ENST00000409857 BMP2KLQ5H9B9 411 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 TMC4Q7Z404 712 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
GCFC2-202ENST00000409857 CHMP3Q9Y3E7 222 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 DDX11L8A8MPP1 907 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 BBOX1O75936 387 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 TTLL6Q8N841 843 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 SEC31BQ9NQW1 1179 aa20.57■□□□□ 0.88
GCFC2-202ENST00000409857 RFX5P48382 616 aaPredicted RBP20.56■□□□□ 0.88
GCFC2-202ENST00000409857 SIRT2Q8IXJ6 389 aa20.56■□□□□ 0.88
GCFC2-202ENST00000409857 SRGAP3O43295 1099 aa20.55■□□□□ 0.88
GCFC2-202ENST00000409857 RPS8P62241 208 aaKnown RBP20.55■□□□□ 0.88
GCFC2-202ENST00000409857 SSH3Q8TE77 659 aa20.55■□□□□ 0.88
GCFC2-202ENST00000409857 POLA2Q14181 598 aa20.55■□□□□ 0.88
GCFC2-202ENST00000409857 ANKRD18AQ8IVF6 992 aa20.55■□□□□ 0.88
GCFC2-202ENST00000409857 CELF1Q92879 486 aaKnown RBP20.55■□□□□ 0.88
GCFC2-202ENST00000409857 A0A1B0GUL6 1792 aa20.54■□□□□ 0.88
GCFC2-202ENST00000409857 MRE11P49959 708 aa20.54■□□□□ 0.88
GCFC2-202ENST00000409857 DALRD3Q5D0E6 543 aaKnown RBP20.54■□□□□ 0.88
GCFC2-202ENST00000409857 PRPF40BQ6NWY9 871 aaKnown RBP20.54■□□□□ 0.88
GCFC2-202ENST00000409857 TBC1D9Q6ZT07 1266 aa20.54■□□□□ 0.88
GCFC2-202ENST00000409857 GRPEL1Q9HAV7 217 aa20.54■□□□□ 0.88
GCFC2-202ENST00000409857 PNMA6EA0A0J9YXQ4 647 aa20.53■□□□□ 0.88
GCFC2-202ENST00000409857 IGHMBP2P38935 993 aaKnown RBP20.53■□□□□ 0.88
GCFC2-202ENST00000409857 COPRSQ9NQ92 184 aa20.53■□□□□ 0.88
GCFC2-202ENST00000409857 BSDC1Q9NW68 430 aaPredicted RBP20.53■□□□□ 0.88
GCFC2-202ENST00000409857 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
GCFC2-202ENST00000409857 PPEF1O14829 653 aaPredicted RBP20.52■□□□□ 0.88
GCFC2-202ENST00000409857 HMMRO75330 724 aa20.52■□□□□ 0.88
GCFC2-202ENST00000409857 PTPN12Q05209 780 aaKnown RBP20.52■□□□□ 0.88
GCFC2-202ENST00000409857 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.87
GCFC2-202ENST00000409857 GCC1Q96CN9 775 aa20.52■□□□□ 0.87
GCFC2-202ENST00000409857 GAS2L3Q86XJ1 694 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 SP8Q8IXZ3 490 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 C7orf43Q8WVR3 580 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 ATP6V0A2Q9Y487 856 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 HSP90AA1P07900 732 aaKnown RBP20.51■□□□□ 0.87
GCFC2-202ENST00000409857 RAB3GAP1Q15042 981 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 CC2D2BQ6DHV5 1058 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
GCFC2-202ENST00000409857 LTBP1Q14766 1721 aa20.5■□□□□ 0.87
GCFC2-202ENST00000409857 GRIPAP1Q4V328 841 aa20.5■□□□□ 0.87
GCFC2-202ENST00000409857 SOGA3Q5TF21 947 aa20.5■□□□□ 0.87
GCFC2-202ENST00000409857 CIAO1O76071 339 aa20.5■□□□□ 0.87
GCFC2-202ENST00000409857 ZNF594Q96JF6 807 aaPredicted RBP20.5■□□□□ 0.87
GCFC2-202ENST00000409857 FER1L6Q2WGJ9 1857 aa20.49■□□□□ 0.87
GCFC2-202ENST00000409857 LDHAL6AQ6ZMR3 332 aa20.49■□□□□ 0.87
GCFC2-202ENST00000409857 SNED1Q8TER0 1413 aa20.48■□□□□ 0.87
GCFC2-202ENST00000409857 EYA2O00167 538 aa20.48■□□□□ 0.87
GCFC2-202ENST00000409857 TMX4Q9H1E5 349 aaPredicted RBP20.48■□□□□ 0.87
GCFC2-202ENST00000409857 CIZ1Q9ULV3 898 aaPredicted RBP20.48■□□□□ 0.87
GCFC2-202ENST00000409857 BCS1LQ9Y276 419 aa20.48■□□□□ 0.87
GCFC2-202ENST00000409857 CLCN1P35523 988 aa20.47■□□□□ 0.87
GCFC2-202ENST00000409857 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
GCFC2-202ENST00000409857 GBP4Q96PP9 640 aa20.47■□□□□ 0.87
GCFC2-202ENST00000409857 RIPOR2Q9Y4F9 1068 aa20.47■□□□□ 0.87
GCFC2-202ENST00000409857 K7ELQ4 463 aaPredicted RBP20.47■□□□□ 0.87
GCFC2-202ENST00000409857 CNNM1Q9NRU3 951 aa20.47■□□□□ 0.87
GCFC2-202ENST00000409857 MROH5Q6ZUA9 1318 aa20.46■□□□□ 0.87
GCFC2-202ENST00000409857 MINPP1Q9UNW1 487 aa20.46■□□□□ 0.87
GCFC2-202ENST00000409857 NAP1L5Q96NT1 182 aaPredicted RBP20.46■□□□□ 0.87
GCFC2-202ENST00000409857 PA2G4Q9UQ80 394 aaKnown RBP20.46■□□□□ 0.87
GCFC2-202ENST00000409857 C21orf2O43822 256 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 GSPT1P15170 499 aaKnown RBP20.45■□□□□ 0.86
GCFC2-202ENST00000409857 IL15P40933 162 aaPredicted RBP20.45■□□□□ 0.86
GCFC2-202ENST00000409857 CCDC93Q567U6 631 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 ANKRD2Q9GZV1 360 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 SRCAPQ6ZRS2 3230 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 ATG9AQ7Z3C6 839 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 RTKN2Q8IZC4 609 aa20.45■□□□□ 0.86
GCFC2-202ENST00000409857 PUS3Q9BZE2 481 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms