RNA–Protein interactions for RNA: ENST00000396205.6

LMO3-205, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 3,534 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-205ENST00000396205 AGBL3Q8NEM8 1001 aa8.38□□□□□ -1.07
LMO3-205ENST00000396205 ZNF277Q9NRM2 450 aaPredicted RBP8.38□□□□□ -1.07
LMO3-205ENST00000396205 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 ZNF280AP59817 542 aaPredicted RBP8.37□□□□□ -1.07
LMO3-205ENST00000396205 FKBP5Q13451 457 aaPredicted RBP8.37□□□□□ -1.07
LMO3-205ENST00000396205 PODNQ7Z5L7 613 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 FAM9BQ8IZU0 186 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 RRAGCQ9HB90 399 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 CREBZFQ9NS37 354 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 CCT4P50991 539 aaKnown RBP8.37□□□□□ -1.07
LMO3-205ENST00000396205 GPSM2P81274 684 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 DNAJC5GQ8N7S2 189 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 ADARB2Q9NS39 739 aaKnown RBP8.37□□□□□ -1.07
LMO3-205ENST00000396205 GPRC5DQ9NZD1 345 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 SRCIN1Q9C0H9 1055 aa8.37□□□□□ -1.07
LMO3-205ENST00000396205 POLLQ9UGP5 575 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 PPIP5K2O43314 1243 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 EPHX2P34913 555 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 MTX1Q13505 466 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 INTS3Q68E01 1043 aaKnown RBP8.36□□□□□ -1.07
LMO3-205ENST00000396205 LARGE2Q8N3Y3 721 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 MTMR14Q8NCE2 650 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 GMLQ99445 158 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 API5Q9BZZ5 524 aaKnown RBP8.36□□□□□ -1.07
LMO3-205ENST00000396205 COA1Q9GZY4 146 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 GGA1Q9UJY5 639 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 ITGBL1O95965 494 aaPredicted RBP8.36□□□□□ -1.07
LMO3-205ENST00000396205 CIAPIN1Q6FI81 312 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 MINPP1Q9UNW1 487 aa8.36□□□□□ -1.07
LMO3-205ENST00000396205 PDS5AQ29RF7 1337 aaKnown RBP8.35□□□□□ -1.07
LMO3-205ENST00000396205 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 CWF19L2Q2TBE0 894 aaKnown RBP8.35□□□□□ -1.07
LMO3-205ENST00000396205 MROH5Q6ZUA9 1318 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 UNCXA6NJT0 531 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 YDJCA8MPS7 323 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 IL1R1P14778 569 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 AOC3Q16853 763 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
LMO3-205ENST00000396205 CNTNAP1P78357 1384 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 ANKRD18BA2A2Z9 1011 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 ELL2O00472 640 aaPredicted RBP8.34□□□□□ -1.07
LMO3-205ENST00000396205 CIAO1O76071 339 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 DDNO94850 711 aaPredicted RBP8.34□□□□□ -1.07
LMO3-205ENST00000396205 IGHMBP2P38935 993 aaKnown RBP8.34□□□□□ -1.07
LMO3-205ENST00000396205 CXCL9Q07325 125 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 GREM2Q9H772 168 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 FAM177BA6PVY3 158 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 LMOD1P29536 600 aaPredicted RBP8.34□□□□□ -1.07
LMO3-205ENST00000396205 RARSP54136 660 aaKnown RBP8.34□□□□□ -1.07
LMO3-205ENST00000396205 UBE3BQ7Z3V4 1068 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 KAZALD1Q96I82 304 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 FOCADQ5VW36 1801 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 RASSF10A6NK89 507 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 ITGA6P23229 1130 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 STRIP1Q5VSL9 837 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 OLFM4Q6UX06 510 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 KLRG1Q96E93 195 aa8.34□□□□□ -1.07
LMO3-205ENST00000396205 FAM205AQ6ZU69 1335 aa8.34□□□□□ -1.08
LMO3-205ENST00000396205 ECE2O60344 883 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
LMO3-205ENST00000396205 DOCK2Q92608 1830 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 UBE4AQ14139 1066 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 DIEXFQ68CQ4 756 aaKnown RBP8.33□□□□□ -1.08
LMO3-205ENST00000396205 ANKRD44Q8N8A2 993 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 VGLL2Q8N8G2 317 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 SEC31BQ9NQW1 1179 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 SUGT1Q9Y2Z0 365 aa8.33□□□□□ -1.08
LMO3-205ENST00000396205 IFIT5Q13325 482 aaKnown RBP8.32□□□□□ -1.08
LMO3-205ENST00000396205 RSBN1LQ6PCB5 846 aaPredicted RBP8.32□□□□□ -1.08
LMO3-205ENST00000396205 USP44Q9H0E7 712 aa8.32□□□□□ -1.08
LMO3-205ENST00000396205 ZNF804BA4D1E1 1349 aa8.32□□□□□ -1.08
LMO3-205ENST00000396205 IPO8O15397 1037 aaKnown RBP8.32□□□□□ -1.08
LMO3-205ENST00000396205 RFX5P48382 616 aaPredicted RBP8.32□□□□□ -1.08
LMO3-205ENST00000396205 FKBP1BP68106 108 aa8.32□□□□□ -1.08
LMO3-205ENST00000396205 ZC3H12CQ9C0D7 883 aaKnown RBP8.32□□□□□ -1.08
LMO3-205ENST00000396205 RIPOR2Q9Y4F9 1068 aa8.32□□□□□ -1.08
LMO3-205ENST00000396205 PPP2R3BQ9Y5P8 575 aa8.32□□□□□ -1.08
LMO3-205ENST00000396205 RPAP1Q9BWH6 1393 aaPredicted RBP8.31□□□□□ -1.08
LMO3-205ENST00000396205 UFL1O94874 794 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 FAM161AQ3B820 660 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 DACT2Q5SW24 774 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 USP17L3A6NCW0 530 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 USP17L4A6NCW7 530 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 USP17L1Q7RTZ2 530 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 COL2A1P02458 1487 aaPredicted RBP8.31□□□□□ -1.08
LMO3-205ENST00000396205 OTOFQ9HC10 1997 aa8.31□□□□□ -1.08
LMO3-205ENST00000396205 SENP3-EIF4A1A0A087X0R7 540 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 GMPSP49915 693 aaPredicted RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 HDLBPQ00341 1268 aaKnown RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 CHRNDQ07001 517 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 TMED8Q6PL24 325 aaPredicted RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 REM2Q8IYK8 340 aaPredicted RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 SUCLG2Q96I99 432 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 WWC3Q9ULE0 1092 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 NSFL1CQ9UNZ2 370 aaKnown RBP8.3□□□□□ -1.08
LMO3-205ENST00000396205 SALL1Q9NSC2 1324 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 TMEM88BA6NKF7 163 aa8.3□□□□□ -1.08
LMO3-205ENST00000396205 PSMD14O00487 310 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms