RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 C6orf229H3BNL8 230 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 GPSM2P81274 684 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 MTX1Q13505 466 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 EYA3Q99504 573 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 C1orf115Q9H7X2 142 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 GGA1Q9UJY5 639 aa17.02■□□□□ 0.32
GAPDH-204ENST00000396859 UFL1O94874 794 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 CENPBP07199 599 aaPredicted RBP17.01■□□□□ 0.31
GAPDH-204ENST00000396859 ATP2B4P23634 1241 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 IARSP41252 1262 aaKnown RBP17.01■□□□□ 0.31
GAPDH-204ENST00000396859 KCNJ4P48050 445 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 C9orf131Q5VYM1 1079 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 RTFDC1Q9BY42 306 aaPredicted RBP17.01■□□□□ 0.31
GAPDH-204ENST00000396859 VPS33BQ9H267 617 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 ZNF277Q9NRM2 450 aaPredicted RBP17.01■□□□□ 0.31
GAPDH-204ENST00000396859 PODXL2Q9NZ53 605 aa17.01■□□□□ 0.31
GAPDH-204ENST00000396859 CHRNDQ07001 517 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 SLC51AQ86UW1 340 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 SNED1Q8TER0 1413 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 JDP2Q8WYK2 163 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 ZBTB40Q9NUA8 1239 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 FBXO3Q9UK99 471 aa17■□□□□ 0.31
GAPDH-204ENST00000396859 MROH5Q6ZUA9 1318 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 G3V3G9 751 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 PPIP5K2O43314 1243 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 RFX5P48382 616 aaPredicted RBP16.99■□□□□ 0.31
GAPDH-204ENST00000396859 ATP8B2P98198 1209 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 PTPN12Q05209 780 aaKnown RBP16.99■□□□□ 0.31
GAPDH-204ENST00000396859 WASHC4Q2M389 1173 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 DCAF8Q5TAQ9 597 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 LARGE2Q8N3Y3 721 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 KLHDC4Q8TBB5 520 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 TBC1D16Q8TBP0 767 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 LEMD3Q9Y2U8 911 aa16.99■□□□□ 0.31
GAPDH-204ENST00000396859 EYA2O00167 538 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 HMMRO75330 724 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 METTL24Q5JXM2 366 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 RPAP2Q8IXW5 612 aaPredicted RBP16.98■□□□□ 0.31
GAPDH-204ENST00000396859 PUS3Q9BZE2 481 aaKnown RBP16.98■□□□□ 0.31
GAPDH-204ENST00000396859 ZC3H12CQ9C0D7 883 aaKnown RBP16.98■□□□□ 0.31
GAPDH-204ENST00000396859 SIL1Q9H173 461 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 SBF1O95248 1867 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
GAPDH-204ENST00000396859 PNMA6EA0A0J9YXQ4 647 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 CIAO1O76071 339 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 AOC3Q16853 763 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 LRRC24Q50LG9 513 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 CEP85Q6P2H3 762 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 NIM1KQ8IY84 436 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 HELBQ8NG08 1087 aaPredicted RBP16.97■□□□□ 0.31
GAPDH-204ENST00000396859 CRBNQ96SW2 442 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 POLLQ9UGP5 575 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 RIPOR2Q9Y4F9 1068 aa16.97■□□□□ 0.31
GAPDH-204ENST00000396859 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
GAPDH-204ENST00000396859 RIMBP2O15034 1052 aa16.96■□□□□ 0.31
GAPDH-204ENST00000396859 TAF5LO75529 589 aa16.96■□□□□ 0.31
GAPDH-204ENST00000396859 IL15P40933 162 aaPredicted RBP16.96■□□□□ 0.31
GAPDH-204ENST00000396859 KIAA2012Q0VF49 1180 aa16.96■□□□□ 0.31
GAPDH-204ENST00000396859 G3BP1Q13283 466 aaKnown RBP eCLIP16.96■□□□□ 0.313e-47■□□□□ 11.1
GAPDH-204ENST00000396859 OS9Q13438 667 aaPredicted RBP16.96■□□□□ 0.31
GAPDH-204ENST00000396859 SSH3Q8TE77 659 aa16.96■□□□□ 0.31
GAPDH-204ENST00000396859 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
GAPDH-204ENST00000396859 LTBP1Q14766 1721 aa16.96■□□□□ 0.3
GAPDH-204ENST00000396859 ZNF804BA4D1E1 1349 aa16.96■□□□□ 0.3
GAPDH-204ENST00000396859 DUOX1Q9NRD9 1551 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 YY1P25490 414 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 PRELPP51888 382 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 AAMPQ13685 434 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 POLA2Q14181 598 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 CEP126Q9P2H0 1117 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
GAPDH-204ENST00000396859 TIAM2Q8IVF5 1701 aa16.95■□□□□ 0.3
GAPDH-204ENST00000396859 MED23Q9ULK4 1368 aa16.94■□□□□ 0.3
GAPDH-204ENST00000396859 DPY19L2Q6NUT2 758 aa16.94■□□□□ 0.3
GAPDH-204ENST00000396859 GOLGB1Q14789 3259 aaKnown RBP16.94■□□□□ 0.3
GAPDH-204ENST00000396859 A0A1B0GUL6 1792 aa16.93■□□□□ 0.3
GAPDH-204ENST00000396859 SURF6O75683 361 aaKnown RBP16.93■□□□□ 0.3
GAPDH-204ENST00000396859 PDE8BO95263 885 aa16.93■□□□□ 0.3
GAPDH-204ENST00000396859 EIF6P56537 245 aaKnown RBP16.93■□□□□ 0.3
GAPDH-204ENST00000396859 UBE4AQ14139 1066 aa16.93■□□□□ 0.3
GAPDH-204ENST00000396859 GPR101Q96P66 508 aaPredicted RBP16.93■□□□□ 0.3
GAPDH-204ENST00000396859 IFIT1P09914 478 aaKnown RBP16.92■□□□□ 0.3
GAPDH-204ENST00000396859 PUM3Q15397 648 aaKnown RBP16.92■□□□□ 0.3
GAPDH-204ENST00000396859 HSP90AB4PQ58FF6 505 aa16.92■□□□□ 0.3
GAPDH-204ENST00000396859 ATG9AQ7Z3C6 839 aa16.92■□□□□ 0.3
GAPDH-204ENST00000396859 ZNRF3Q9ULT6 936 aa16.92■□□□□ 0.3
GAPDH-204ENST00000396859 SLC5A1P13866 664 aa16.91■□□□□ 0.3
GAPDH-204ENST00000396859 ZNF804AQ7Z570 1209 aa16.91■□□□□ 0.3
GAPDH-204ENST00000396859 AKAP2Q9Y2D5 859 aa16.91■□□□□ 0.3
GAPDH-204ENST00000396859 ECE2O60344 883 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 DOK7Q18PE1 504 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 C15orf52Q6ZUT6 534 aaKnown RBP16.9■□□□□ 0.3
GAPDH-204ENST00000396859 ERC1Q8IUD2 1116 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 COA1Q9GZY4 146 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 DBNDD1Q9H9R9 158 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
GAPDH-204ENST00000396859 FZD9O00144 591 aa16.89■□□□□ 0.29
GAPDH-204ENST00000396859 SNAP23O00161 211 aa16.89■□□□□ 0.29
GAPDH-204ENST00000396859 ATP2B3Q16720 1220 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms