RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 HPS5Q9UPZ3 1129 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
NIF3L1-203ENST00000409129 KIAA2012Q0VF49 1180 aa11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 TMC4Q7Z404 712 aa11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 IFNLR1Q8IU57 520 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 RNF186Q9NXI6 227 aa11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 SZT2Q5T011 3432 aa11.93□□□□□ -0.5
NIF3L1-203ENST00000409129 CENPFP49454 3210 aa11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 GMPSP49915 693 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 KIF23Q02241 960 aaPredicted RBP11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 CTU1Q7Z7A3 348 aaKnown RBP11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 ZNF428Q96B54 188 aa11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 ISCA1Q9BUE6 129 aa11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 HYPKQ9NX55 129 aa11.92□□□□□ -0.5
NIF3L1-203ENST00000409129 ATP5J2-PTCD1G3V325 749 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 RAD17O75943 681 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 TNIP1Q15025 636 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 SF3B3Q15393 1217 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 DUSP27Q5VZP5 1158 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 USP48Q86UV5 1035 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 FAM89AQ96GI7 184 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 SAGE1Q9NXZ1 904 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 ANKRD36CQ5JPF3 1778 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 KIAA0100Q14667 2235 aaKnown RBP11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 HTTP42858 3142 aa11.91□□□□□ -0.5
NIF3L1-203ENST00000409129 TRIM28Q13263 835 aaKnown RBP11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 RGMBQ6NW40 437 aa11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 BCL2L13Q9BXK5 485 aa11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 MBIPQ9NS73 344 aa11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 PGAP2Q9UHJ9 254 aa11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 BRCA2P51587 3418 aa11.9□□□□□ -0.5
NIF3L1-203ENST00000409129 RBBP6Q7Z6E9 1792 aaKnown RBP11.9□□□□□ -0.51
NIF3L1-203ENST00000409129 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 TRIOBPQ9H2D6 2365 aa11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 FXR1P51114 621 aaKnown RBP eCLIP11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 REM2Q8IYK8 340 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 CELF1Q92879 486 aaKnown RBP11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 PRKRIP1Q9H875 184 aaPredicted RBP11.89□□□□□ -0.51
NIF3L1-203ENST00000409129 CEP290O15078 2479 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 YDJCA8MPS7 323 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 IRS4O14654 1257 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 WASHC4Q2M389 1173 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 RTL5Q5HYW3 569 aaPredicted RBP11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 CDC37L1Q7L3B6 337 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 RIC3Q7Z5B4 369 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 GCC1Q96CN9 775 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 CSRNP1Q96S65 589 aa11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 CNOT7Q9UIV1 285 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 NSFL1CQ9UNZ2 370 aaKnown RBP11.88□□□□□ -0.51
NIF3L1-203ENST00000409129 SCN9AQ15858 1988 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 ADM5C9JUS6 153 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 H7C1D1 291 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 HAX1O00165 279 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 APAF1O14727 1248 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 EGFRP00533 1210 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 ZNF157P51786 506 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 GNAI1P63096 354 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 DPF2Q92785 391 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 IFT57Q9NWB7 429 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 POLLQ9UGP5 575 aa11.87□□□□□ -0.51
NIF3L1-203ENST00000409129 ELL2O00472 640 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 RIMBP2O15034 1052 aa11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 RPS8P62241 208 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 GPSM2P81274 684 aa11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 DBNDD1Q9H9R9 158 aa11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 GBA2Q9HCG7 927 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 DUOX1Q9NRD9 1551 aa11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-203ENST00000409129 PSMD14O00487 310 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 SLC10A3P09131 477 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 HSP90B1P14625 803 aaKnown RBP11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 SAMD7Q7Z3H4 446 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 MICALL2Q8IY33 904 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 C8orf58Q8NAV2 365 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 EYA3Q99504 573 aa11.85□□□□□ -0.51
NIF3L1-203ENST00000409129 LRRC37AA6NMS7 1700 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 ECE2O60344 883 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 DOK7Q18PE1 504 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 CCDC191Q8NCU4 936 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 TBC1D16Q8TBP0 767 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 ZNF296Q8WUU4 475 aaPredicted RBP11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 MYD88Q99836 296 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 CHMP4AQ9BY43 222 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 ZC3H12CQ9C0D7 883 aaKnown RBP11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 SEC31BQ9NQW1 1179 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 KCNQ5Q9NR82 932 aa11.84□□□□□ -0.51
NIF3L1-203ENST00000409129 TBC1D8O95759 1140 aa11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 PCCAP05165 728 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 RPS12P25398 132 aaKnown RBP11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 TBC1D10BQ4KMP7 808 aaPredicted RBP11.83□□□□□ -0.52
NIF3L1-203ENST00000409129 KRT26Q7Z3Y9 468 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms