RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 C6orf229H3BNL8 230 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 UFL1O94874 794 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 RLBP1P12271 317 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 INTS3Q68E01 1043 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 ITPRIPQ8IWB1 547 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 LARGE2Q8N3Y3 721 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 MPHOSPH8Q99549 860 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 GPBP1L1Q9HC44 474 aaPredicted RBP12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 ANKIB1Q9P2G1 1089 aa12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
TSPAN9-202ENST00000407263 XDHP47989 1333 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 CCDC57Q2TAC2 916 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 GRIPAP1Q4V328 841 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 DZIP1LQ8IYY4 767 aaKnown RBP12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 SUPT20HQ8NEM7 779 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
TSPAN9-202ENST00000407263 PLIN1O60240 522 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 RABL6Q3YEC7 729 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 NIM1KQ8IY84 436 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 KLHDC4Q8TBB5 520 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 TBC1D16Q8TBP0 767 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 JDP2Q8WYK2 163 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 RTFDC1Q9BY42 306 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 NMRK2Q9NPI5 230 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 POLLQ9UGP5 575 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 GGA1Q9UJY5 639 aa12.9□□□□□ -0.34
TSPAN9-202ENST00000407263 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
TSPAN9-202ENST00000407263 C1orf115Q9H7X2 142 aa12.89□□□□□ -0.35
TSPAN9-202ENST00000407263 DBNDD1Q9H9R9 158 aa12.89□□□□□ -0.35
TSPAN9-202ENST00000407263 CNNM1Q9NRU3 951 aa12.89□□□□□ -0.35
TSPAN9-202ENST00000407263 MINPP1Q9UNW1 487 aa12.89□□□□□ -0.35
TSPAN9-202ENST00000407263 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
TSPAN9-202ENST00000407263 CHRNDQ07001 517 aa12.88□□□□□ -0.35
TSPAN9-202ENST00000407263 KIAA2012Q0VF49 1180 aa12.88□□□□□ -0.35
TSPAN9-202ENST00000407263 ADAMTSL1Q8N6G6 1762 aa12.88□□□□□ -0.35
TSPAN9-202ENST00000407263 MED23Q9ULK4 1368 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 GLTPD2A6NH11 291 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 TAF5LO75529 589 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 DDNO94850 711 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 GNAI3P08754 354 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 KLRK1P26718 216 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 KCNJ4P48050 445 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 WASHC4Q2M389 1173 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 LDHAL6AQ6ZMR3 332 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 HELBQ8NG08 1087 aaPredicted RBP12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 EYA3Q99504 573 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 PUS3Q9BZE2 481 aaKnown RBP12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 PODXL2Q9NZ53 605 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 GJA3Q9Y6H8 435 aa12.87□□□□□ -0.35
TSPAN9-202ENST00000407263 FZD9O00144 591 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 ECE2O60344 883 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 ATP2B4P23634 1241 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 EIF6P56537 245 aaKnown RBP12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 DOK7Q18PE1 504 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 LRRC24Q50LG9 513 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 SIL1Q9H173 461 aa12.86□□□□□ -0.35
TSPAN9-202ENST00000407263 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 YDJCA8MPS7 323 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 SNAP23O00161 211 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 C20orf194Q5TEA3 1177 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 DPY19L2Q6NUT2 758 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 RRAGCQ9HB90 399 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 COG6Q9Y2V7 657 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
TSPAN9-202ENST00000407263 G3V3G9 751 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 KIF3CO14782 793 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 RAD17O75943 681 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 GNAI2P04899 355 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 RFX5P48382 616 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 DCAF8Q5TAQ9 597 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 ZC3H12CQ9C0D7 883 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 VPS33BQ9H267 617 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 ZNRF3Q9ULT6 936 aa12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 PA2G4Q9UQ80 394 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-202ENST00000407263 SRGAP3O43295 1099 aa12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 MS4A1P11836 297 aa12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 PTPN12Q05209 780 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 METTL24Q5JXM2 366 aa12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
TSPAN9-202ENST00000407263 RRP1P56182 461 aaKnown RBP12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 CXCL9Q07325 125 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 CIAPIN1Q6FI81 312 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 C16orf71Q8IYS4 520 aaPredicted RBP12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 GPC2Q8N158 579 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 LEMD3Q9Y2U8 911 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 MROH5Q6ZUA9 1318 aa12.82□□□□□ -0.36
TSPAN9-202ENST00000407263 PNMA6EA0A0J9YXQ4 647 aa12.81□□□□□ -0.36
TSPAN9-202ENST00000407263 EYA2O00167 538 aa12.81□□□□□ -0.36
TSPAN9-202ENST00000407263 ZBTB7BO15156 539 aaPredicted RBP12.81□□□□□ -0.36
TSPAN9-202ENST00000407263 KCNQ5Q9NR82 932 aa12.81□□□□□ -0.36
TSPAN9-202ENST00000407263 RIPOR2Q9Y4F9 1068 aa12.81□□□□□ -0.36
TSPAN9-202ENST00000407263 POLR2AP24928 1970 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms