RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 EYA2O00167 538 aa19.82■□□□□ 0.76
HMGA1-204ENST00000401473 CNNM1Q9NRU3 951 aa19.82■□□□□ 0.76
HMGA1-204ENST00000401473 SURF6O75683 361 aaKnown RBP19.82■□□□□ 0.76
HMGA1-204ENST00000401473 HELBQ8NG08 1087 aaPredicted RBP19.82■□□□□ 0.76
HMGA1-204ENST00000401473 NOP58Q9Y2X3 529 aaKnown RBP19.82■□□□□ 0.76
HMGA1-204ENST00000401473 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.82■□□□□ 0.76
HMGA1-204ENST00000401473 ARFGEF1Q9Y6D6 1849 aa19.82■□□□□ 0.76
HMGA1-204ENST00000401473 NEFLP07196 543 aa19.81■□□□□ 0.76
HMGA1-204ENST00000401473 CHRNDQ07001 517 aa19.81■□□□□ 0.76
HMGA1-204ENST00000401473 TMC4Q7Z404 712 aa19.81■□□□□ 0.76
HMGA1-204ENST00000401473 SNED1Q8TER0 1413 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 SNAP23O00161 211 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 TAF5LO75529 589 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 IGHDP01880 384 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 GPSM2P81274 684 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 ARHGAP27Q6ZUM4 889 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 NSFL1CQ9UNZ2 370 aaKnown RBP19.8■□□□□ 0.76
HMGA1-204ENST00000401473 EXOC6BQ9Y2D4 811 aa19.8■□□□□ 0.76
HMGA1-204ENST00000401473 NFKBIEO00221 500 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 GRIN3BO60391 1043 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 HMMRO75330 724 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 CIAO1O76071 339 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 FBXO3Q9UK99 471 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 SASH1O94885 1247 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 LRRC37AA6NMS7 1700 aa19.79■□□□□ 0.76
HMGA1-204ENST00000401473 HDAC1Q13547 482 aaPredicted RBP19.78■□□□□ 0.76
HMGA1-204ENST00000401473 VGLL2Q8N8G2 317 aa19.78■□□□□ 0.76
HMGA1-204ENST00000401473 PRELPP51888 382 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.76
HMGA1-204ENST00000401473 CCDC93Q567U6 631 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 CC2D2BQ6DHV5 1058 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 MPNDQ8N594 471 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 DCTPP1Q9H773 170 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 PODXL2Q9NZ53 605 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 ANKIB1Q9P2G1 1089 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 POLLQ9UGP5 575 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 IL15P40933 162 aaPredicted RBP19.77■□□□□ 0.76
HMGA1-204ENST00000401473 RASSF7Q02833 373 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 FER1L6Q2WGJ9 1857 aa19.77■□□□□ 0.76
HMGA1-204ENST00000401473 MROH5Q6ZUA9 1318 aa19.76■□□□□ 0.75
HMGA1-204ENST00000401473 PDE8BO95263 885 aa19.76■□□□□ 0.75
HMGA1-204ENST00000401473 METTL24Q5JXM2 366 aa19.76■□□□□ 0.75
HMGA1-204ENST00000401473 TMX4Q9H1E5 349 aaPredicted RBP19.76■□□□□ 0.75
HMGA1-204ENST00000401473 DCAF8L1A6NGE4 600 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 TFCP2Q12800 502 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 SOGA3Q5TF21 947 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 DPP8Q6V1X1 898 aaPredicted RBP19.75■□□□□ 0.75
HMGA1-204ENST00000401473 RTKN2Q8IZC4 609 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 LTBP1Q14766 1721 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 XDHP47989 1333 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 TBC1D16Q8TBP0 767 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 GPR101Q96P66 508 aaPredicted RBP19.75■□□□□ 0.75
HMGA1-204ENST00000401473 ANKRD2Q9GZV1 360 aa19.75■□□□□ 0.75
HMGA1-204ENST00000401473 A0A1B0GUL6 1792 aa19.74■□□□□ 0.75
HMGA1-204ENST00000401473 APBB1O00213 710 aa19.74■□□□□ 0.75
HMGA1-204ENST00000401473 RTFDC1Q9BY42 306 aaPredicted RBP19.74■□□□□ 0.75
HMGA1-204ENST00000401473 CEP126Q9P2H0 1117 aa19.74■□□□□ 0.75
HMGA1-204ENST00000401473 DUOX1Q9NRD9 1551 aa19.73■□□□□ 0.75
HMGA1-204ENST00000401473 RWDD1Q9H446 243 aaPredicted RBP19.73■□□□□ 0.75
HMGA1-204ENST00000401473 OS9Q13438 667 aaPredicted RBP19.73■□□□□ 0.75
HMGA1-204ENST00000401473 GRIPAP1Q4V328 841 aa19.73■□□□□ 0.75
HMGA1-204ENST00000401473 TXNRD3Q86VQ6 643 aa19.73■□□□□ 0.75
HMGA1-204ENST00000401473 PSMD1Q99460 953 aa19.73■□□□□ 0.75
HMGA1-204ENST00000401473 TAOK3Q9H2K8 898 aa19.73■□□□□ 0.75
HMGA1-204ENST00000401473 ZNF804BA4D1E1 1349 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 C6orf229H3BNL8 230 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 UFL1O94874 794 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 KLRK1P26718 216 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 TIMM10P62072 90 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 FKBP4Q02790 459 aaKnown RBP eCLIP19.72■□□□□ 0.75
HMGA1-204ENST00000401473 RHPN1Q8TCX5 695 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 ZNF277Q9NRM2 450 aaPredicted RBP19.72■□□□□ 0.75
HMGA1-204ENST00000401473 GGA1Q9UJY5 639 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 LEMD3Q9Y2U8 911 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 CCDC88AQ3V6T2 1871 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 LTBP3Q9NS15 1303 aa19.72■□□□□ 0.75
HMGA1-204ENST00000401473 FGFR2P21802 821 aa19.71■□□□□ 0.75
HMGA1-204ENST00000401473 ATP2B4P23634 1241 aa19.71■□□□□ 0.75
HMGA1-204ENST00000401473 HSP90AB4PQ58FF6 505 aa19.71■□□□□ 0.75
HMGA1-204ENST00000401473 SBF1O95248 1867 aa19.71■□□□□ 0.75
HMGA1-204ENST00000401473 IRS2Q9Y4H2 1338 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 RAB11FIP3O75154 756 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 UBE4AQ14139 1066 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 ERICH6BQ5W0A0 696 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 SMC5Q8IY18 1101 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 IL1RAPL2Q9NP60 686 aa19.7■□□□□ 0.74
HMGA1-204ENST00000401473 SMARCA5O60264 1052 aaPredicted RBP19.69■□□□□ 0.74
HMGA1-204ENST00000401473 WASHC4Q2M389 1173 aa19.69■□□□□ 0.74
HMGA1-204ENST00000401473 KIF1BPQ96EK5 621 aa19.69■□□□□ 0.74
HMGA1-204ENST00000401473 RIMBP2O15034 1052 aa19.69■□□□□ 0.74
HMGA1-204ENST00000401473 PUM3Q15397 648 aaKnown RBP19.69■□□□□ 0.74
HMGA1-204ENST00000401473 ERC1Q8IUD2 1116 aa19.69■□□□□ 0.74
HMGA1-204ENST00000401473 LMNB1P20700 586 aa19.68■□□□□ 0.74
HMGA1-204ENST00000401473 KCNJ4P48050 445 aa19.68■□□□□ 0.74
HMGA1-204ENST00000401473 AOC3Q16853 763 aa19.68■□□□□ 0.74
HMGA1-204ENST00000401473 EAF2Q96CJ1 260 aaPredicted RBP19.68■□□□□ 0.74
HMGA1-204ENST00000401473 GCC1Q96CN9 775 aa19.68■□□□□ 0.74
HMGA1-204ENST00000401473 BCL11AQ9H165 835 aa19.68■□□□□ 0.74
HMGA1-204ENST00000401473 A0A1B0GUL7 405 aa19.67■□□□□ 0.74
HMGA1-204ENST00000401473 ATP2B3Q16720 1220 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms