RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 KLRG1Q96E93 195 aa18.9■□□□□ 0.62
SMIM11A-203ENST00000399299 GGA1Q9UJY5 639 aa18.9■□□□□ 0.62
SMIM11A-203ENST00000399299 RAD17O75943 681 aa18.89■□□□□ 0.61
SMIM11A-203ENST00000399299 TRMT2AQ8IZ69 625 aaKnown RBP18.89■□□□□ 0.61
SMIM11A-203ENST00000399299 ZC3H12CQ9C0D7 883 aaKnown RBP18.89■□□□□ 0.61
SMIM11A-203ENST00000399299 ADARB2Q9NS39 739 aaKnown RBP18.89■□□□□ 0.61
SMIM11A-203ENST00000399299 CLEC11AQ9Y240 323 aa18.89■□□□□ 0.61
SMIM11A-203ENST00000399299 PSME4Q14997 1843 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 RIMBP2O15034 1052 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 ECE2O60344 883 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 ALDH1L1O75891 902 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 ITGBL1O95965 494 aaPredicted RBP18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 GMPSP49915 693 aaPredicted RBP18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 MRPL50Q8N5N7 158 aaKnown RBP18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 DBNDD1Q9H9R9 158 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 SCN9AQ15858 1988 aa18.88■□□□□ 0.61
SMIM11A-203ENST00000399299 PTPRCP08575 1304 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 ITGA6P23229 1130 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 FAM161AQ3B820 660 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 BCL2L13Q9BXK5 485 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 CREBZFQ9NS37 354 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 MINPP1Q9UNW1 487 aa18.87■□□□□ 0.61
SMIM11A-203ENST00000399299 GRM8O00222 908 aa18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 IGHMBP2P38935 993 aaKnown RBP18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 CNTROBQ8N137 903 aa18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 DPF2Q92785 391 aa18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 CDCA7LQ96GN5 454 aa18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 GPR101Q96P66 508 aaPredicted RBP18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 SRCIN1Q9C0H9 1055 aa18.86■□□□□ 0.61
SMIM11A-203ENST00000399299 ZNF609O15014 1411 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 MED23Q9ULK4 1368 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 PSMD14O00487 310 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 CT47B1P0C2W7 299 aaPredicted RBP18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 FOXO4P98177 505 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 ALDH1L2Q3SY69 923 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 MAP1SQ66K74 1059 aaPredicted RBP18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 SLC4A10Q6U841 1118 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 JMYQ8N9B5 988 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 SSH1Q8WYL5 1049 aa18.85■□□□□ 0.61
SMIM11A-203ENST00000399299 A0A1B0GUL6 1792 aa18.84■□□□□ 0.61
SMIM11A-203ENST00000399299 RPS12P25398 132 aaKnown RBP18.84■□□□□ 0.61
SMIM11A-203ENST00000399299 DOK7Q18PE1 504 aa18.84■□□□□ 0.61
SMIM11A-203ENST00000399299 C9orf78Q9NZ63 289 aaPredicted RBP18.84■□□□□ 0.61
SMIM11A-203ENST00000399299 ANKRD18BA2A2Z9 1011 aa18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 CCT4P50991 539 aaKnown RBP18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 MPHOSPH8Q99549 860 aa18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 CNOT7Q9UIV1 285 aaKnown RBP18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 LEMD3Q9Y2U8 911 aa18.83■□□□□ 0.6
SMIM11A-203ENST00000399299 TRPM7Q96QT4 1865 aa18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 UTYO14607 1347 aa18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 G3V3G9 751 aa18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 DCAF8Q5TAQ9 597 aa18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 DIEXFQ68CQ4 756 aaKnown RBP18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 ZC3H15Q8WU90 426 aaKnown RBP18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 PGAP2Q9UHJ9 254 aa18.82■□□□□ 0.6
SMIM11A-203ENST00000399299 PCNTO95613 3336 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 TMEM88BA6NKF7 163 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 H7C1D1 291 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 VIL1P09327 827 aaKnown RBP18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 IFIT5Q13325 482 aaKnown RBP18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 PODNQ7Z5L7 613 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 MICALL2Q8IY33 904 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 KCNQ5Q9NR82 932 aa18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 ZBTB12Q9Y330 459 aaPredicted RBP18.81■□□□□ 0.6
SMIM11A-203ENST00000399299 ZNF646O15015 1829 aaPredicted RBP18.8■□□□□ 0.6
SMIM11A-203ENST00000399299 EPHA10Q5JZY3 1008 aa18.8■□□□□ 0.6
SMIM11A-203ENST00000399299 LMBR1LQ6UX01 489 aa18.8■□□□□ 0.6
SMIM11A-203ENST00000399299 TRPM4Q8TD43 1214 aa18.79■□□□□ 0.6
SMIM11A-203ENST00000399299 SMC4Q9NTJ3 1288 aa18.79■□□□□ 0.6
SMIM11A-203ENST00000399299 CNTNAP1P78357 1384 aa18.79■□□□□ 0.6
SMIM11A-203ENST00000399299 ZNF804BA4D1E1 1349 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 SHTN1A0MZ66 631 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 WTIPA6NIX2 430 aaPredicted RBP18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 HIRAP54198 1017 aaPredicted RBP18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 BRPF1P55201 1214 aaPredicted RBP18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 CHRNDQ07001 517 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 CCDC57Q2TAC2 916 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 MIER1Q8N108 512 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 AGBL3Q8NEM8 1001 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 CHMP3Q9Y3E7 222 aa18.78■□□□□ 0.6
SMIM11A-203ENST00000399299 NBPF7P0C2Y1 421 aaPredicted RBP18.77■□□□□ 0.6
SMIM11A-203ENST00000399299 RSBN1LQ6PCB5 846 aaPredicted RBP18.77■□□□□ 0.6
SMIM11A-203ENST00000399299 KAZALD1Q96I82 304 aa18.77■□□□□ 0.6
SMIM11A-203ENST00000399299 SUCLG2Q96I99 432 aa18.77■□□□□ 0.6
SMIM11A-203ENST00000399299 COA1Q9GZY4 146 aa18.77■□□□□ 0.6
SMIM11A-203ENST00000399299 USP17L3A6NCW0 530 aa18.76■□□□□ 0.59
SMIM11A-203ENST00000399299 USP17L4A6NCW7 530 aa18.76■□□□□ 0.59
SMIM11A-203ENST00000399299 USP17L1Q7RTZ2 530 aa18.76■□□□□ 0.59
SMIM11A-203ENST00000399299 ZNF280AP59817 542 aaPredicted RBP18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 RABL6Q3YEC7 729 aaPredicted RBP18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 TAF7LQ5H9L4 462 aa18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 C15orf52Q6ZUT6 534 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 SAMD7Q7Z3H4 446 aa18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 TXNRD3Q86VQ6 643 aa18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 GMLQ99445 158 aa18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 MKRN1Q9UHC7 482 aaKnown RBP18.75■□□□□ 0.59
SMIM11A-203ENST00000399299 RASSF10A6NK89 507 aa18.74■□□□□ 0.59
SMIM11A-203ENST00000399299 KCNJ4P48050 445 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms