RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF609O15014 1411 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 C6orf229H3BNL8 230 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 TBC1D8O95759 1140 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 GPSM2P81274 684 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 TCIRG1Q13488 830 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 NFE2L2Q16236 605 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 ANGEL2Q5VTE6 544 aaKnown RBP16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 PLEKHF1Q96S99 279 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
CHRNA1-203ENST00000409219 NEFMP07197 916 aa16.94■□□□□ 0.3
CHRNA1-203ENST00000409219 VIL1P09327 827 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-203ENST00000409219 FKBP1BP68106 108 aa16.94■□□□□ 0.3
CHRNA1-203ENST00000409219 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
CHRNA1-203ENST00000409219 XAGE3Q8WTP9 111 aa16.94■□□□□ 0.3
CHRNA1-203ENST00000409219 FBXO46Q6PJ61 603 aaPredicted RBP16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 MOB2Q70IA6 237 aa16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 EYA3Q99504 573 aa16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 ZNF280AP59817 542 aaPredicted RBP16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 SCARF1Q14162 830 aa16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 SF3B3Q15393 1217 aaKnown RBP16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 HABP4Q5JVS0 413 aaKnown RBP16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 TBC1D16Q8TBP0 767 aa16.93■□□□□ 0.3
CHRNA1-203ENST00000409219 GPR25O00155 361 aa16.92■□□□□ 0.3
CHRNA1-203ENST00000409219 NECTIN2Q92692 538 aa16.92■□□□□ 0.3
CHRNA1-203ENST00000409219 NOM1Q5C9Z4 860 aaKnown RBP16.91■□□□□ 0.3
CHRNA1-203ENST00000409219 PITPNM2Q9BZ72 1349 aa16.9■□□□□ 0.3
CHRNA1-203ENST00000409219 RSBN1LQ6PCB5 846 aaPredicted RBP16.9■□□□□ 0.3
CHRNA1-203ENST00000409219 FAM89AQ96GI7 184 aa16.9■□□□□ 0.3
CHRNA1-203ENST00000409219 SCAF8Q9UPN6 1271 aaKnown RBP16.9■□□□□ 0.3
CHRNA1-203ENST00000409219 RBBP6Q7Z6E9 1792 aaKnown RBP16.9■□□□□ 0.3
CHRNA1-203ENST00000409219 UBE2Q2LH0YL09 131 aa16.89■□□□□ 0.29
CHRNA1-203ENST00000409219 TM4SF4P48230 202 aa16.89■□□□□ 0.29
CHRNA1-203ENST00000409219 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
CHRNA1-203ENST00000409219 CCER1Q8TC90 406 aaPredicted RBP16.89■□□□□ 0.29
CHRNA1-203ENST00000409219 ZNF646O15015 1829 aaPredicted RBP16.89■□□□□ 0.29
CHRNA1-203ENST00000409219 ZC3H12CQ9C0D7 883 aaKnown RBP16.88■□□□□ 0.29
CHRNA1-203ENST00000409219 MYOZ2Q9NPC6 264 aa16.88■□□□□ 0.29
CHRNA1-203ENST00000409219 PODXL2Q9NZ53 605 aa16.88■□□□□ 0.29
CHRNA1-203ENST00000409219 UFL1O94874 794 aa16.87■□□□□ 0.29
CHRNA1-203ENST00000409219 GMLQ99445 158 aa16.87■□□□□ 0.29
CHRNA1-203ENST00000409219 R3HDMLQ9H3Y0 253 aa16.87■□□□□ 0.29
CHRNA1-203ENST00000409219 MAPK8IP3Q9UPT6 1336 aa16.87■□□□□ 0.29
CHRNA1-203ENST00000409219 FKTNO75072 461 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 RTL5Q5HYW3 569 aaPredicted RBP16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 CFHR5Q9BXR6 569 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 POTEFA5A3E0 1075 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 G3V3G9 751 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 USP17L8P0C7I0 530 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 RPS8P62241 208 aaKnown RBP16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 MKRN3Q13064 507 aaKnown RBP16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 DCAF8Q5TAQ9 597 aa16.86■□□□□ 0.29
CHRNA1-203ENST00000409219 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 SREBF2Q12772 1141 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 KRT24Q2M2I5 525 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 PLBD2Q8NHP8 589 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 SEC31BQ9NQW1 1179 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 CHPF2Q9P2E5 772 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 GGA1Q9UJY5 639 aa16.85■□□□□ 0.29
CHRNA1-203ENST00000409219 KIAA0100Q14667 2235 aaKnown RBP16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 LAMB1P07942 1786 aa16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 IRS4O14654 1257 aaPredicted RBP16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 FXR1P51114 621 aaKnown RBP eCLIP16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 TTLL12Q14166 644 aaPredicted RBP16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 NBPF9Q3BBW0 867 aa16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 ANKIB1Q9P2G1 1089 aa16.84■□□□□ 0.29
CHRNA1-203ENST00000409219 ANKRD13DQ6ZTN6 518 aa16.82■□□□□ 0.28
CHRNA1-203ENST00000409219 SZT2Q5T011 3432 aa16.82■□□□□ 0.28
CHRNA1-203ENST00000409219 RIPK4P57078 832 aa16.81■□□□□ 0.28
CHRNA1-203ENST00000409219 TRIM17Q9Y577 477 aa16.81■□□□□ 0.28
CHRNA1-203ENST00000409219 USP17L3A6NCW0 530 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 USP17L4A6NCW7 530 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 PTPN12Q05209 780 aaKnown RBP16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 OTOP1Q7RTM1 612 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 USP17L1Q7RTZ2 530 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 WNT10BO00744 389 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 NF2P35240 595 aa16.8■□□□□ 0.28
CHRNA1-203ENST00000409219 XDHP47989 1333 aa16.79■□□□□ 0.28
CHRNA1-203ENST00000409219 TRIM28Q13263 835 aaKnown RBP16.79■□□□□ 0.28
CHRNA1-203ENST00000409219 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
CHRNA1-203ENST00000409219 INTS3Q68E01 1043 aaKnown RBP16.79■□□□□ 0.28
CHRNA1-203ENST00000409219 PODNQ7Z5L7 613 aa16.79■□□□□ 0.28
CHRNA1-203ENST00000409219 SPEF2Q9C093 1822 aa16.78■□□□□ 0.28
CHRNA1-203ENST00000409219 PRKG1Q13976 671 aa16.78■□□□□ 0.28
CHRNA1-203ENST00000409219 SPRYD7Q5W111 196 aa16.78■□□□□ 0.28
CHRNA1-203ENST00000409219 MXD3Q9BW11 206 aa16.78■□□□□ 0.28
CHRNA1-203ENST00000409219 ALDH1A1P00352 501 aa16.77■□□□□ 0.28
CHRNA1-203ENST00000409219 LDLRAD1Q5T700 205 aa16.77■□□□□ 0.28
CHRNA1-203ENST00000409219 ARMC9Q7Z3E5 817 aa16.77■□□□□ 0.28
CHRNA1-203ENST00000409219 ZBTB38Q8NAP3 1195 aaPredicted RBP16.77■□□□□ 0.28
CHRNA1-203ENST00000409219 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
CHRNA1-203ENST00000409219 WTIPA6NIX2 430 aaPredicted RBP16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 CHL1O00533 1208 aa16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 SASH1O94885 1247 aa16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 TMPOP42166 694 aaKnown RBP16.76■□□□□ 0.27
CHRNA1-203ENST00000409219 CCDC152Q4G0S7 254 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms