RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 H0YIN7 160 aa13.32□□□□□ -0.28
NUP98-205ENST00000397007 ALDH1B1P30837 517 aa13.32□□□□□ -0.28
NUP98-205ENST00000397007 RPAP2Q8IXW5 612 aaPredicted RBP13.32□□□□□ -0.28
NUP98-205ENST00000397007 CNKSR1Q969H4 720 aa13.32□□□□□ -0.28
NUP98-205ENST00000397007 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
NUP98-205ENST00000397007 MED23Q9ULK4 1368 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
NUP98-205ENST00000397007 C9orf78Q9NZ63 289 aaPredicted RBP13.31□□□□□ -0.28
NUP98-205ENST00000397007 MINPP1Q9UNW1 487 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 ITPRIPQ8IWB1 547 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 TTLL6Q8N841 843 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 SASH1O94885 1247 aa13.31□□□□□ -0.28
NUP98-205ENST00000397007 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
NUP98-205ENST00000397007 PPEF1O14829 653 aaPredicted RBP13.3□□□□□ -0.28
NUP98-205ENST00000397007 FTSJ3Q8IY81 847 aaKnown RBP13.3□□□□□ -0.28
NUP98-205ENST00000397007 EXOC6Q8TAG9 804 aa13.3□□□□□ -0.28
NUP98-205ENST00000397007 RPS8P62241 208 aaKnown RBP13.29□□□□□ -0.28
NUP98-205ENST00000397007 DCTPP1Q9H773 170 aa13.29□□□□□ -0.28
NUP98-205ENST00000397007 CC2D2BQ6DHV5 1058 aa13.29□□□□□ -0.28
NUP98-205ENST00000397007 PUS3Q9BZE2 481 aaKnown RBP13.29□□□□□ -0.28
NUP98-205ENST00000397007 GPR108Q9NPR9 543 aa13.29□□□□□ -0.28
NUP98-205ENST00000397007 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
NUP98-205ENST00000397007 WTIPA6NIX2 430 aaPredicted RBP13.28□□□□□ -0.28
NUP98-205ENST00000397007 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 GPSM2P81274 684 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 LRRC24Q50LG9 513 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 POLLQ9UGP5 575 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 MROH5Q6ZUA9 1318 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 ZNF594Q96JF6 807 aaPredicted RBP13.28□□□□□ -0.28
NUP98-205ENST00000397007 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
NUP98-205ENST00000397007 EYA2O00167 538 aa13.27□□□□□ -0.28
NUP98-205ENST00000397007 DALRD3Q5D0E6 543 aaKnown RBP13.27□□□□□ -0.28
NUP98-205ENST00000397007 ERICH6BQ5W0A0 696 aa13.27□□□□□ -0.28
NUP98-205ENST00000397007 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.29
NUP98-205ENST00000397007 SIPA1L1O43166 1804 aa13.27□□□□□ -0.29
NUP98-205ENST00000397007 ANKRD18BA2A2Z9 1011 aa13.27□□□□□ -0.29
NUP98-205ENST00000397007 RTL5Q5HYW3 569 aaPredicted RBP13.27□□□□□ -0.29
NUP98-205ENST00000397007 FKBP4Q02790 459 aaKnown RBP eCLIP13.26□□□□□ -0.29
NUP98-205ENST00000397007 KLHDC4Q8TBB5 520 aa13.26□□□□□ -0.29
NUP98-205ENST00000397007 PDS5AQ29RF7 1337 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 ZC3H4Q9UPT8 1303 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 SOGA3Q5TF21 947 aa13.26□□□□□ -0.29
NUP98-205ENST00000397007 DDX46Q7L014 1031 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 CDC5LQ99459 802 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 CHRNDQ07001 517 aa13.26□□□□□ -0.29
NUP98-205ENST00000397007 IFIT5Q13325 482 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 TBC1D16Q8TBP0 767 aa13.26□□□□□ -0.29
NUP98-205ENST00000397007 RPGRQ92834 1020 aaKnown RBP13.26□□□□□ -0.29
NUP98-205ENST00000397007 IGHDP01880 384 aa13.25□□□□□ -0.29
NUP98-205ENST00000397007 ZNF512BQ96KM6 892 aaPredicted RBP13.25□□□□□ -0.29
NUP98-205ENST00000397007 XDHP47989 1333 aa13.25□□□□□ -0.29
NUP98-205ENST00000397007 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
NUP98-205ENST00000397007 PDE8BO95263 885 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 PA2G4Q9UQ80 394 aaKnown RBP13.24□□□□□ -0.29
NUP98-205ENST00000397007 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 IL1R1P14778 569 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 FZD9O00144 591 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 KIAA2012Q0VF49 1180 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 CCDC93Q567U6 631 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 RTKN2Q8IZC4 609 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 LEMD3Q9Y2U8 911 aa13.24□□□□□ -0.29
NUP98-205ENST00000397007 IL15P40933 162 aaPredicted RBP13.23□□□□□ -0.29
NUP98-205ENST00000397007 FBXO33Q7Z6M2 555 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 LAMA4Q16363 1823 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 KLRK1P26718 216 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 MYH2Q9UKX2 1941 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 UBE4AQ14139 1066 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 TXNRD3Q86VQ6 643 aa13.23□□□□□ -0.29
NUP98-205ENST00000397007 C21orf2O43822 256 aa13.22□□□□□ -0.29
NUP98-205ENST00000397007 CCDC57Q2TAC2 916 aa13.22□□□□□ -0.29
NUP98-205ENST00000397007 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
NUP98-205ENST00000397007 ANKRD2Q9GZV1 360 aa13.21□□□□□ -0.29
NUP98-205ENST00000397007 ATP2B4P23634 1241 aa13.21□□□□□ -0.3
NUP98-205ENST00000397007 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
NUP98-205ENST00000397007 ARID4AP29374 1257 aaPredicted RBP13.2□□□□□ -0.3
NUP98-205ENST00000397007 FKBP1AP62942 108 aaKnown RBP13.2□□□□□ -0.3
NUP98-205ENST00000397007 FAM205AQ6ZU69 1335 aa13.2□□□□□ -0.3
NUP98-205ENST00000397007 SALL1Q9NSC2 1324 aa13.2□□□□□ -0.3
NUP98-205ENST00000397007 GTF2E1P29083 439 aaPredicted RBP13.19□□□□□ -0.3
NUP98-205ENST00000397007 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.19□□□□□ -0.3
NUP98-205ENST00000397007 ZNF622Q969S3 477 aaKnown RBP eCLIP13.19□□□□□ -0.38e-10■□□□□ 10.6
NUP98-205ENST00000397007 GMLQ99445 158 aa13.19□□□□□ -0.3
NUP98-205ENST00000397007 IGHMBP2P38935 993 aaKnown RBP13.19□□□□□ -0.3
NUP98-205ENST00000397007 RASSF7Q02833 373 aa13.19□□□□□ -0.3
NUP98-205ENST00000397007 FAM84BQ96KN1 310 aaPredicted RBP13.19□□□□□ -0.3
NUP98-205ENST00000397007 CCDC85AQ96PX6 553 aaPredicted RBP13.19□□□□□ -0.3
NUP98-205ENST00000397007 LDHAL6AQ6ZMR3 332 aa13.19□□□□□ -0.3
NUP98-205ENST00000397007 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
NUP98-205ENST00000397007 TFCP2Q12800 502 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 PUM3Q15397 648 aaKnown RBP13.18□□□□□ -0.3
NUP98-205ENST00000397007 PPP1R1BQ9UD71 204 aaPredicted RBP13.18□□□□□ -0.3
NUP98-205ENST00000397007 NUCB1Q02818 461 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
NUP98-205ENST00000397007 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 RFX7Q2KHR2 1363 aa13.18□□□□□ -0.3
NUP98-205ENST00000397007 MPNDQ8N594 471 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms