RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 CNNM1Q9NRU3 951 aa21.47■■□□□ 1.03
PTCHD3P3-201ENST00000403073 RNF181Q9P0P0 153 aa21.47■■□□□ 1.03
PTCHD3P3-201ENST00000403073 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
PTCHD3P3-201ENST00000403073 WTIPA6NIX2 430 aaPredicted RBP21.46■■□□□ 1.03
PTCHD3P3-201ENST00000403073 SRGAP3O43295 1099 aa21.46■■□□□ 1.03
PTCHD3P3-201ENST00000403073 ZBTB40Q9NUA8 1239 aa21.46■■□□□ 1.03
PTCHD3P3-201ENST00000403073 C6orf229H3BNL8 230 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 PTPN12Q05209 780 aaKnown RBP21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 CHRNDQ07001 517 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 MTX1Q13505 466 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 LRRC24Q50LG9 513 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 SUPT20HQ8NEM7 779 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 HELBQ8NG08 1087 aaPredicted RBP21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 TBC1D16Q8TBP0 767 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 PODXL2Q9NZ53 605 aa21.45■■□□□ 1.02
PTCHD3P3-201ENST00000403073 PNMA6EA0A0J9YXQ4 647 aa21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 ATP8B2P98198 1209 aa21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 GPR101Q96P66 508 aaPredicted RBP21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 GGA1Q9UJY5 639 aa21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 MYH3P11055 1940 aa21.44■■□□□ 1.02
PTCHD3P3-201ENST00000403073 TAF5LO75529 589 aa21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 UFL1O94874 794 aa21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 ANKRD2Q9GZV1 360 aa21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 CHMP4BQ9H444 224 aaKnown RBP21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 PA2G4Q9UQ80 394 aaKnown RBP21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 RIPOR2Q9Y4F9 1068 aa21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 XDHP47989 1333 aa21.43■■□□□ 1.02
PTCHD3P3-201ENST00000403073 RIMBP2O15034 1052 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 ATP2B4P23634 1241 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 AOC3Q16853 763 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 CRBNQ96SW2 442 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 SIL1Q9H173 461 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 UTRNP46939 3433 aa21.42■■□□□ 1.02
PTCHD3P3-201ENST00000403073 SNAP23O00161 211 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 EYA2O00167 538 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 PPIP5K2O43314 1243 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 WASHC4Q2M389 1173 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 CEP85Q6P2H3 762 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 LARGE2Q8N3Y3 721 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 COPRSQ9NQ92 184 aa21.41■■□□□ 1.02
PTCHD3P3-201ENST00000403073 YY1P25490 414 aa21.4■■□□□ 1.02
PTCHD3P3-201ENST00000403073 FER1L6Q2WGJ9 1857 aa21.4■■□□□ 1.02
PTCHD3P3-201ENST00000403073 LRRC37AA6NMS7 1700 aa21.4■■□□□ 1.02
PTCHD3P3-201ENST00000403073 KIAA2012Q0VF49 1180 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 POLA2Q14181 598 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 ATG9AQ7Z3C6 839 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 SSH3Q8TE77 659 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 EYA3Q99504 573 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 VPS33BQ9H267 617 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 LEMD3Q9Y2U8 911 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 DUOX1Q9NRD9 1551 aa21.39■■□□□ 1.01
PTCHD3P3-201ENST00000403073 ZNF804BA4D1E1 1349 aa21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 MROH5Q6ZUA9 1318 aa21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 KCNJ4P48050 445 aa21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 METTL24Q5JXM2 366 aa21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 JDP2Q8WYK2 163 aa21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 ZC3H12CQ9C0D7 883 aaKnown RBP21.38■■□□□ 1.01
PTCHD3P3-201ENST00000403073 CIAO1O76071 339 aa21.37■■□□□ 1.01
PTCHD3P3-201ENST00000403073 DOK7Q18PE1 504 aa21.37■■□□□ 1.01
PTCHD3P3-201ENST00000403073 KLRK1P26718 216 aa21.36■■□□□ 1.01
PTCHD3P3-201ENST00000403073 SIRT2Q8IXJ6 389 aa21.36■■□□□ 1.01
PTCHD3P3-201ENST00000403073 RPAP2Q8IXW5 612 aaPredicted RBP21.36■■□□□ 1.01
PTCHD3P3-201ENST00000403073 NIM1KQ8IY84 436 aa21.36■■□□□ 1.01
PTCHD3P3-201ENST00000403073 FBXO3Q9UK99 471 aa21.36■■□□□ 1.01
PTCHD3P3-201ENST00000403073 COL4A5P29400 1685 aa21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 SPEF2Q9C093 1822 aa21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 IL15P40933 162 aaPredicted RBP21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 TXNRD3Q86VQ6 643 aa21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 VGLL2Q8N8G2 317 aa21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 DBNDD1Q9H9R9 158 aa21.35■■□□□ 1.01
PTCHD3P3-201ENST00000403073 FZD9O00144 591 aa21.34■■□□□ 1.01
PTCHD3P3-201ENST00000403073 SURF6O75683 361 aaKnown RBP21.34■■□□□ 1.01
PTCHD3P3-201ENST00000403073 PDE8BO95263 885 aa21.34■■□□□ 1.01
PTCHD3P3-201ENST00000403073 IRX6P78412 446 aaPredicted RBP21.34■■□□□ 1.01
PTCHD3P3-201ENST00000403073 LTBP1Q14766 1721 aa21.34■■□□□ 1.01
PTCHD3P3-201ENST00000403073 G3V3G9 751 aa21.33■■□□□ 1.01
PTCHD3P3-201ENST00000403073 G3BP1Q13283 466 aaKnown RBP eCLIP21.33■■□□□ 1.01
PTCHD3P3-201ENST00000403073 DCAF8Q5TAQ9 597 aa21.33■■□□□ 1.01
PTCHD3P3-201ENST00000403073 CEP126Q9P2H0 1117 aa21.33■■□□□ 1.01
PTCHD3P3-201ENST00000403073 ZNRF3Q9ULT6 936 aa21.33■■□□□ 1.01
PTCHD3P3-201ENST00000403073 UBE4AQ14139 1066 aa21.32■■□□□ 1
PTCHD3P3-201ENST00000403073 EXOC6Q8TAG9 804 aa21.32■■□□□ 1
PTCHD3P3-201ENST00000403073 ZNF526Q8TF50 670 aaPredicted RBP21.32■■□□□ 1
PTCHD3P3-201ENST00000403073 MED23Q9ULK4 1368 aa21.32■■□□□ 1
PTCHD3P3-201ENST00000403073 ZNF541Q9H0D2 1346 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 ZC3H4Q9UPT8 1303 aaKnown RBP21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 IRS2Q9Y4H2 1338 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 YDJCA8MPS7 323 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 ECE2O60344 883 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 TFCP2Q12800 502 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 KCNQ5Q9NR82 932 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 NOP58Q9Y2X3 529 aaKnown RBP21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 PCDHB15Q9Y5E8 787 aa21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.31■■□□□ 1
PTCHD3P3-201ENST00000403073 SBF1O95248 1867 aa21.3■■□□□ 1
PTCHD3P3-201ENST00000403073 HMMRO75330 724 aa21.3■■□□□ 1
PTCHD3P3-201ENST00000403073 SASH1O94885 1247 aa21.3■■□□□ 1
PTCHD3P3-201ENST00000403073 EIF6P56537 245 aaKnown RBP21.3■■□□□ 1
PTCHD3P3-201ENST00000403073 OS9Q13438 667 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms