RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 GRIPAP1Q4V328 841 aa20.64■□□□□ 0.89
SUMO1-208ENST00000409627 CCDC93Q567U6 631 aa20.64■□□□□ 0.89
SUMO1-208ENST00000409627 PUS3Q9BZE2 481 aaKnown RBP20.64■□□□□ 0.89
SUMO1-208ENST00000409627 MINPP1Q9UNW1 487 aa20.64■□□□□ 0.89
SUMO1-208ENST00000409627 NOP58Q9Y2X3 529 aaKnown RBP20.64■□□□□ 0.89
SUMO1-208ENST00000409627 RIPOR2Q9Y4F9 1068 aa20.64■□□□□ 0.89
SUMO1-208ENST00000409627 LRRC24Q50LG9 513 aa20.63■□□□□ 0.89
SUMO1-208ENST00000409627 SLC51AQ86UW1 340 aa20.63■□□□□ 0.89
SUMO1-208ENST00000409627 SIL1Q9H173 461 aa20.63■□□□□ 0.89
SUMO1-208ENST00000409627 ZNF219Q9P2Y4 722 aaPredicted RBP20.63■□□□□ 0.89
SUMO1-208ENST00000409627 DUOX1Q9NRD9 1551 aa20.63■□□□□ 0.89
SUMO1-208ENST00000409627 MROH5Q6ZUA9 1318 aa20.62■□□□□ 0.89
SUMO1-208ENST00000409627 YBX3P16989 372 aaKnown RBP eCLIP20.62■□□□□ 0.89
SUMO1-208ENST00000409627 IL15P40933 162 aaPredicted RBP20.62■□□□□ 0.89
SUMO1-208ENST00000409627 CHRNDQ07001 517 aa20.62■□□□□ 0.89
SUMO1-208ENST00000409627 HDAC1Q13547 482 aaPredicted RBP20.62■□□□□ 0.89
SUMO1-208ENST00000409627 OLFM4Q6UX06 510 aa20.62■□□□□ 0.89
SUMO1-208ENST00000409627 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
SUMO1-208ENST00000409627 ANKRD2Q9GZV1 360 aa20.62■□□□□ 0.89
SUMO1-208ENST00000409627 SURF6O75683 361 aaKnown RBP20.61■□□□□ 0.89
SUMO1-208ENST00000409627 ERICH6BQ5W0A0 696 aa20.61■□□□□ 0.89
SUMO1-208ENST00000409627 RTKN2Q8IZC4 609 aa20.61■□□□□ 0.89
SUMO1-208ENST00000409627 PODXL2Q9NZ53 605 aa20.61■□□□□ 0.89
SUMO1-208ENST00000409627 XDHP47989 1333 aa20.6■□□□□ 0.89
SUMO1-208ENST00000409627 GPSM2P81274 684 aa20.6■□□□□ 0.89
SUMO1-208ENST00000409627 G3BP1Q13283 466 aaKnown RBP eCLIP20.6■□□□□ 0.89
SUMO1-208ENST00000409627 HSP90AB4PQ58FF6 505 aa20.6■□□□□ 0.89
SUMO1-208ENST00000409627 PELP1Q8IZL8 1130 aaKnown RBP20.6■□□□□ 0.89
SUMO1-208ENST00000409627 MPNDQ8N594 471 aa20.6■□□□□ 0.89
SUMO1-208ENST00000409627 SRCAPQ6ZRS2 3230 aa20.6■□□□□ 0.89
SUMO1-208ENST00000409627 GPR162Q16538 588 aa20.59■□□□□ 0.89
SUMO1-208ENST00000409627 METTL24Q5JXM2 366 aa20.59■□□□□ 0.89
SUMO1-208ENST00000409627 ANKIB1Q9P2G1 1089 aa20.59■□□□□ 0.89
SUMO1-208ENST00000409627 NSFL1CQ9UNZ2 370 aaKnown RBP20.59■□□□□ 0.89
SUMO1-208ENST00000409627 EXOC6BQ9Y2D4 811 aa20.59■□□□□ 0.89
SUMO1-208ENST00000409627 DPP8Q6V1X1 898 aaPredicted RBP20.58■□□□□ 0.89
SUMO1-208ENST00000409627 VGLL2Q8N8G2 317 aa20.58■□□□□ 0.89
SUMO1-208ENST00000409627 PSMD1Q99460 953 aa20.58■□□□□ 0.89
SUMO1-208ENST00000409627 RTFDC1Q9BY42 306 aaPredicted RBP20.58■□□□□ 0.89
SUMO1-208ENST00000409627 RWDD1Q9H446 243 aaPredicted RBP20.58■□□□□ 0.89
SUMO1-208ENST00000409627 DCTPP1Q9H773 170 aa20.58■□□□□ 0.89
SUMO1-208ENST00000409627 ARAP2Q8WZ64 1704 aa20.58■□□□□ 0.88
SUMO1-208ENST00000409627 LTBP3Q9NS15 1303 aa20.57■□□□□ 0.88
SUMO1-208ENST00000409627 PDE8BO95263 885 aa20.57■□□□□ 0.88
SUMO1-208ENST00000409627 FKBP4Q02790 459 aaKnown RBP eCLIP20.57■□□□□ 0.88
SUMO1-208ENST00000409627 OS9Q13438 667 aaPredicted RBP20.57■□□□□ 0.88
SUMO1-208ENST00000409627 ERC1Q8IUD2 1116 aa20.57■□□□□ 0.88
SUMO1-208ENST00000409627 CEP126Q9P2H0 1117 aa20.57■□□□□ 0.88
SUMO1-208ENST00000409627 LEMD3Q9Y2U8 911 aa20.57■□□□□ 0.88
SUMO1-208ENST00000409627 GRIN3BO60391 1043 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 RAB11FIP3O75154 756 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 TAF5LO75529 589 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 SASH1O94885 1247 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 ATP2B4P23634 1241 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 SUPT20HQ8NEM7 779 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 HELBQ8NG08 1087 aaPredicted RBP20.56■□□□□ 0.88
SUMO1-208ENST00000409627 GGA1Q9UJY5 639 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 SBF1O95248 1867 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 CCDC88AQ3V6T2 1871 aa20.56■□□□□ 0.88
SUMO1-208ENST00000409627 NFKBIEO00221 500 aa20.55■□□□□ 0.88
SUMO1-208ENST00000409627 UFL1O94874 794 aa20.55■□□□□ 0.88
SUMO1-208ENST00000409627 TBC1D16Q8TBP0 767 aa20.55■□□□□ 0.88
SUMO1-208ENST00000409627 TAOK3Q9H2K8 898 aa20.55■□□□□ 0.88
SUMO1-208ENST00000409627 ZNF804BA4D1E1 1349 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 TFCP2Q12800 502 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 UBE4AQ14139 1066 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 ARHGAP27Q6ZUM4 889 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 GCC1Q96CN9 775 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 POLLQ9UGP5 575 aa20.54■□□□□ 0.88
SUMO1-208ENST00000409627 DICER1Q9UPY3 1922 aaKnown RBP20.54■□□□□ 0.88
SUMO1-208ENST00000409627 IGHDP01880 384 aa20.53■□□□□ 0.88
SUMO1-208ENST00000409627 KCNJ4P48050 445 aa20.53■□□□□ 0.88
SUMO1-208ENST00000409627 PUM3Q15397 648 aaKnown RBP20.53■□□□□ 0.88
SUMO1-208ENST00000409627 KIF1BPQ96EK5 621 aa20.53■□□□□ 0.88
SUMO1-208ENST00000409627 GPR108Q9NPR9 543 aa20.53■□□□□ 0.88
SUMO1-208ENST00000409627 ZNF609O15014 1411 aa20.53■□□□□ 0.88
SUMO1-208ENST00000409627 MED23Q9ULK4 1368 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 C6orf229H3BNL8 230 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 FGFR2P21802 821 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 RHPN1Q8TCX5 695 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 EYA3Q99504 573 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 VPS33BQ9H267 617 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 AKAP2Q9Y2D5 859 aa20.52■□□□□ 0.88
SUMO1-208ENST00000409627 DCAF8L1A6NGE4 600 aa20.51■□□□□ 0.87
SUMO1-208ENST00000409627 RASSF7Q02833 373 aa20.51■□□□□ 0.87
SUMO1-208ENST00000409627 ATP2B3Q16720 1220 aa20.51■□□□□ 0.87
SUMO1-208ENST00000409627 C15orf52Q6ZUT6 534 aaKnown RBP20.51■□□□□ 0.87
SUMO1-208ENST00000409627 SMC5Q8IY18 1101 aa20.51■□□□□ 0.87
SUMO1-208ENST00000409627 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.51■□□□□ 0.87
SUMO1-208ENST00000409627 IRS2Q9Y4H2 1338 aa20.51■□□□□ 0.87
SUMO1-208ENST00000409627 WTIPA6NIX2 430 aaPredicted RBP20.5■□□□□ 0.87
SUMO1-208ENST00000409627 SNAP23O00161 211 aa20.5■□□□□ 0.87
SUMO1-208ENST00000409627 LPIN2Q92539 896 aa20.5■□□□□ 0.87
SUMO1-208ENST00000409627 LRRCC1Q9C099 1032 aa20.5■□□□□ 0.87
SUMO1-208ENST00000409627 APBB1O00213 710 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 SLC5A1P13866 664 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 KIAA2012Q0VF49 1180 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 WASHC4Q2M389 1173 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 TNNI3KQ59H18 835 aa20.49■□□□□ 0.87
SUMO1-208ENST00000409627 ZNF277Q9NRM2 450 aaPredicted RBP20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms