RNA–Protein interactions for RNA: ENST00000409254.1

LIMS2-203, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMS2, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-203ENST00000409254 KIF1BPQ96EK5 621 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 CCDC136Q96JN2 1154 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 ANKRD2Q9GZV1 360 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 SEC31BQ9NQW1 1179 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
LIMS2-203ENST00000409254 PPEF1O14829 653 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-203ENST00000409254 SURF6O75683 361 aaKnown RBP16.11■□□□□ 0.17
LIMS2-203ENST00000409254 PRPF40BQ6NWY9 871 aaKnown RBP16.11■□□□□ 0.17
LIMS2-203ENST00000409254 ATG9AQ7Z3C6 839 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 SP8Q8IXZ3 490 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
LIMS2-203ENST00000409254 TMX4Q9H1E5 349 aaPredicted RBP16.11■□□□□ 0.17
LIMS2-203ENST00000409254 CNNM1Q9NRU3 951 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 ATP6V0A2Q9Y487 856 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 SBF1O95248 1867 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 CCDC88AQ3V6T2 1871 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 ZNF609O15014 1411 aa16.11■□□□□ 0.17
LIMS2-203ENST00000409254 DUOX1Q9NRD9 1551 aa16.1■□□□□ 0.17
LIMS2-203ENST00000409254 ZBTB22O15209 634 aa16.1■□□□□ 0.17
LIMS2-203ENST00000409254 DPEP1P16444 411 aa16.1■□□□□ 0.17
LIMS2-203ENST00000409254 FHDC1Q9C0D6 1143 aaPredicted RBP16.1■□□□□ 0.17
LIMS2-203ENST00000409254 XDHP47989 1333 aa16.1■□□□□ 0.17
LIMS2-203ENST00000409254 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 CHRNA5P30532 468 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 VGLL2Q8N8G2 317 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 C7orf43Q8WVR3 580 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIMS2-203ENST00000409254 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
LIMS2-203ENST00000409254 LRRCC1Q9C099 1032 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 AKAP2Q9Y2D5 859 aa16.09■□□□□ 0.17
LIMS2-203ENST00000409254 OS9Q13438 667 aaPredicted RBP16.08■□□□□ 0.16
LIMS2-203ENST00000409254 DALRD3Q5D0E6 543 aaKnown RBP16.08■□□□□ 0.16
LIMS2-203ENST00000409254 SYT17Q9BSW7 474 aa16.08■□□□□ 0.16
LIMS2-203ENST00000409254 CEP126Q9P2H0 1117 aa16.08■□□□□ 0.16
LIMS2-203ENST00000409254 MINPP1Q9UNW1 487 aa16.08■□□□□ 0.16
LIMS2-203ENST00000409254 PA2G4Q9UQ80 394 aaKnown RBP16.08■□□□□ 0.16
LIMS2-203ENST00000409254 AKAP11Q9UKA4 1901 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 A0A0G2JLW4 131 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 PDE8BO95263 885 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 IGHDP01880 384 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 UBE4AQ14139 1066 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 PUM3Q15397 648 aaKnown RBP16.07■□□□□ 0.16
LIMS2-203ENST00000409254 METTL24Q5JXM2 366 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 C15orf52Q6ZUT6 534 aaKnown RBP16.07■□□□□ 0.16
LIMS2-203ENST00000409254 RTKN2Q8IZC4 609 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 ZNF594Q96JF6 807 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-203ENST00000409254 VPS33BQ9H267 617 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
LIMS2-203ENST00000409254 EXOC6BQ9Y2D4 811 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 LEMD3Q9Y2U8 911 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
LIMS2-203ENST00000409254 MYH7P12883 1935 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 SASH1O94885 1247 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 CHRNDQ07001 517 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 LRRC24Q50LG9 513 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 CCDC93Q567U6 631 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 CLASRPQ8N2M8 674 aaKnown RBP16.06■□□□□ 0.16
LIMS2-203ENST00000409254 KLHDC4Q8TBB5 520 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 PSMD1Q99460 953 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 RTFDC1Q9BY42 306 aaPredicted RBP16.06■□□□□ 0.16
LIMS2-203ENST00000409254 SIL1Q9H173 461 aa16.06■□□□□ 0.16
LIMS2-203ENST00000409254 MED23Q9ULK4 1368 aa16.05■□□□□ 0.16
LIMS2-203ENST00000409254 ATP2B4P23634 1241 aa16.05■□□□□ 0.16
LIMS2-203ENST00000409254 NUCB1Q02818 461 aa16.05■□□□□ 0.16
LIMS2-203ENST00000409254 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
LIMS2-203ENST00000409254 PUS3Q9BZE2 481 aaKnown RBP16.05■□□□□ 0.16
LIMS2-203ENST00000409254 FGFR2P21802 821 aa16.04■□□□□ 0.16
LIMS2-203ENST00000409254 NLGN2Q8NFZ4 835 aa16.04■□□□□ 0.16
LIMS2-203ENST00000409254 LPIN2Q92539 896 aa16.04■□□□□ 0.16
LIMS2-203ENST00000409254 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
LIMS2-203ENST00000409254 KLHL34Q8N239 644 aa16.03■□□□□ 0.16
LIMS2-203ENST00000409254 GGA1Q9UJY5 639 aa16.03■□□□□ 0.16
LIMS2-203ENST00000409254 GTF3C3Q9Y5Q9 886 aa16.03■□□□□ 0.16
LIMS2-203ENST00000409254 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
LIMS2-203ENST00000409254 AOX1Q06278 1338 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 IFIT1P09914 478 aaKnown RBP16.02■□□□□ 0.16
LIMS2-203ENST00000409254 SLC5A1P13866 664 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 TFCP2Q12800 502 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 ATP2B3Q16720 1220 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 TNNI3KQ59H18 835 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 DPP8Q6V1X1 898 aaPredicted RBP16.02■□□□□ 0.16
LIMS2-203ENST00000409254 CHD1LQ86WJ1 897 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 MPNDQ8N594 471 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 EYA3Q99504 573 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 ANKIB1Q9P2G1 1089 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.16
LIMS2-203ENST00000409254 ZNF804BA4D1E1 1349 aa16.01■□□□□ 0.15
LIMS2-203ENST00000409254 GPATCH3Q96I76 525 aa16.01■□□□□ 0.15
LIMS2-203ENST00000409254 TIAM2Q8IVF5 1701 aa16.01■□□□□ 0.15
LIMS2-203ENST00000409254 IRS2Q9Y4H2 1338 aa16■□□□□ 0.15
LIMS2-203ENST00000409254 A0A1B0GUL7 405 aa16■□□□□ 0.15
LIMS2-203ENST00000409254 KCNJ4P48050 445 aa16■□□□□ 0.15
LIMS2-203ENST00000409254 FKBP4Q02790 459 aaKnown RBP eCLIP16■□□□□ 0.15
LIMS2-203ENST00000409254 B4GALNT3Q6L9W6 998 aa16■□□□□ 0.15
LIMS2-203ENST00000409254 ZNF512BQ96KM6 892 aaPredicted RBP16■□□□□ 0.15
LIMS2-203ENST00000409254 PDS5AQ29RF7 1337 aaKnown RBP15.99■□□□□ 0.15
LIMS2-203ENST00000409254 TTC41PQ6P2S7 1318 aa15.99■□□□□ 0.15
LIMS2-203ENST00000409254 SALL3Q9BXA9 1300 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms