RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 ITGA6P23229 1130 aa18.4■□□□□ 0.54
SEC13-208ENST00000397109 EPHX2P34913 555 aa18.4■□□□□ 0.54
SEC13-208ENST00000397109 CXCL9Q07325 125 aa18.4■□□□□ 0.54
SEC13-208ENST00000397109 CIAPIN1Q6FI81 312 aa18.4■□□□□ 0.54
SEC13-208ENST00000397109 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
SEC13-208ENST00000397109 BCL2L13Q9BXK5 485 aa18.4■□□□□ 0.54
SEC13-208ENST00000397109 ZC3H12CQ9C0D7 883 aaKnown RBP18.4■□□□□ 0.54
SEC13-208ENST00000397109 UFL1O94874 794 aa18.39■□□□□ 0.54
SEC13-208ENST00000397109 ATP2B4P23634 1241 aa18.39■□□□□ 0.54
SEC13-208ENST00000397109 CHADLQ6NUI6 762 aa18.39■□□□□ 0.54
SEC13-208ENST00000397109 LDHDQ86WU2 507 aa18.39■□□□□ 0.54
SEC13-208ENST00000397109 ANKRD18BA2A2Z9 1011 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 RIMBP2O15034 1052 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 BRPF1P55201 1214 aaPredicted RBP18.39■□□□□ 0.53
SEC13-208ENST00000397109 FOXO4P98177 505 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 MPHOSPH8Q99549 860 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 MINPP1Q9UNW1 487 aa18.39■□□□□ 0.53
SEC13-208ENST00000397109 LTBP1Q14766 1721 aa18.38■□□□□ 0.53
SEC13-208ENST00000397109 G3V3G9 751 aa18.38■□□□□ 0.53
SEC13-208ENST00000397109 IFIT5Q13325 482 aaKnown RBP18.38■□□□□ 0.53
SEC13-208ENST00000397109 DCAF8Q5TAQ9 597 aa18.38■□□□□ 0.53
SEC13-208ENST00000397109 RAD17O75943 681 aa18.37■□□□□ 0.53
SEC13-208ENST00000397109 SCNN1DP51172 638 aa18.37■□□□□ 0.53
SEC13-208ENST00000397109 EAPPQ56P03 285 aaPredicted RBP18.37■□□□□ 0.53
SEC13-208ENST00000397109 UTYO14607 1347 aa18.37■□□□□ 0.53
SEC13-208ENST00000397109 YDJCA8MPS7 323 aa18.36■□□□□ 0.53
SEC13-208ENST00000397109 LMBR1LQ6UX01 489 aa18.36■□□□□ 0.53
SEC13-208ENST00000397109 ANKRD2Q9GZV1 360 aa18.36■□□□□ 0.53
SEC13-208ENST00000397109 DBNDD1Q9H9R9 158 aa18.36■□□□□ 0.53
SEC13-208ENST00000397109 CHMP3Q9Y3E7 222 aa18.36■□□□□ 0.53
SEC13-208ENST00000397109 ECE2O60344 883 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 RARSP54136 660 aaKnown RBP18.35■□□□□ 0.53
SEC13-208ENST00000397109 CCDC57Q2TAC2 916 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 GPRC5DQ9NZD1 345 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 CLEC11AQ9Y240 323 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 LEMD3Q9Y2U8 911 aa18.35■□□□□ 0.53
SEC13-208ENST00000397109 EPS15P42566 896 aa18.34■□□□□ 0.53
SEC13-208ENST00000397109 CCT4P50991 539 aaKnown RBP18.34■□□□□ 0.53
SEC13-208ENST00000397109 DOK7Q18PE1 504 aa18.34■□□□□ 0.53
SEC13-208ENST00000397109 EPHA10Q5JZY3 1008 aa18.34■□□□□ 0.53
SEC13-208ENST00000397109 USP50Q70EL3 339 aaPredicted RBP18.34■□□□□ 0.53
SEC13-208ENST00000397109 GPR101Q96P66 508 aaPredicted RBP18.34■□□□□ 0.53
SEC13-208ENST00000397109 API5Q9BZZ5 524 aaKnown RBP18.34■□□□□ 0.53
SEC13-208ENST00000397109 GMPSP49915 693 aaPredicted RBP18.33■□□□□ 0.53
SEC13-208ENST00000397109 TAF7LQ5H9L4 462 aa18.33■□□□□ 0.53
SEC13-208ENST00000397109 SUCLG2Q96I99 432 aa18.33■□□□□ 0.53
SEC13-208ENST00000397109 ADARB2Q9NS39 739 aaKnown RBP18.33■□□□□ 0.53
SEC13-208ENST00000397109 NOB1Q9ULX3 412 aaKnown RBP18.33■□□□□ 0.53
SEC13-208ENST00000397109 SPEF2Q9C093 1822 aa18.33■□□□□ 0.52
SEC13-208ENST00000397109 NBPF7P0C2Y1 421 aaPredicted RBP18.33■□□□□ 0.52
SEC13-208ENST00000397109 KIF16BQ96L93 1317 aa18.32■□□□□ 0.52
SEC13-208ENST00000397109 PSMD14O00487 310 aa18.32■□□□□ 0.52
SEC13-208ENST00000397109 RPS12P25398 132 aaKnown RBP18.32■□□□□ 0.52
SEC13-208ENST00000397109 ARHGAP45Q92619 1136 aa18.32■□□□□ 0.52
SEC13-208ENST00000397109 DPF2Q92785 391 aa18.32■□□□□ 0.52
SEC13-208ENST00000397109 MED23Q9ULK4 1368 aa18.32■□□□□ 0.52
SEC13-208ENST00000397109 CHRNDQ07001 517 aa18.31■□□□□ 0.52
SEC13-208ENST00000397109 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
SEC13-208ENST00000397109 USP44Q9H0E7 712 aa18.31■□□□□ 0.52
SEC13-208ENST00000397109 H7C1D1 291 aa18.3■□□□□ 0.52
SEC13-208ENST00000397109 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
SEC13-208ENST00000397109 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
SEC13-208ENST00000397109 KCNJ4P48050 445 aa18.3■□□□□ 0.52
SEC13-208ENST00000397109 RABL6Q3YEC7 729 aaPredicted RBP18.3■□□□□ 0.52
SEC13-208ENST00000397109 LDHAL6AQ6ZMR3 332 aa18.3■□□□□ 0.52
SEC13-208ENST00000397109 KAZALD1Q96I82 304 aa18.3■□□□□ 0.52
SEC13-208ENST00000397109 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
SEC13-208ENST00000397109 ZNF804BA4D1E1 1349 aa18.3■□□□□ 0.52
SEC13-208ENST00000397109 CEP350Q5VT06 3117 aa18.29■□□□□ 0.52
SEC13-208ENST00000397109 ADAMTSL1Q8N6G6 1762 aa18.29■□□□□ 0.52
SEC13-208ENST00000397109 CNTROBQ8N137 903 aa18.29■□□□□ 0.52
SEC13-208ENST00000397109 BICC1Q9H694 974 aaKnown RBP18.29■□□□□ 0.52
SEC13-208ENST00000397109 CNNM1Q9NRU3 951 aa18.29■□□□□ 0.52
SEC13-208ENST00000397109 HDAC5Q9UQL6 1122 aa18.29■□□□□ 0.52
SEC13-208ENST00000397109 COA1Q9GZY4 146 aa18.28■□□□□ 0.52
SEC13-208ENST00000397109 KCNQ5Q9NR82 932 aa18.28■□□□□ 0.52
SEC13-208ENST00000397109 ZBTB12Q9Y330 459 aaPredicted RBP18.28■□□□□ 0.52
SEC13-208ENST00000397109 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
SEC13-208ENST00000397109 ITGBL1O95965 494 aaPredicted RBP18.27■□□□□ 0.52
SEC13-208ENST00000397109 MAP1SQ66K74 1059 aaPredicted RBP18.27■□□□□ 0.52
SEC13-208ENST00000397109 MICALL2Q8IY33 904 aa18.27■□□□□ 0.52
SEC13-208ENST00000397109 DNAJC5GQ8N7S2 189 aa18.27■□□□□ 0.52
SEC13-208ENST00000397109 ZNF594Q96JF6 807 aaPredicted RBP18.27■□□□□ 0.52
SEC13-208ENST00000397109 PASKQ96RG2 1323 aa18.27■□□□□ 0.51
SEC13-208ENST00000397109 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 ZC3H15Q8WU90 426 aaKnown RBP18.26■□□□□ 0.51
SEC13-208ENST00000397109 SCN9AQ15858 1988 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 UBTFL1P0CB47 393 aaPredicted RBP18.26■□□□□ 0.51
SEC13-208ENST00000397109 HTRA3P83110 453 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 RSBN1LQ6PCB5 846 aaPredicted RBP18.26■□□□□ 0.51
SEC13-208ENST00000397109 C15orf52Q6ZUT6 534 aaKnown RBP18.26■□□□□ 0.51
SEC13-208ENST00000397109 ANKRD44Q8N8A2 993 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 CREBZFQ9NS37 354 aa18.26■□□□□ 0.51
SEC13-208ENST00000397109 TAF5LO75529 589 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 236.4 ms