RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 ALG1LQ6GMV1 187 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 FCHSD1Q86WN1 690 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 GALNT12Q8IXK2 581 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 PARP2Q9UGN5 583 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 GGA1Q9UJY5 639 aa8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 NSFL1CQ9UNZ2 370 aaKnown RBP8.4□□□□□ -1.06
HMGB3P19-201ENST00000403971 TRPA1O75762 1119 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 ADH6P28332 368 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 SOX18P35713 384 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 GMPRP36959 345 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 NRLP54845 237 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 NCAPG2Q86XI2 1143 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 TRPM4Q8TD43 1214 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 PMEPA1Q969W9 287 aa8.39□□□□□ -1.07
HMGB3P19-201ENST00000403971 KIF4AO95239 1232 aa8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 ADAMTS2O95450 1211 aa8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 GPLD1P80108 840 aa8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 SRSF11Q05519 484 aaKnown RBP8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 HYAL2Q12891 473 aa8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 PEAR1Q5VY43 1037 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 ACDQ96AP0 544 aa8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 AVENQ9NQS1 362 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 KIAA1522Q9P206 1035 aaPredicted RBP8.38□□□□□ -1.07
HMGB3P19-201ENST00000403971 CCDC180Q9P1Z9 1646 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 LOC102724428A0A0B4J2F2 783 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 WFS1O76024 890 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 ADH7P40394 386 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 SIK1P57059 783 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 XPCQ01831 940 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 FBF1Q8TES7 1133 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 TNFRSF25Q93038 417 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 MRRFQ96E11 262 aaKnown RBP8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 OXCT2Q9BYC2 517 aaPredicted RBP8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 SLC6A14Q9UN76 642 aa8.37□□□□□ -1.07
HMGB3P19-201ENST00000403971 A0A1W2PP55 124 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 GADD45BO75293 160 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 CPB1P15086 417 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 C1orf229Q6ZS94 237 aaPredicted RBP8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 FAM35AQ86V20 835 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 CEP120Q8N960 986 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 HHIPQ96QV1 700 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 MDFIQ99750 246 aa8.36□□□□□ -1.07
HMGB3P19-201ENST00000403971 EDN3P14138 238 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 EIF2AK2P19525 551 aaKnown RBP8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 GNA15P30679 374 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 DAB2P98082 770 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 ATP11AP98196 1134 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 PSMD2Q13200 908 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 ZKSCAN3Q9BRR0 538 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 OSBPL7Q9BZF2 842 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 NLRP2Q9NX02 1062 aa8.35□□□□□ -1.07
HMGB3P19-201ENST00000403971 ADARB2-AS1A8MUL3 147 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 GRM2Q14416 872 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 GOLGA6L1Q8N7Z2 621 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 OSMRQ99650 979 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 RASSF4Q9H2L5 321 aa8.34□□□□□ -1.07
HMGB3P19-201ENST00000403971 ELOA3CA0A087WX78 387 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 ELOA3DA6NLF2 546 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 GHRHP01286 108 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 FGD1P98174 961 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 ELOA3BQ3SY89 546 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 KIAA0319Q5VV43 1072 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 NXPE4Q6UWF7 544 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 TREML4Q6UXN2 200 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 TMC4Q7Z404 712 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 ELOA3Q8NG57 546 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 SPACA7Q96KW9 195 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 BCO2Q9BYV7 579 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 EHD4Q9H223 541 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 DZANK1Q9NVP4 752 aa8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 GDF2Q9UK05 429 aaPredicted RBP8.33□□□□□ -1.08
HMGB3P19-201ENST00000403971 NFKBIEO00221 500 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 EPXP11678 715 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 MRPL58Q14197 206 aaKnown RBP8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 PCSK7Q16549 785 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 GLIS3Q8NEA6 775 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 WHAMMQ8TF30 809 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 SUV39H2Q9H5I1 410 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 SPG7Q9UQ90 795 aa8.32□□□□□ -1.08
HMGB3P19-201ENST00000403971 METTL12A8MUP2 240 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 SLURP2P0DP57 97 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 LCE2AQ5TA79 106 aaPredicted RBP8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 LYPD4Q6UWN0 246 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 ADAMTSL4Q6UY14 1074 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 GALNT6Q8NCL4 622 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 PLD4Q96BZ4 506 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 TCF12Q99081 682 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 LPIN3Q9BQK8 851 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 PBX4Q9BYU1 374 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 C12orf49Q9H741 205 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 LIN7BQ9HAP6 207 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 MRS2Q9HD23 443 aa8.31□□□□□ -1.08
HMGB3P19-201ENST00000403971 VTI1BQ9UEU0 232 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms