RNA–Protein interactions for RNA: ENST00000403681.6

HMGA2-204, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HMGA2, Length 4,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-204ENST00000403681 NEK11Q8NG66 645 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 CDC42BPBQ9Y5S2 1711 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 IFIT1P09914 478 aaKnown RBP16.09■□□□□ 0.17
HMGA2-204ENST00000403681 XBP1P17861 261 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 PIP4K2AP48426 406 aaPredicted RBP16.09■□□□□ 0.17
HMGA2-204ENST00000403681 RRP12Q5JTH9 1297 aaKnown RBP16.09■□□□□ 0.17
HMGA2-204ENST00000403681 KIAA0754O94854 1291 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 USP8P40818 1118 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 NAP1L1P55209 391 aaKnown RBP16.09■□□□□ 0.17
HMGA2-204ENST00000403681 KARSQ15046 597 aaKnown RBP16.09■□□□□ 0.17
HMGA2-204ENST00000403681 CHST3Q7LGC8 479 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 NLRP2Q9NX02 1062 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 CEP126Q9P2H0 1117 aa16.09■□□□□ 0.17
HMGA2-204ENST00000403681 ZCCHC11Q5TAX3 1644 aaKnown RBP16.08■□□□□ 0.17
HMGA2-204ENST00000403681 OAS2P29728 719 aaKnown RBP16.08■□□□□ 0.17
HMGA2-204ENST00000403681 FANCCQ00597 558 aa16.08■□□□□ 0.17
HMGA2-204ENST00000403681 ARID5BQ14865 1188 aa16.08■□□□□ 0.17
HMGA2-204ENST00000403681 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.17
HMGA2-204ENST00000403681 CDC25BP30305 580 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 ETF1P62495 437 aaKnown RBP16.08■□□□□ 0.16
HMGA2-204ENST00000403681 SART3Q15020 963 aaKnown RBP16.08■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC148Q8NFR7 591 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
HMGA2-204ENST00000403681 AK9Q5TCS8 1911 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 KSR2Q6VAB6 950 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 MAP9Q49MG5 647 aa16.08■□□□□ 0.16
HMGA2-204ENST00000403681 PHACTR2O75167 634 aa16.07■□□□□ 0.16
HMGA2-204ENST00000403681 IRX3P78415 501 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 PUF60Q9UHX1 559 aaKnown RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 KLF18A0A0U1RQI7 1052 aa16.07■□□□□ 0.16
HMGA2-204ENST00000403681 C11orf57Q6ZUT1 292 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC47Q96A33 483 aaKnown RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 RAI14Q9P0K7 980 aa16.07■□□□□ 0.16
HMGA2-204ENST00000403681 MORC2Q9Y6X9 1032 aaPredicted RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 MYL5Q02045 173 aa16.07■□□□□ 0.16
HMGA2-204ENST00000403681 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
HMGA2-204ENST00000403681 SMC1AQ14683 1233 aaKnown RBP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 ZSCAN26Q16670 478 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 KMT5BQ4FZB7 885 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 A0A087WWV3 80 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 CTIFO43310 598 aaKnown RBP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 NCOA5Q9HCD5 579 aaKnown RBP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 TBC1D2BQ9UPU7 963 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 TTC14Q96N46 770 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 USP28Q96RU2 1077 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 LLPHQ9BRT6 129 aaKnown RBP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.06■□□□□ 0.16
HMGA2-204ENST00000403681 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 LZTFL1Q9NQ48 299 aa16.06■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC175P0C221 793 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC129Q6ZRS4 1044 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 FLT4P35916 1363 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 NAA16Q6N069 864 aaPredicted RBP16.05■□□□□ 0.16
HMGA2-204ENST00000403681 GPATCH11Q8N954 259 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 RNF216Q9NWF9 866 aaPredicted RBP16.05■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC144BQ3MJ40 725 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
HMGA2-204ENST00000403681 CTAGE15A4D2H0 777 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 ZNF213O14771 459 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 CTAGE8P0CG41 777 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 CTAGE6Q86UF2 777 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 CTAGE4Q8IX94 777 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 CEP112Q8N8E3 955 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 CTR9Q6PD62 1173 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 MPHOSPH8Q99549 860 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 A0A087WZG4 1122 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 A0A0D9SFI3 127 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 MAP4K1Q92918 833 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 FAM107BQ9H098 131 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 MAGEC2Q9UBF1 373 aaPredicted RBP16.04■□□□□ 0.16
HMGA2-204ENST00000403681 SHTN1A0MZ66 631 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 KIAA1328Q86T90 577 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 PLA2G4DQ86XP0 818 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 PI4K2BQ8TCG2 481 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 PPP1R13BQ96KQ4 1090 aa16.04■□□□□ 0.16
HMGA2-204ENST00000403681 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-204ENST00000403681 OTUD7BQ6GQQ9 843 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 KIAA1468Q9P260 1216 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 POGZQ7Z3K3 1410 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 MCM3P25205 808 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 CLCN6P51797 869 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 NUP133Q8WUM0 1156 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 BICC1Q9H694 974 aaKnown RBP16.03■□□□□ 0.16
HMGA2-204ENST00000403681 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 RPAP1Q9BWH6 1393 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-204ENST00000403681 IQGAP1P46940 1657 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 ZNF202O95125 648 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 RHOXF2BP0C7M4 288 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 HNRNPH2P55795 449 aaKnown RBP16.03■□□□□ 0.16
HMGA2-204ENST00000403681 TTC31Q49AM3 519 aaPredicted RBP16.03■□□□□ 0.16
HMGA2-204ENST00000403681 HDXQ7Z353 690 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 WASF1Q92558 559 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 RHOXF2Q9BQY4 288 aa16.03■□□□□ 0.16
HMGA2-204ENST00000403681 CPSF1Q10570 1443 aaKnown RBP16.02■□□□□ 0.16
HMGA2-204ENST00000403681 CCDC82Q8N4S0 544 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms