RNA–Protein interactions for RNA: ENST00000396083.6

THUMPD1-202, Transcript of THUMP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD1, Length 2,624 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-202ENST00000396083 SBF1O95248 1867 aa12.65□□□□□ -0.38
THUMPD1-202ENST00000396083 LMNB1P20700 586 aa12.65□□□□□ -0.38
THUMPD1-202ENST00000396083 CNNM1Q9NRU3 951 aa12.65□□□□□ -0.38
THUMPD1-202ENST00000396083 FER1L6Q2WGJ9 1857 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 PPIP5K2O43314 1243 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 SP8Q8IXZ3 490 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 RTKN2Q8IZC4 609 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 LARGE2Q8N3Y3 721 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 POLLQ9UGP5 575 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 UFL1O94874 794 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 FKBP4Q02790 459 aaKnown RBP eCLIP12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 LRRC24Q50LG9 513 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
THUMPD1-202ENST00000396083 UTYO14607 1347 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 SRGAP3O43295 1099 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 GNAI3P08754 354 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 DOK7Q18PE1 504 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 SOGA3Q5TF21 947 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 DBNDD1Q9H9R9 158 aa12.63□□□□□ -0.39
THUMPD1-202ENST00000396083 PNMA6EA0A0J9YXQ4 647 aa12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 KLRK1P26718 216 aa12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 CHRNDQ07001 517 aa12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 BSDC1Q9NW68 430 aaPredicted RBP12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 ZBTB7BO15156 539 aaPredicted RBP12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 GNAI2P04899 355 aa12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 IARSP41252 1262 aaKnown RBP12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 WASHC4Q2M389 1173 aa12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.62□□□□□ -0.39
THUMPD1-202ENST00000396083 KCNJ4P48050 445 aa12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 RRP1P56182 461 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 MVPQ14764 893 aaKnown RBP12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 TXNRD3Q86VQ6 643 aa12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 TBC1D16Q8TBP0 767 aa12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 RABL6Q3YEC7 729 aaPredicted RBP12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 JDP2Q8WYK2 163 aa12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 KCNQ5Q9NR82 932 aa12.61□□□□□ -0.39
THUMPD1-202ENST00000396083 APBB1O00213 710 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 DDNO94850 711 aaPredicted RBP12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 GGA1Q9UJY5 639 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 COL4A5P29400 1685 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 G3V3G9 751 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 RAD17O75943 681 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 DCAF8Q5TAQ9 597 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 JAG2Q9Y219 1238 aa12.6□□□□□ -0.39
THUMPD1-202ENST00000396083 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 CC2D2BQ6DHV5 1058 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 PSMD1Q99460 953 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 ZC3H12CQ9C0D7 883 aaKnown RBP12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 XDHP47989 1333 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 SNED1Q8TER0 1413 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 METTL24Q5JXM2 366 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 FBXW7Q969H0 707 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 NMRK2Q9NPI5 230 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 ZNF541Q9H0D2 1346 aa12.59□□□□□ -0.39
THUMPD1-202ENST00000396083 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.39
THUMPD1-202ENST00000396083 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.39
THUMPD1-202ENST00000396083 RFX5P48382 616 aaPredicted RBP12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 NIM1KQ8IY84 436 aa12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 DDX19BQ9UMR2 479 aa12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 DUOX1Q9NRD9 1551 aa12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 TMC4Q7Z404 712 aa12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 CRBNQ96SW2 442 aa12.58□□□□□ -0.4
THUMPD1-202ENST00000396083 RTL9Q8NET4 1388 aa12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 ZNF804BA4D1E1 1349 aa12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 MS4A1P11836 297 aa12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 KIAA2012Q0VF49 1180 aa12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 ZBTB12Q9Y330 459 aaPredicted RBP12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
THUMPD1-202ENST00000396083 LTBP3Q9NS15 1303 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 YDJCA8MPS7 323 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 OS9Q13438 667 aaPredicted RBP12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 RRAGCQ9HB90 399 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 EXOC6BQ9Y2D4 811 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 EYA2O00167 538 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 ECE2O60344 883 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 SURF6O75683 361 aaKnown RBP12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 GYG1P46976 350 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 SUPT20HQ8NEM7 779 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 HDAC5Q9UQL6 1122 aa12.56□□□□□ -0.4
THUMPD1-202ENST00000396083 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 CXCL9Q07325 125 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 CEP85Q6P2H3 762 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 TIAM2Q8IVF5 1701 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 MXD3Q9BW11 206 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 ZBTB40Q9NUA8 1239 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 ATP2B4P23634 1241 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 EIF6P56537 245 aaKnown RBP12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 EYA3Q99504 573 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 ANKRD2Q9GZV1 360 aa12.55□□□□□ -0.4
THUMPD1-202ENST00000396083 GLTPD2A6NH11 291 aa12.54□□□□□ -0.4
THUMPD1-202ENST00000396083 DICER1Q9UPY3 1922 aaKnown RBP12.54□□□□□ -0.4
THUMPD1-202ENST00000396083 SCN9AQ15858 1988 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms