RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 SAGE1Q9NXZ1 904 aa17.12■□□□□ 0.33
TUBA3D-202ENST00000409047 ZNF609O15014 1411 aa17.12■□□□□ 0.33
TUBA3D-202ENST00000409047 SLC10A3P09131 477 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 HOXB7P09629 217 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 KIF4BQ2VIQ3 1234 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 RBM26Q5T8P6 1007 aaKnown RBP17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 CCDC146Q8IYE0 955 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 RNF186Q9NXI6 227 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 PODXL2Q9NZ53 605 aa17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
TUBA3D-202ENST00000409047 IRS4O14654 1257 aaPredicted RBP17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 RPS8P62241 208 aaKnown RBP17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 NEUROD2Q15784 382 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 C2orf69Q8N8R5 385 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 CCDC102AQ96A19 550 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 CFAP44Q96MT7 982 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 CSRNP1Q96S65 589 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 SEC31BQ9NQW1 1179 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 GGA3Q9NZ52 723 aa17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
TUBA3D-202ENST00000409047 ZNF157P51786 506 aaPredicted RBP17.09■□□□□ 0.33
TUBA3D-202ENST00000409047 ZNF280AP59817 542 aaPredicted RBP17.09■□□□□ 0.33
TUBA3D-202ENST00000409047 DCPSQ96C86 337 aaKnown RBP17.09■□□□□ 0.33
TUBA3D-202ENST00000409047 TRPA1O75762 1119 aa17.08■□□□□ 0.32
TUBA3D-202ENST00000409047 RALBP1Q15311 655 aa17.08■□□□□ 0.32
TUBA3D-202ENST00000409047 CDCA5Q96FF9 252 aa17.08■□□□□ 0.32
TUBA3D-202ENST00000409047 GMLQ99445 158 aa17.08■□□□□ 0.32
TUBA3D-202ENST00000409047 EYA3Q99504 573 aa17.08■□□□□ 0.32
TUBA3D-202ENST00000409047 DUSP27Q5VZP5 1158 aa17.07■□□□□ 0.32
TUBA3D-202ENST00000409047 LAS1LQ9Y4W2 734 aaKnown RBP17.07■□□□□ 0.32
TUBA3D-202ENST00000409047 PAPPA2Q9BXP8 1791 aa17.07■□□□□ 0.32
TUBA3D-202ENST00000409047 RASAL3Q86YV0 1011 aa17.06■□□□□ 0.32
TUBA3D-202ENST00000409047 ZBTB38Q8NAP3 1195 aaPredicted RBP17.06■□□□□ 0.32
TUBA3D-202ENST00000409047 HYPKQ9NX55 129 aa17.06■□□□□ 0.32
TUBA3D-202ENST00000409047 HTTP42858 3142 aa17.06■□□□□ 0.32
TUBA3D-202ENST00000409047 MKI67P46013 3256 aaKnown RBP17.06■□□□□ 0.32
TUBA3D-202ENST00000409047 WTIPA6NIX2 430 aaPredicted RBP17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 UFL1O94874 794 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 ZNF853P0CG23 659 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 SOX10P56693 466 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 SCARF1Q14162 830 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 ANGEL2Q5VTE6 544 aaKnown RBP17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 RSBN1LQ6PCB5 846 aaPredicted RBP17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 SULF1Q8IWU6 871 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 ZC3H12CQ9C0D7 883 aaKnown RBP17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 MBIPQ9NS73 344 aa17.05■□□□□ 0.32
TUBA3D-202ENST00000409047 AGBL3Q8NEM8 1001 aa17.04■□□□□ 0.32
TUBA3D-202ENST00000409047 MOB2Q70IA6 237 aa17.03■□□□□ 0.32
TUBA3D-202ENST00000409047 GGA1Q9UJY5 639 aa17.03■□□□□ 0.32
TUBA3D-202ENST00000409047 ADAMTS8Q9UP79 889 aa17.03■□□□□ 0.32
TUBA3D-202ENST00000409047 SCAF8Q9UPN6 1271 aaKnown RBP17.03■□□□□ 0.32
TUBA3D-202ENST00000409047 PCCAP05165 728 aaPredicted RBP17.02■□□□□ 0.32
TUBA3D-202ENST00000409047 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
TUBA3D-202ENST00000409047 ANKIB1Q9P2G1 1089 aa17.02■□□□□ 0.32
TUBA3D-202ENST00000409047 MYBBP1AQ9BQG0 1328 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 PITPNM2Q9BZ72 1349 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 CENPFP49454 3210 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 SPEF2Q9C093 1822 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 RIC3Q7Z5B4 369 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 CTU1Q7Z7A3 348 aaKnown RBP17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 MYD88Q99836 296 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 MYOZ2Q9NPC6 264 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 PCDH10Q9P2E7 1040 aa17.01■□□□□ 0.31
TUBA3D-202ENST00000409047 MYH3P11055 1940 aa17■□□□□ 0.31
TUBA3D-202ENST00000409047 PDE8AO60658 829 aa17■□□□□ 0.31
TUBA3D-202ENST00000409047 FKBP1BP68106 108 aa17■□□□□ 0.31
TUBA3D-202ENST00000409047 CCDC191Q8NCU4 936 aa17■□□□□ 0.31
TUBA3D-202ENST00000409047 CCDC85AQ96PX6 553 aaPredicted RBP17■□□□□ 0.31
TUBA3D-202ENST00000409047 USP17L8P0C7I0 530 aa16.99■□□□□ 0.31
TUBA3D-202ENST00000409047 CCDC152Q4G0S7 254 aa16.99■□□□□ 0.31
TUBA3D-202ENST00000409047 PRAMEF18Q5VWM3 479 aa16.99■□□□□ 0.31
TUBA3D-202ENST00000409047 XDHP47989 1333 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 USP17L3A6NCW0 530 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 USP17L4A6NCW7 530 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 GOLGA2Q08379 1002 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 NBPF9Q3BBW0 867 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 USP17L1Q7RTZ2 530 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 PODNQ7Z5L7 613 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 REM2Q8IYK8 340 aaPredicted RBP16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 MXD3Q9BW11 206 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 HPS5Q9UPZ3 1129 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 BRCA2P51587 3418 aa16.98■□□□□ 0.31
TUBA3D-202ENST00000409047 UBE2Q2LH0YL09 131 aa16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 DACT2Q5SW24 774 aa16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 C8orf58Q8NAV2 365 aa16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 METTL22Q9BUU2 404 aaPredicted RBP16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 CWC25Q9NXE8 425 aaPredicted RBP16.97■□□□□ 0.31
TUBA3D-202ENST00000409047 G3V3G9 751 aa16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 ELL2O00472 640 aaPredicted RBP16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 IGKV5-2P06315 115 aa16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 ANKRD18AQ8IVF6 992 aa16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 ZNF296Q8WUU4 475 aaPredicted RBP16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 IFT57Q9NWB7 429 aa16.96■□□□□ 0.31
TUBA3D-202ENST00000409047 MED23Q9ULK4 1368 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms